Arvicanthis niloticus (African grass rat): 117693330
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Entry
117693330 CDS
T08817
Symbol
Cacna2d2
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04010
MAPK signaling pathway
anu04260
Cardiac muscle contraction
anu04261
Adrenergic signaling in cardiomyocytes
anu04921
Oxytocin signaling pathway
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117693330 (Cacna2d2)
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
117693330 (Cacna2d2)
09153 Circulatory system
04260 Cardiac muscle contraction
117693330 (Cacna2d2)
04261 Adrenergic signaling in cardiomyocytes
117693330 (Cacna2d2)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117693330 (Cacna2d2)
05412 Arrhythmogenic right ventricular cardiomyopathy
117693330 (Cacna2d2)
05414 Dilated cardiomyopathy
117693330 (Cacna2d2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117693330 (Cacna2d2)
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117693330 (Cacna2d2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
dCache_2
T6SS_FHA_C
Cache_3-Cache_2
DUF5610
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117693330
NCBI-ProteinID:
XP_034339765
EnsemblRapid:
ENSANLG00005019727
LinkDB
All DBs
Position
21:27582526..27714533
Genome browser
AA seq
1158 aa
AA seq
DB search
MAVPARTCGASWPGPVRTARPWPGRGPQPCPDPRGPASGPARPLLLLLPPLLLLPLLTAP
GASAYSFPQQHTMQHWARRLEQEIDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVE
KVAGDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDITYYDAKADAELDDPESED
MERGSKTSALRLDFIEDPNFKNKVNYSYTAVQIPTDIYKGSTVILNELNWTEALENVFIE
NRRQDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGASSPKDMVIIVD
VSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQANVRNKKVFK
EAVQGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMFTDGGEDRVQDVFEKYNWP
NRTVRVFTFSVGQHNYDVTPLQWMACTNKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAG
KDAKQVQWTNVYEDALGLGLVVTGTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRL
TPNYTLGANGYVFAIDLNGYVLLHPNLKPQVRQTTNFREPVTLDFLDAELEDENKEEIRR
SMIDGDKGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNYSLGLVLPPYSTYYLQANLS
DQILQVKLPISKLKDFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKNFIELMEK
VTPDSKQCNNFLLHNLILDTGITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKA
AEDWTENPEPFNASFYRRSLDNHGYIFKPPHQDSLLRPLELENDTVGVLVSTAVELSLGR
RTLRPAVVGVKLDLEAWAEKFKVLASNRTRQDQPQKQCGPSSHCEMDCEVNNEDLLCVLI
DDGGFLVLSNQNHQWDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLG
AAPRGVFVPTIADFLNLAWWTSAAAWSLFQQLLYGLIYHSWFQADPAEAEGSPETRESSC
VMKQTQYYFGSVNASYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPLCSQCEAGRLLQK
ETHSDGPEQCELVQRPRYRRGPHICFDYNATEDTSDCGRGASFPPSLGVLVSLQLLLLLG
LPPRPQPQVHSFAASRRL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccggctcggacctgcggcgcttcttggcccggcccggtgcggaccgctcgg
ccctggccgggtcgcggcccccagccctgccctgacccccggggcccagcgtccgggccc
gcacgcccgctcttgctattgctgccgcctctgctgcttttaccgctgctcaccgccccc
ggcgcctctgcctacagcttcccccagcagcacacgatgcagcactgggcccggcgcctg
gagcaggagattgacggtgtgatgcggatttttggaggcgtgcagcagctcagagagatc
tacaaggacaatcggaacctgtttgaagtgcaggagaatgaaccacagaaattggtggag
aaggtggcaggggacattgagagcctgctggacaggaaggtccaggccctgaagagactg
