Aquipluma nitroreducens: AQPE_4597
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Entry
AQPE_4597 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_4597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_4597
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_4597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
GerE
Sigma70_r4
HTH_10
HTH_40
HTH_24
HTH_11
HTH_16
HTH_23
HTH_5
SDH_sah
HTH_20
INT_SG_DDX_CT_C
HTH_Tnp_ISL3
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
BBE20405
UniProt:
A0A5K7SFZ1
LinkDB
All DBs
Position
5144339..5144893
Genome browser
AA seq
184 aa
AA seq
DB search
MKELKKGDHFAFEKIFERYSKQLFQFSLSYLKSEEAAEDIVQEVFIKIWNNRKELKTDTS
FQSYLFTIALNSIRKYFNQLSRLNELKHDILFDSSGLKSDFDDRSDYQAMLDKLEELIKQ
MPEKRKEVFIKKKIEEKSLKEISEELNISTKTVEYHITEAMRFLKSEFDKLQIQGLIFFH
LFIG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaattaaagaagggggatcatttcgcttttgaaaaaatatttgaacgatatagt
aagcaattgtttcaattctcattgagctacttaaagtcagaagaagcggctgaagatatt
gtacaggaagtttttattaaaatctggaacaatagaaaagaactaaaaacggatacgtct
ttccaatcttacctgtttacaatagcgcttaactcaatccgtaaatattttaatcaactt
tcaaggttaaacgaattaaagcatgatattttatttgattcatctggactcaaatctgat
ttcgatgaccgttccgattatcaggcaatgttggataaactggaggaattgattaaacag
atgcctgaaaaacgcaaggaagttttcatcaaaaagaagatcgaagagaaatcgctgaaa
gaaatttctgaagaattaaatattagcacgaaaacggtggaataccatattactgaagcc
atgcgatttttaaagagtgagtttgataaactacagattcaaggtttaatattctttcat
ctttttattggttaa
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integrated database retrieval system
