Aquipluma nitroreducens: AQPE_2272
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Entry
AQPE_2272 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_2272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_2272
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_2272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_11
HTH_40
HTH_10
HTH_23
UPF0122
HTH_17
PCI
HTH_24
MarR
HTH_30
HTH_28
HTH_36
HTH_5
DUF1492
TetR_N
Motif
Other DBs
NCBI-ProteinID:
BBE18112
UniProt:
A0A5K7S987
LinkDB
All DBs
Position
complement(2548782..2549360)
Genome browser
AA seq
192 aa
AA seq
DB search
MGVNETKLISDYGLAESIKNSNQGVFELVFNYYYSGLVIYADQIIKDTAISEDIVQSVFM
KLWETRESIEIRSFRSYFIQCVKNRCIDHLRNQQVKHRFDNRIPDANHLVMEEDLWTKNE
LAELIQNAVDDLAPRCREIFWMSRYENLKVAEIAEKLNISKRTVETQISKALKILRVKLV
DYISVLILYFFY
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgggggttaacgaaactaaacttatttcagattacggccttgctgagagcattaaaaac
tccaatcagggagtcttcgaattggtattcaattactattattcggggttggtaatttat
gcggatcagattataaaagatacggcgatatctgaagacattgttcagtcagtttttatg
aaattatgggagactcgggaaagtatcgagattcgttctttccgttcctattttatacaa
tgtgtaaaaaaccgttgtatagaccatcttcgcaatcaacaagtaaagcaccggttcgat
aaccggattcctgacgccaatcatctggttatggaagaagacctttggacaaaaaatgaa
cttgctgaattaattcagaatgctgttgacgatcttgctccgcgttgtcgtgaaatattc
tggatgagtcgatacgaaaacctcaaggtggctgaaattgctgaaaagcttaatatttcg
aaacgaactgttgaaactcagattagcaaagcacttaaaatattacgagttaaacttgtt
gactacatctcggttttgatactctattttttttattga
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