Aminobacter niigataensis: AMD1_1250
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Entry
AMD1_1250 CDS
T09606
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00521
Streptomycin biosynthesis
anj00523
Polyketide sugar unit biosynthesis
anj00541
O-Antigen nucleotide sugar biosynthesis
anj01100
Metabolic pathways
anj01110
Biosynthesis of secondary metabolites
anj01250
Biosynthesis of nucleotide sugars
Module
anj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
AMD1_1250 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AMD1_1250 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AMD1_1250 (rfbC)
Enzymes [BR:
anj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
AMD1_1250 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAI2932532
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All DBs
Position
AMD1:1206153..1206716
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AA seq
187 aa
AA seq
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MVEVRELGLDGVCEIQPAKIEDARGFFSETWNAAKLAHAGIAVDFVQDNQSFSRARGVMR
GLHFQTPPFAQDKLVRVLRGSIFDVAVDIRKGSPSFGNWVGLTLSDKDWNQILVPKGFAH
GFVTLEPNTEVVYKVSAPYSQPHDRSIRFDDPDIGIEWPLAAAEMVLSSKDATAPYLAEV
ETGFVYA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggtgcgagagctcgggctggatggtgtttgcgagatccagccagccaagatc
gaggatgcgcgcgggttcttttccgagacatggaacgcggcaaaactggcgcacgccggt
atcgcggtggactttgtgcaagacaaccaatccttttcgcgggctcgcggcgtgatgcgg
gggttgcatttccaaacgccacccttcgcgcaggacaagctggtgcgcgtgctgcggggg
tcgatcttcgacgttgcggtcgacataagaaaaggttcgccgagcttcggcaactgggtc
gggctgaccctctcggacaaggactggaaccagatcctggtgcccaaggggttcgcgcac
ggctttgtcacactcgagccgaacaccgaggtcgtctacaaggtttctgccccttattcg
cagccgcatgaccggtcgatccgcttcgacgatcccgacatcgggatcgaatggccgctg
gctgccgcggagatggtgctgtccagcaaggacgcgacggcaccctatctggccgaagtc
gaaaccgggttcgtatacgcatga
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