Arvicanthis niloticus (African grass rat): 117698960
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Entry
117698960 CDS
T08817
Symbol
Sorl1
Name
(RefSeq) sortilin-related receptor
KO
K24498
sortilin-related receptor
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117698960 (Sorl1)
Membrane trafficking [BR:
anu04131
]
Endosome - Golgi transport
Others
Others
117698960 (Sorl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Sortilin-Vps10
Sortilin_C
fn3
Ldl_recept_b
Pur_ac_phosph_N
Interfer-bind
BNR_6
Motif
Other DBs
NCBI-GeneID:
117698960
NCBI-ProteinID:
XP_034346471
EnsemblRapid:
ENSANLG00005023175
LinkDB
All DBs
Position
Unknown
AA seq
2215 aa
AA seq
DB search
MATRSSRRESRLPFLFALVALLPPGALGGGWTQRLHGGRAPLPQDRGFFVVQGDRRELQL
GTHWDARGASPAAKKPLRTRRSAALQPQPIQVYGQVSLNDSHNQMVVHWAGEKSNVIVAL
ARDSLALARPKSSDVYVSYDYGKSFNKISEKLNFGVGNSTEAVISQFYHSPADNKRYIFV
DAYAQFLWITFDFCSTVHGFSIPFRAADLLLHSKASNLLLGFDRSHPNKQLWKSDDFGQT
WIMIQEHVKSFSWGIEPYDQPNTIYIERHEPFGFSTVFRSTDFFQSRENQEVILEEVRDF
QLRDKYMFATKVVHLPGSQQQSSVQLWVSFGRKPMRAAQFVTKHPINEYYIADASEDQVF
VCVSHNNNSTNLYISEAEGLKFSLSLENVLYYSPGGAGSDTLVRYFANEPFADFHRVEGL
QGVYIATLINGSMNEENMRSVITFDKGGTWEFLQAPAFTGYGEKINCELSRGCSLHLAQR
LSQLLNLQLRRMPILSKESAPGLIIATGSVGKNLASKTNVYISSSAGARWREALPGPHYY
TWGDHGGIIMAIAQGMETNELKYSTNEGETWKTFIFSEKPVFVYGLLTEPGEKSTVFTIF
GSNKETVHSWLILQVNATDALGVPCTENDYKLWSPSDERGNECLLGHKTVFKRRTPHATC
FNGEDFDRPVVVSNCSCTREDYECDFGFKMSGDLSLEVCVPDPEFSGKPYSLPVPCPVGS
SYRRTRGYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYAMRKSIYRYDLASGATE
QLPLSGLRAAVALDFDYERNCLYWSDLALDTIQRLCLNGSTGQEVIINSGLETVEALAFE
PLSQLLYWVDAGFKKIEVANPDGDFRLTIVNSSVLDRPRALVLVPQEGVMFWTDWGDLKP
GIYRSNMDGSAAYRLVSEDVKWPNGISVDSQWIYWTDAYLDCIERITFSGQQRSVILDNL
PHPYAIAVFKNEIYWDDWSQLSIFRASKYSRSQVEILASQLTGLMDMKIFYKGKNAGSNA
CVPQPCSLLCLPKANNSKSCRCPEGVTSSVLPSGDLMCDCPQGYQRKNNTCVKEENTCLR
NQYRCSNGNCINSIWWCDFDNDCGDMSDERNCPTTVCDADTQFRCQESGTCIPLSYKCDL
EDDCGDNSDESHCEMHQCRSDEFNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHTCE
ASNFQCHNGHCIPQRWACDGDADCQDGSDEDPVSCEKKCNGFHCPNGTCIPSSKHCDGLR
DCPDGSDEQHCEPFCTRFMDFVCKNRQQCLFHSMVCDGIVQCRDGSDEDAAFAGCSQDPE
FHKECDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFHCENGH
