Aminobacter niigataensis: AMD1_1538
Help
Entry
AMD1_1538 CDS
T09606
Name
(GenBank) ATP-dependent DNA ligase clustered with Ku protein, LigD
Organism
anj
Aminobacter niigataensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
CAI2932820
LinkDB
All DBs
Position
AMD1:complement(1459069..1461522)
Genome browser
AA seq
817 aa
AA seq
DB search
MAAEKLRTYRQKRDFSRTREPPGALAGHDGNRFVVHKHHATADHYDLRLELGGVLKSWAV
PRGPSLNPADKRLAVETEDHPIEYIDFEGLIPEGEYGGGPMIVWDTGVWAPMEDAEKALA
KGAFKFRLSGEKLKGGWMLARLKPKPDENKHNWLLFKEHDPAADEKLDILQARPESVKTG
RLIEELAGPPKKPPSKPADLKPGKLAGAVRAPMPARIEPQLATAAPKPPSGEGWLHEIKF
DGYRTMVHLEGGTAKLITRSGIDWTKRYGKLAAAFRDLPCSEAVIDGEIVVLDDKGISRF
AALQDALASGHDELLVFYAFDLLHLNGWNLTGTELSKRKGMLETLLAGHVDGRSALQLSG
HVEGDGQALYDQATEMGLEGVVSKRASAHYTSGRSHSWSKTKALDKDDFVIAGYTTSQAA
EGLAALALGEWVDGELQYRGKVGTGFDAETLQSLLHRLEALREGADKLDGAPKEVIPVRP
VLNAHIHYANRTTDNALRHAVFKGLREAELTASAAAPRKRLISDADLAGISITNPTRRVL
GKAGPTKLDVAVYYAAIGDFMLPHILGRPVSLFRCPSSRPQDCFFQRHAFSGMPPTIASF
DTKNSEGETKSYISVEDAKGYLALAQFGVVEFHAWGALRKHLDKPDRVVFDLDPGEGIGW
REVVEAAVHVRSELEKLGLVPFVKTSGGRGIHVVVPTTGKLGWKPFHQASSEISSLIAAT
APETFTTVMGKDNRKKRIFIDFHRNARSATAAAPYSLRARTGMPASTPLGWNDLESIDAP
EDLNYSSLPGLVARSGDPWADIGDHARDLTTAISAKR
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggaaaagcttcgcacctaccggcagaagcgcgatttctccaggacgcgggaa
ccacctggcgcgttggcaggccacgatggcaaccgcttcgtcgtccataagcaccatgca
acggccgatcactacgacctgcgcctcgaactgggcggtgtgctgaaaagctgggccgtg
ccgcgcggcccctcgctcaaccccgccgacaagcggcttgccgtcgagaccgaggaccac
ccgatcgaatatatcgacttcgagggcctgatccccgagggggaatatggcggcgggccg
atgatcgtctgggacaccggcgtctgggcgccgatggaggatgccgaaaaggcgcttgcc
aagggcgccttcaagttccgcctgtcgggcgaaaagctgaagggcggctggatgctggcg
cggctgaagccgaagcccgacgagaacaagcacaactggctgctgttcaaggagcatgac
cccgccgccgacgagaaactcgatatcctccaggcacgccccgaaagcgtgaagaccggc
cggctcatcgaggaactggccggtccgccgaaaaagccgccatcgaagcccgccgacctc
aagcccggcaagcttgcgggtgcggtgcgggcaccgatgccggcgcggatcgaaccgcag
ctggccacagcggcgcccaagccgccgtcgggcgagggttggcttcacgagatcaagttc
gacggctatcgcaccatggtgcatctcgaaggcggcacggcaaagctgatcacccgcagc
ggcatcgattggacgaagcgctacggcaagctcgcggcggcctttcgcgacctgccgtgc
agcgaagccgtcatcgatggcgagatcgtggtgctcgacgacaagggcatcagccggttt
gcggccttgcaggacgcgctggccagcgggcatgacgagctcctggttttctacgccttc
gaccttctccatctcaatggctggaacctgacgggcacggaactcagcaagcgcaagggc
atgctggaaacgctgcttgccggccatgtcgacggccgctcggcgctgcagctcagcgga
catgtcgagggcgacggccaggcgctgtatgaccaggcgaccgaaatggggctcgagggt
gtggtgtccaagcgggcctcggcacattacacctccggacgctcgcacagctggtccaag
accaaggcactggacaaggacgacttcgtcatcgccggctacacgacatcgcaggcagcc
gaagggcttgcggccctcgctctcggcgaatgggtcgacggcgagctgcaatatcgcggc
aaggtcggaaccggcttcgacgctgagacgttgcagtcattgctgcaccggctggaagcc
ctgcgggaaggtgcggacaagctcgatggtgcgccgaaggaggtcatcccagtgcgtccg
gtattgaacgcccatatccactatgccaaccgcaccaccgacaacgcgctgcggcacgcc
gtgttcaagggcctgcgcgaggcggagctcaccgcgagtgccgccgcgccgcgcaagcgg
ctgatctcggatgccgatctcgccggcatttcgatcaccaatccgacgcggcgggtgctc
ggaaaggccgggccgaccaagctcgacgtcgcggtttattacgccgccatcggcgatttc
atgctgccccacatcctggggcggccggtatcgctgttccgctgtccgagcagccggccg
caggactgcttcttccagcgtcacgccttttcaggcatgccaccgacgatcgcttcgttc
gacaccaagaattccgagggcgagaccaagagctacatatcggtcgaggacgccaagggc
tatctcgcgctggcgcagttcggcgtcgtcgagttccacgcctggggcgccctgcgcaag
catctcgacaagcccgaccgtgtcgtcttcgacctcgatcctggcgaaggcatcggctgg
cgcgaggtcgtggaggccgccgttcacgtgcgcagcgagctggaaaagctcggtctcgtg
cctttcgtcaagacatccggcgggcgcggcatccatgtcgtggtgccgaccaccggtaaa
ctcggctggaagccattccatcaggcaagcagcgaaatctcgtcgctgattgcagccacc
gccccagagactttcaccaccgtcatgggcaaggacaaccgcaagaagcgcattttcatc
gacttccaccgtaatgcgcgcagtgcaacggcggccgcgccctattctcttcgggcacgc
actggcatgcctgcttcgacacctcttggctggaacgatctcgagtccatcgacgctccg
gaagatttgaactattcttcgcttcccggcctcgtggccaggtcaggcgatccctgggcg
gacatcggcgaccacgcccgcgacctgacgactgcaatcagtgccaaacgttag
DBGET
integrated database retrieval system