Amygdalobacter nucleatus: PYS63_04385
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Entry
PYS63_04385 CDS
T09414
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
anq
Amygdalobacter nucleatus
Pathway
anq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PYS63_04385 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anq03400
]
PYS63_04385 (ruvB)
Enzymes [BR:
anq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYS63_04385 (ruvB)
DNA repair and recombination proteins [BR:
anq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PYS63_04385 (ruvB)
RecFOR pathway proteins
PYS63_04385 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Sigma54_activ_2
AAA_16
nSTAND3
Mg_chelatase
TIP49
AAA_14
DUF815
RNA_helicase
NTPase_1
Resolvase
AAA_3
AAA_22
Bac_DnaA
NB-ARC
AAA_18
TsaE
NACHT
AAA_24
AAA_17
AAA_25
IstB_IS21
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
WEG36400
LinkDB
All DBs
Position
complement(953246..954496)
Genome browser
AA seq
416 aa
AA seq
DB search
MAKNPEIEGNYDLPDTLPDLIQSSYLKQSKPESKKPKQPKQAVPESIETNYKIEETSQFS
ADDESQLVSRCKQYTDKDENQLRPLTWEAYCGQNKLKEKLQIYIQAAKERNECLDHVLLY
GPPGLGKTTLAGIIAHEMQANLRITSGPALEKAGDLAALLTSLKEGDILFIDEIHRLSRQ
VEEVLYPAIEDFSLDVIIGKGPGARSIRLDLPKFTLIGATTRAGLLSSPLRDRFGVIEQL
QLYNEADLAQIIERACRILHLEINEAGQHDIARRSRGTPRIALRLLRRVRDFAQIKGNGL
ITAEIADYALDKLEIDKLGLDASDRKLLNVLATNYDGGPCGLETLAAALNEDASTLEDVN
EPYLMQIGFLAKTARGRVLTTGAWQYLRLTPGTNKTGTNSKATIKQLDWLEIEKDA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaatccagaaattgagggcaattatgatttaccggacactttgcctgattta
attcaatcaagctatttgaaacagtctaaacctgaatctaaaaagccaaaacagcctaag
caagctgtgcctgaatcgatagaaactaattataagatagaggagacaagccaatttagc
gctgatgatgaaagtcagcttgtaagtcgctgcaagcaatacactgacaaagatgaaaat
caactcagaccacttacctgggaagcttattgtggtcagaataagttgaaagagaaattg
caaatttacattcaagctgctaaggaacggaacgagtgcttggaccatgtcttgttatat
ggcccaccaggcttaggcaagacgactttagcaggtattattgcgcacgagatgcaagct
aatttgcgaattacaagtggccctgctttggagaaagcgggcgatttagcagccttactc
acttcattaaaagagggagatattctctttatcgatgaaattcaccgcttaagtaggcag
gtggaagaggttttgtatccagctattgaagacttttctttggatgtgattatcggaaaa
ggcccaggcgcgcgctctattcgcctggatttgcccaaattcaccttgattggcgcaaca
actagagctggtttactatcttcaccgttaagagataggtttggtgttatagagcaattg
cagctttataatgaggctgatttggcgcaaattattgagcgagcatgtcgaattttgcat
ttggaaattaatgaggcaggccagcatgatatagctagacgctctaggggaacaccacgt
attgccttaagacttttgagacgtgtacgtgactttgcccagattaagggtaatggtcta
atcacagctgaaatagctgactatgcgcttgataaacttgagattgacaaattaggctta
gatgccagcgatcgcaaactgttgaatgtacttgcaacgaactatgacggtggcccttgt
ggcttagagacattggcagctgctttgaatgaagatgctagcacgcttgaagatgtgaat
gagccttaccttatgcaaattggcttcttagccaaaactgctcgtggccgtgtcctaacg
acaggcgcttggcaatatttgcgtctcacacctggaacgaacaagacaggtactaatagt
aaggccacaattaaacaattagattggttggaaatagaaaaagatgcctaa
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