gctgatgctgcagagaatttccagaaagcccaccggtggcaggacaacatcaaggaggaa
gacatcacgtactatgacgccaaggctgacgccgaactggatgaccctgagagtgaagat
atggagaggggatccaagaccagtgccttaaggctggacttcatcgaggacccaaacttc
aagaacaaagtcaactattcatacacggctgtgcagatccccacagacatctacaaaggc
tctaccgtcatcctcaatgagcttaactggacagaggccctggagaatgtcttcattgag
aaccgaaggcaagaccctacattgttgtggcaagtcttcggcagtgccacgggagtcacc
cgctattacccagccacaccatggagagcccccaagaagattgacctatacgatgtcaga
agacgaccctggtatatacagggggcttcatcacccaaggacatggtcattattgtggat
gtgagcggcagtgtgagtggcctgacgctgaagctgatgaagacatccgtctgtgagatg
ttagacacactctccgatgatgactatgtgaacgtggcctcattcaacgagaaggcgcag
cctgtgtcttgcttcacacacctggtgcaggccaatgtgcgtaacaagaaggtgttcaag
gaagctgtgcagggcatggtggccaagggcaccacaggctacaaggccggctttgagtat
gcctttgaccagctacagaattccaacatcacgagggccaactgcaataagatgatcatg
atgttcacggatgggggtgaggaccgagtgcaggatgtctttgaaaagtataattggccc
aatcggacggtacgcgtgttcacgttctccgtgggacagcataactatgacgtcacaccc
ctgcagtggatggcctgtactaacaaaggttactattttgagatcccttccatcggcgcc
atccgcatcaacacacaggaatacttggatgtgctgggtaggcccatggtactggcaggc
aaggacgccaagcaagtgcaatggacaaacgtgtatgaagatgcgctggggctggggttg
gtggtaacagggactctccctgttttcaacctgacacaggatggccctggagaaaagaag
aaccagctaatcctgggtgtcatgggcattgatgtggccctgaatgacatcaaaaggctg
actcccaactacacacttggcgccaatggctacgtgttcgccatcgacctgaacggctat
gtgttgctacatcccaatctcaagccccaggtgagacaaactaccaacttccgggagcct
gtgaccttggacttcctggatgcagagctggaagatgagaacaaggaggagatccgccgc
agcatgattgatggtgacaaaggacacaagcagatcagaaccttggtcaaatccctggat
gagaggtacatagatgaagtgactcggaactacacctgggtgcctataaggagtaccaac
tacagcctggggctagtgctcccaccctacagcacctactacctccaagccaacctcagc
gaccagatcctgcaggtcaagttgccaatcagcaaactgaaggattttgagttcctgctc
cccagcagctttgagtctgaaggacatgttttcattgctcccagagagtattgcaaggac
ttgaatgcctcagacaacaacaccgagttcctgaaaaacttcatcgagctcatggagaaa
gtgacgccggactccaagcagtgtaataacttccttctgcataacttgattttggacacg
ggcattactcagcagttagtggagcgtgtgtggcgggaccaagatctcaacacgtacagc
ttgctggctgtatttgctgccactgatggcggcatcacgcgtgtcttcccgaacaaggca
gccgaagactggaccgaaaaccctgaacccttcaatgccagcttctaccgacgcagcctg
gataaccatggttatatcttcaagcccccacaccaggactccctgttaagaccactggag
ctggagaatgacacagtaggcgtcctcgtcagcacagctgtggagctcagtctaggtcgt
cgcacactgaggccagcagtggtgggtgtcaaactggacctagaggcttgggctgaaaag
ttcaaggtgcttgccagcaaccgcacccgtcaggaccaacctcagaagcagtgcggcccc
agcagccactgtgagatggactgcgaggttaacaacgaggacctactctgtgtcctaatt
gatgatggaggattcctggtgctgtcaaaccagaaccaccagtgggaccaggttggcaga
ttcttcagtgaggtggatgccaacctgatgctggcactgtacaataactccttctacacc
cgaaaggaatcctatgactatcaggcagcctgtgcccctcaacctcctggcaacctgggt
gctgcaccccggggtgtctttgtgcccaccattgcagatttccttaatttggcctggtgg
acctctgctgccgcctggtccttattccagcagctactctatggtctcatctatcacagc
tggttccaggcagacccggcagaagccgagggcagccccgagacgcgcgagagcagctgc
gtcatgaaacagacccagtactacttcggctcggtgaacgcgtcctataacgccatcatc
gactgcggaaactgcagcaggctgttccacgcgcagagactgaccaacaccaaccttctg
ttcgtggtggccgagaagccactgtgcagccagtgtgaggcgggccggctgctgcagaag
gagacacactcggacggcccggagcagtgtgagctggtgcagagaccgcgataccgaaga
ggtccgcacatctgttttgactacaacgcaacggaagatacctcagactgtggccgcgga
gcctccttccctccgtctctgggcgtcttggtttccctgcagctgttgctcctcctgggc
ctgccacctcggccgcagcctcaagttcactccttcgctgcctctcgccgcctctga
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