Anaeromyxobacter sp. K: AnaeK_0832
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Entry
AnaeK_0832 CDS
T00748
Name
(GenBank) DNA ligase D
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ank
Anaeromyxobacter sp. K
Pathway
ank03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ank00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AnaeK_0832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ank03400
]
AnaeK_0832
Enzymes [BR:
ank01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AnaeK_0832
DNA repair and recombination proteins [BR:
ank03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AnaeK_0832
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_C
DNA_ligase_A_M
DNA_primase_S
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ACG72068
UniProt:
B4UEC1
LinkDB
All DBs
Position
complement(943122..945176)
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AA seq
684 aa
AA seq
DB search
MPARPAGARRGRRLPRHAGGGELSRVARAPVPTYRAQLATLVAAPPAGGGWVHETKYDGY
RIGCALEGGRATLWSRRGNDWTAQFPEVARAAEALPARSALLDGEVAAVLPGGRTSFQAL
QQAFSGGRRSLAYFVFDLLWLDGEDLSGRPLRERKDALRRLLGARGAVLRYAPHVEAPGA
EVLREACRLGLEGIVSKRADAPYRPGRNTTWTKAKCLARQELVIGGFTDPEGSRQGIGAL
LVGFHEGGALRFAGKVGTGFTQASARALRARLDRLERADPPFTPRPPGALGRIAHWVRPE
LVAEVAFTEWTDDGKVRHPSFQGLREDKRAADVVREVPGAGAPPAPPAPPAPAPAPTAAG
RARRRAAAGAAGEVVIGGVRLSHPERTMFPGEGRAALTKADVARYYDAVAGAMVPHLRGR
PLTLFHCPEGITGACRFMKHSKTWAPPAVRRIRIQEKTKVGEYLIADDRAALLALVQMDV
LELHTWNSTVEALEQPDRIVLDLDPGPEVPWREVVRAARLLRSALEALGLAAFVKTTGGA
GLHVVTPLVPRRRWEDCLAFARGLAATVARHEPRAFTVAFARAGRERRILLDYLRNNRTN
TSVAAFSLRARPGAPASVPVAWDELGPRLRPERLDARTVPRRLARLGADPWAGWARAARP
LGDAHLAAVGAAPVDEPARGGGRR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccgccccgccggcgcccgccgggggcgccgcttgccccgccacgccgggggt
ggtgagctttcccgcgtggcccgcgcgcccgtcccgacctaccgcgcccagctcgcgacg
ctcgtcgcggcgccgccggcgggcggcggctgggtccacgagacgaagtacgacggctac
cggatcggctgcgcgctggagggcgggcgcgccacgctctggagccggcgcggcaacgac
tggaccgcgcagttccccgaggtggcgcgggcggccgaggcgctgccggcgcggagcgcg
ctcctcgacggcgaggtggcggcggtgctgcccggcggccggaccagcttccaggcgctc
cagcaggcgttctccggcggccgccgctcgctcgcctacttcgtgttcgatctgctctgg
ctggacggcgaggacctgtccgggcggccgctgcgcgagcgcaaggacgccctgcgccgg
ctcctcggcgcgcgcggcgccgtgctccggtacgcgccgcacgtggaggcgcccggcgcc
gaggtgctccgcgaggcgtgccgcctcggcctggaggggatcgtctcgaagcgcgccgac
gcgccctaccggcccgggcggaacaccacctggacgaaggcgaagtgcctcgcgcgccag
gagctggtgatcggcgggttcaccgatcccgagggcagccgccagggcatcggggcgctg
ctggtgggcttccacgagggcggcgcgctgcgcttcgccgggaaggtcggcaccggcttc
acccaggcgtcggcgcgggcgctgcgcgcgcgcctcgaccgcctggagcgcgccgacccg
ccgttcacgccgcggccgcccggcgcgctcgggcggatcgcgcactgggtgcggccggag
ctggtggccgaggtggcgttcaccgagtggaccgacgacgggaaggtgcgccacccgtcg
ttccaggggctgcgcgaggacaagcgcgccgcggacgtggtgcgcgaggtccccggcgcc
ggcgcgccaccggcgccgccggccccaccggcgcctgcgcccgcgccgaccgccgcgggt
cgcgcccggcgccgcgcggcggcgggcgccgccggcgaggtggtgataggcggcgtccgg
ctctcgcacccggagcgcaccatgttcccgggcgaggggcgggccgcgctcacgaaggcc
gacgtggcccggtactacgacgcggtggccggcgcgatggtgccgcacctgcgcggccgc
ccgctcaccctgttccactgcccggagggcatcaccggcgcgtgccgcttcatgaagcac
tcgaagacctgggcgccgcccgccgtgcgtcggatccgcatccaggagaagaccaaggtg
ggcgagtacctgatcgccgacgatcgcgccgcgctgctcgcgctcgtgcagatggacgtc
ctcgagctgcacacctggaactcgacggtggaggcgctggagcagccggaccggatcgtg
ctcgacctcgacccgggaccggaggtcccgtggcgcgaggtggtgcgcgcggcgcggctg
ctgcgctcggcgctggaggcgctgggcctcgccgcgttcgtgaagaccaccggcggcgcg
gggctgcacgtggtgacgccgctggtgccgcggcggcgctgggaggactgcctcgcgttc
gcgcgcgggctcgccgccacggtggcgcgccacgagccgcgcgcgttcacggtggcgttc
gcgcgcgccgggcgcgagcggaggatcctcctcgactacctgcggaacaaccggaccaac
acctcggtggccgcgttctcgctgcgcgcgcggccgggcgcgcccgcctcggtgccggtg
gcctgggacgagctggggccgcggctgcgaccggagcgcctggacgcgcggaccgtcccg
cgacggctggcgcggctcggcgcggatccgtgggccggctgggcgcgcgccgcccggccg
ctcggcgacgcgcacctcgccgcggtgggcgccgcgccggtggacgagccggcgcggggc
ggggggcggcggtga
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