Amygdalobacter nucleatus: PYS63_03585
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Entry
PYS63_03585 CDS
T09414
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
anq
Amygdalobacter nucleatus
Pathway
anq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
anq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PYS63_03585 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anq03400
]
PYS63_03585 (uvrB)
DNA repair and recombination proteins [BR:
anq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYS63_03585 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PYS63_03585 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
AAA_30
AAA_22
SWI2_SNF2
UVR
Flavi_DEAD
AAA_33
Motif
Other DBs
NCBI-ProteinID:
WEG36261
LinkDB
All DBs
Position
788611..790773
Genome browser
AA seq
720 aa
AA seq
DB search
MTDTSWMETEISLTDLHAKNKKQSQPFKLVSKYQPTGDQPAAINKICASIQAGNRFQTLV
GVTGSGKTFTMANVIQKLQRPTLVLAHTKTLAAQLCAEFKALFPENAVEYYVSYYDYYQP
ESYVARTDTYIEKDASINEDIDRLSHLAVSSILERNDVIIVATVSCIYGLISPLDYVNLT
LPIKVGQIKPIKDIVTKLISIQYVRDDFDFKRGAFRLRGDTLDIFPIESENMYIRIKFFD
DEVESISEMQALNNNVISKRTFVSINPASRYLVREEAIKEAIPNIQAELQARLAELQNTG
KIVEAYRLEQRTNYDLAMMQETGFCKGIENYSRHLSQRLPGSAPYTLVDFFPDDFLLMID
ESHMTIPQLGAMYLGDHSRKQALVDYGFRLPSCLDNRPLTKDEFWQKIKQALFVSATPGD
FEHENSVTFAEQIIRPTGLLDPEIEIHPEKDQIAYALSQINLRIERNERTLLLTTTKRLA
EEISEHLKKNGIKAAYIHADVPNQKRSEILRDLRIGKYDVLIGINLLREGIDLPEVSLIG
IFDADKQGLSRSTTSLIQIIGRASRNAHGHVILFADTVSESMLEAITETNRRRQIQQAYN
AEHHIVPKTVQKGVRELLSTKLDTRESETEYKARKANQRRKKQVLDLAGVDNNEEHSFMS
KLEISEHYAELIKAYQVATKEEQTMFGQQIEQVQKQAINDLDFETAAKMRDLKALLDVSI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacaagttggatggaaactgaaattagcttgacagacttgcatgctaagaac
aaaaagcagagccagccatttaaacttgttagtaagtaccaaccaactggtgaccagcca
gctgccattaacaaaatttgcgcgtccattcaagctggcaatcgtttccaaacccttgta
ggtgtaactggttcaggtaaaacatttaccatggctaacgtcatacagaagctacaacgc
ccaactctagttttggctcatactaagactctggctgcccagctttgtgctgaatttaag
gcacttttccccgaaaatgccgttgaatattacgtatcttattacgactactatcagcca
gaatcatatgtggcgcggacagatacttatattgagaaagacgcctcgatcaacgaagac
atcgatcgcctgagccacctagctgtgagcagcattttggagcgtaatgacgtcatcatc
gtggccaccgtttcctgtatctatggcttaatttcaccattagactatgtcaatttaacc
ttaccgattaaagtcgggcagattaaaccaatcaaggatatcgtgactaaattaatcagc
attcagtatgtgcgtgatgattttgatttcaaacgtggcgcttttaggctgcgtggcgat
actttggatattttcccaattgaatcagaaaatatgtatattcgcatcaaattttttgat
gatgaggtagagagtatctctgagatgcaagcgctcaataacaatgttatcagcaagcga
acttttgtcagcattaacccagccagtcgttatttagttagggaagaagcaatcaaagaa
gctatccctaatattcaagctgaattacaagcaagattagctgaattacagaatactggc
aaaattgtggaagcttatcgtttggaacaacgcacaaattacgatttggccatgatgcaa
gaaactggtttttgtaagggcattgagaattattccagacatctaagtcaacgcttgcca
ggctcggccccatatacattggtggatttctttcctgatgattttcttttgatgattgat
gagtcgcacatgactattcctcagttaggtgccatgtatctaggcgaccactcacgcaaa
caagcccttgttgattatggctttcgtttgccatcttgcttagataatcgccctttaacc
aaagatgagttttggcagaagattaagcaggcattgttcgtttcagctacaccaggggac
ttcgaacacgaaaactcagtcacctttgctgaacagatcattcgcccaactggtctctta
gatccagagattgaaattcatccggaaaaagatcagattgcttacgctcttagccagatt
aatttgcgaattgaacgtaatgagcgcacattattgttgacaacgactaaacgcttagct
gaggaaattagcgagcatttgaagaaaaacggcattaaggcagcttatattcatgccgat
gtgccgaatcagaaacgtagcgaaattttgcgtgatttacgaataggcaaatatgatgtc
ttaattggtatcaaccttttaagagaaggtatcgacttacctgaagtatcgttaattggc
atttttgatgctgacaaacagggcttatcgcgttcaaccacttctttgatccaaattatt
ggccgtgcatccagaaatgcgcatggacatgttattttgtttgcagatactgtttctgaa
tctatgttagaggcaattacggaaactaatcgtcgtcgccaaattcagcaagcttataat
gctgaacaccacattgtgcccaagactgtacaaaaaggtgtgcgtgaacttcttagcacc
aagttggatacacgagagtctgagactgaatacaaagcccgtaaagcaaatcagcggaga
aagaaacaagtgcttgatttggctggcgttgataacaatgaagaacatagcttcatgtcg
aagcttgaaattagtgaacactatgctgagctgatcaaagcttaccaagtggcaactaaa
gaagaacaaactatgtttggacagcagatcgaacaggtccagaaacaagctatcaatgat
ttggactttgaaacagctgcgaagatgcgagatttaaaagccttgttagatgtttctatc
tag
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