Arvicanthis niloticus (African grass rat): 117695405
Help
Entry
117695405 CDS
T08817
Symbol
Trmt2b
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X1
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anu03016
]
117695405 (Trmt2b)
Enzymes [BR:
anu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
117695405 (Trmt2b)
Transfer RNA biogenesis [BR:
anu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117695405 (Trmt2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_31
Methyltransf_25
tRNA_U5-meth_tr
MTS
Methyltransf_11
Methyltransf_4
Methyltransf_12
Methyltransf_32
PrmA
Ubie_methyltran
Cons_hypoth95
Methyltransf_23
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
117695405
NCBI-ProteinID:
XP_034342169
EnsemblRapid:
ENSANLG00005022491
LinkDB
All DBs
Position
X:complement(80681895..80737430)
Genome browser
AA seq
495 aa
AA seq
DB search
MQNPRLFLSRVGFFSKSGLLPWDSARPPDLSQCLLGRAYKGSFTSKIAKKHPSRQKYQKK
QRHCRPQDASWQERLADVVTPLWRLSYKEQLKVKFEAQKNILQSLESYLQVLHGVSSTVA
APQSEGLRCLLHPIIPSPITIGYRNKSTFSVNRSPDGNPKTVGYYLGTWKDGNVVCVPCN
HLKNIPEKHSQVAQYYEIFLRQSSVEPCLLFHEGGHWRELIVRTNRQGHTMAIVTFHPQG
LSQEELCVQKVTLKDFFTKGPGAVCELTSLYFQESTMTRCSHQQSPYQLLFGEPHIFEDL
LGLKIRISPDAFFQINTAGAEMLYRTIGELSGVNSDSILLDICCGTGVIGLSLARRASQV
HGIELVEQAVEDARWTAAFNGVTNCEFHAGRAETILPQLLKSQKDEKLTVAVVNPARAGL
HYRVVRAIRNCRAIHTLVFVSCKPHGESTRNFIELCCPPNSAKKLLGDPFVLREAVPVDL
FPHTPHCELVLLFTR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccaagattattcctttccagggtgggtttcttctccaaatcaggactgctt
ccctgggatagtgcaagaccaccagatttgtcacagtgcttattgggcagagcatataaa
gggagtttcaccagcaagatagctaagaagcacccaagcagacaaaaatatcagaagaaa
caaaggcattgtagaccacaagatgcctcatggcaggagaggctggctgatgttgtgact
ccactctggaggctgagttataaagaacaactcaaggtgaaatttgaagctcagaagaac
attttacaaagcctagagtcatacctacaagtgctgcatggagtcagtagcacggtggct
gcaccccagtctgaggggcttcgctgtctcctccaccccatcattccctcccctatcacc
attggctaccggaacaagtctaccttttctgtgaaccggagcccagatggcaatccaaag
accgtgggctactacctaggaacttggaaagatggaaatgtcgtctgtgtaccatgtaat
catctgaaaaacatcccagagaaacacagtcaagtggctcagtactacgaaatattcctt
cgacagtcttcagtggaaccctgccttctgtttcatgaaggtggacactggcgtgaactc
atagttcgaaccaataggcaaggccacacaatggctattgtcacttttcatccccaggga
ttaagtcaggaggagctctgtgttcagaaggtgaccttgaaggattttttcactaaaggc
cctggagcggtctgtgaattgacctcactctatttccaggaaagcaccatgacccgttgc
agccatcagcagtccccctaccagctcctgtttggggagccccacatctttgaagatctt
ctgggtttgaagattcgaatctctccagatgcgttcttccagattaacactgctggtgca
gagatgctgtatcggaccatcggggagctgagtggagtaaactctgacagcatcctccta
gacatttgctgtggaacaggtgtgatcggcctctctctggcacggcgggcctctcaggtt
catggcattgagctggtggagcaggcagtagaggatgccaggtggactgcagccttcaat
ggtgtcaccaactgtgagtttcatgctggcagagcagagacgattttgccacagctgtta
aagtcacagaaagatgagaagttgactgttgctgtggtgaaccctgcacgtgctggactg
cattacagagtggtgcgagccatccggaactgcagggccatccacactctagtgtttgtt
tcctgcaagccccatggtgaaagcacaaggaacttcattgaactatgctgtcctccaaac
tctgctaagaagcttctaggtgaccctttcgtcctgagagaagctgtacctgtggatttg
tttccccacaccccacactgtgagctggtcctcctcttcactcgctaa
DBGET
integrated database retrieval system
