Aspergillus niger (black aspergilli): An08g06050 Help Entry An08g06050        CDS       T01030                                  Name (RefSeq) uncharacterized protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism ang  Aspergillus niger (black aspergilli) Pathway ang03013   Nucleocytoplasmic transport ang03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ang00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     An08g06050    03015 mRNA surveillance pathway     An08g06050  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ang03019]     An08g06050 Enzymes [BR:ang01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      An08g06050     5.6.2.5  RNA 5'-3' helicase      An08g06050 Messenger RNA biogenesis [BR:ang03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      An08g06050    mRNA cycle factors     Common to processing body (P body) and stress granule      An08g06050 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD UvrD-helicase SLFN-g3_helicase Helicase_RecD PIF1 nSTAND3 AAA_22 AAA_16 ATPase AAA Motif Other DBs NCBI-GeneID:  4982921 NCBI-ProteinID:  XP_001392719 UniProt:  A2QRH3 LinkDB All DBs Position VIII AA seq 1072 aa AA seqDB search MAALGDDRIPPEMDDAASQFRPRRHDDDDDASGDDDVESTTSAQAADNKNHQGHFEEEKE LPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLG DTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIEDRS FLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFSDLEKATAVDDEPAPVLLRY DDAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVK LAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTAD YVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELN GSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCE RIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRINDTNIELIKLNQLKAELGELSSQDE KRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVL GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFP SNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSNLGNEEISASGTSYLNRTEATN VEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGR EKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHF KERHCLVEGPLSNLQESLIQFSRPKQAYRGPQRFQMAYNHASNVTSGLMNGRNGQRNDFH DTGSVVGYIPDDVSSVHSSALGGVGIPSGYPPMFQNFADAWPALPGARRANGNRMKGAPS IAGESVAATESDVTGSIIDGKSVDQGGVSLAGLSINDMGKQPSLSQSDRLKRYVESGGRE PYKPGVPDNGSIFGGSSASIRVTRGVPGHIHDDDDTRSVSTAFASQVGGNYD NT seq 3219 nt NT seq  +upstreamnt  +downstreamnt atggcggcacttggcgatgacaggattccgccggagatggacgacgcagcttcccagttt cgcccgcggagacatgacgatgacgatgatgcttccggagacgacgatgtagagagcaca actagtgctcaggcagccgacaacaagaatcatcaggggcattttgaggaggagaaggaa ctcccgccacatgcatgcgcgtattgcggcattcataacccgagcagcgtagtcaagtgc ctggcctgcagcaagtggttctgcagcgcccgcggtaacacctcgtcctcccatattgtc aatcacctcgttcgggcccgccacaaggaagttcagttgcatccggcctcatcgcttggg gatacgatattggaatgctacaattgcgggactaagaacgtgttcctgcttggattcatt ccggccaagtctgacacggtcgtcgtattgctatgccgtcaaccatgcgccgctatgcca tcttctaaggatatgaactgggatacttcccgctggcaaccgttgattgaagaccgttcg ttcttgccatggctggttgctgcgccgtccgaccaggaacagctccgcgctcgccacctc agtccgcagttgattgctaagctggaagagatgtggaaggaaaattctcaagcgactttc tcggatttggagaaggccacggctgtggacgatgagccagcacctgtgcttctgcgttat gatgatgctttccagtatcagaacatttttgggcctttggtcaagatcgaggccgactat gaccgcaagttgaaggaatcccaatcgcaggatggactgatcgtgcgctgggaccttggt ctcaacaacaagcatctggctagcttcattttgccgaaacttgaacttggcgatgttaaa ttggccgtgggagatgaaatgcgcctcaagtataccggcgaactgcggcccaaatgggag ggagttggatatgtcattaaaattccgaacaaccagtccgatgaagtgacgattgagttg cgcgcaaagggtgatcataagtctgtgcctacagagtgcacgcacaatttcacagctgac tacgtctggaagtctacatcatttgatcgtatgcagctggctatgaaaacatttgccgtg gatgagatgagtgtgtctggttacattttccatcgccttctcggacacgaagtcgcagcc gcgccgatgaagacccaaatgccgaagaagttcagcgttccgggacttccagaactcaac ggtagtcagattaacgctgtgaagagcgtgctgcagagaccattgagtttgattcaagga cctccgggaacgggaaagactgtgacctcggctacgatcatctaccatcttgcgaagatc aacggtggtcaggtgttggtgtgcgccccctcgaacgttgcggttgaccaactttgtgag cgtatccatcggacaggtctgaagactgtgcgtgtgacagctaaatcgcgagaggacgtt gaatcgccggttggcttcttgtccttgcacgaacaagtccgcatcaacgataccaacatc gaactcattaagctcaatcagctcaaggccgagcttggagagttgtccagtcaagatgag aaacgactgaaacagctaacccgctcggcggagcgcgagatcttgaataacgccgacgtt atctgctgtacttgcgttggtgctggtgatcctcgtctggcgaagctcaagttccgtacc gtcctgattgacgaatcgacccagtcggctgagccagaatgtatgattcccttggttctc ggatgcaagcaagtagtccttgtcggcgatcaccaacagctgggacctgtcatcatgaac aagaaggcagccaaggctggtcttaaccagtcactctttgaacgtctcgtcattcttggc tgctcccctattcgtcttaacgttcagtaccgtatgcacccgtgcctgtcggagttcccg tcgaacatgttctatgaaggttctctacagaacggtatctcttcgtttgagcgtctccgc cgtgatgtcgacttcccctggcccattgccgataaccctatgatgttctggtcgaacctg ggtaacgaggagatttcggcctccggaacctcttaccttaaccgcactgaagccacgaac gtggagaaaattgtcacccgcttcttcaaagctggagtgcagccccaggacattggtatc atcactccttatgagggtcagcgcagctacattgttagctctatgcaagctaatggcacc tttaagaaagagcattacaaggagatcgaggtggcttcggtcgatgccttccagggtcgt gagaaggacttcattatcctttcttgtgtgcgttcaaacgaccaccagggtattggtttc ttaagtgatcctcgccgtctcaacgtcgctctcactcgtgccaagtatggcctggccatc cttggaaacccgaaggtcttgtcgaagcatcctttgtggaactgtctcctgcagcatttc aaggaaaggcactgcctggttgagggacccttgtctaacctgcaagagtctttgatccaa ttcagccgacctaagcaggcataccggggtccccagcggttccagatggcttacaaccat gcttctaatgttaccagcgggttgatgaatggaaggaacggtcagcgcaatgacttccat gacaccggctcagtggttggttacatccccgatgatgtctcttccgtccactcctctgcc ctgggcggggttggcattccctctggttatcctcccatgttccagaatttcgcggacgcg tggcccgctcttcccggagcccgtcgggccaatggtaaccgtatgaagggagcacctagc attgccggagaatctgtggcagccaccgagtccgatgttactggaagcatcattgatggg aagagcgtcgaccaaggtggtgtcagccttgctggcttgagcatcaacgatatgggcaag cagcccagtctcagtcagtccgatcggctgaagcgctacgtggaatccggaggccgggag ccttacaagcccggtgttcccgataacggcagcatttttggcggaagctctgctagcatt cgtgtcactcgtggtgtgccaggccacattcacgatgacgatgatacgcgcagtgtttcg actgcattcgccagtcaggttgggggcaactatgattga

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