Aquipluma nitroreducens: AQPE_0816
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Entry
AQPE_0816 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_0816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_0816
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_0816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
GerE
Sigma70_r4
HTH_38
HTH_40
HTH_23
HTH_36
HTH_28
TnsD
HTH_Tnp_ISL3
DUF6061
SpoIIID
Motif
Other DBs
NCBI-ProteinID:
BBE16673
UniProt:
A0A5K7S555
LinkDB
All DBs
Position
923098..923688
Genome browser
AA seq
196 aa
AA seq
DB search
MKTDNLKTEQEMIALLQKGSIVAFEGLFEQYSQKLYHFSFSYLKSESESEDVVQEVFLKI
WENRAGLKTGTSFQSYLFTIAFNSIRKNFNKKARQNQFRVDLFDFLSIDNSSIENHPDYE
TLLSKLDLLIDQMPARRKEIFLYRKKEGKSVRDIASNMSISPKTVENQITEAMNYLKKEF
DKDRISEMLFFYIFLE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacggacaacctaaaaacggaacaagagatgatagccttattacaaaaaggctcc
attgttgcttttgaaggtttgtttgagcaatacagtcagaaattatatcacttttcgttt
tcatacctgaaatctgaatcagaatcggaggatgtagtccaggaggttttccttaaaata
tgggaaaaccgcgcgggcctgaaaacaggaacatcgtttcaatcctacctgtttaccatc
gcatttaattcgatccgtaaaaacttcaacaaaaaagcccgacagaatcagtttcgggtc
gatttgttcgattttctttcgatcgacaactcatcgatagagaatcatcctgattatgag
actcttttatcgaaattagacttgctgattgatcaaatgcctgcccgaagaaaagagatt
tttctatatcgtaaaaaagaaggaaaatcggtgagagacattgccagcaacatgagcatc
tctccaaaaacagttgaaaatcaaatcactgaagcgatgaattacctaaagaaagaattc
gacaaagaccgcatttcggaaatgttgtttttttacatctttttggagtaa
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