CIPNRWKCDRENDCGDWSDEKDCGDSHVFPSPTPGPSTCLPNYFRCSSGACVMGTWVCDG
YRDCADGSDEEACPSLANSTAASTPTQLGQCDRFEFECHQPKKCIPNWKRCDGHQDCQDG
RDEANCPTHSTLTCTSREFKCEDGEACIVLLERCDGFLDCSDESDEKACSDELTVYKVQN
LQWTADFSGDVTLTWMRPKKMPSASCVYNVYYRVVGESIWKTLETHSNKTSTVLKVLKPD
TTYQVKVQVHCLGKMHNTNDFVTLRTPEGLPDAPRNLQLSLNNEEEGVILGHWAPPVHTH
GLIREYIVEYSRSGSKMWASQRAASNSTEIKNLLLNALYTVRVAAVTSRGIGNWSDSKSI
TTIKGKVIQAPNIHIDSYDENSLSFTLTMDGDIKVTGYVVNLFWSFDAHKQEKRTLNFRG
GSSLSHKVSNLTAHTSYEISAWAKTDLGDSPLAFEHILTRGVSPPAPSLKAKAINQTAVE
CIWTGPKNVVYGIFYATSFLDLYRNPRSLTTSLHNKTVIVSKDEQYLFLVRVLIPYQGPS
SDYVVVKMIPDSRLPPRHLHAVQIGKTSAIIKWESPYDSPDQDLFYAIAVKDLIRKTDRS
YKVRSRNSTVEYSLGKLEPGGKYHIIVQLGNMSKDSSIKITTVSLSAPDALKIITENDHV
LLFWKSLALKEKQFNETRGYEIHMFDSVVNLTAYLGNTTDNFFKVSNLKMGHNYTFTVQA
RCLFGSQICGEPAVLLYDELSSGGDTAMVQAARSPDVAAVVVPILFLILLSLGVGFAILY
TKHRRLQSSFTAFANSHYSSRLGSAIFSSGDDLGEDDEDAPMITGFSDDVPMVIA
NT seq
6648 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacggagcagcaggagggagtcgagactccctttcctattcgccctggtcgcg
ctgctgccccccggggctctcggcgggggctggacgcagagattgcacggtggccgagca
cccttgccccaggaccggggcttcttcgtggtgcagggcgaccggcgcgagctgcagctg
ggaacacactgggatgcccgcggggcgagcccggcggccaagaagccactcaggacgcgg
cggagcgccgctctgcagccccagcctatccaggtgtatggacaggtcagtctgaatgac
tcccacaatcagatggtggtgcactgggccggagagaaaagcaacgtgatcgtggcatta
gcccgggacagcctggcattggcaaggcccaagagcagtgatgtgtatgtgtcttatgac
tatggaaaatcattcaataagatttcagagaagctgaacttcggcgtgggaaacagcacc
gaagctgtgatctcccaattctaccacagccctgcagacaataagaggtacatctttgta
gatgcttatgcccaattcctctggatcacatttgacttctgcagcactgttcatggcttc
tccattcccttccgggcagctgatctcctcctccacagcaaggcctccaacctcctcttg
ggttttgacaggtctcaccccaacaagcagctatggaagtcagatgattttggccagacc
tggatcatgattcaggaacacgtgaagtccttctcttggggaattgaaccctatgaccag
ccaaacactatctacatcgagcggcatgagcccttcgggttctccacagtgttccgcagc
acagatttcttccagtcccgggaaaaccaggaagtgatcctggaggaagtgagagacttt
cagcttcgggacaagtacatgtttgctacaaaggtggtgcatcttccgggcagccagcag
cagtcatctgtccagctctgggtctcctttggccggaagcctatgagagcagcccagttt
gtcacaaagcatcctattaatgaatattacatcgctgatgcctccgaggaccaggtgttc
gtgtgtgtgagccataacaacaacagtactaacctatacatctcagaggcggaggggctg
aagttctccctctccttggagaatgtgctgtattatagcccaggaggggctggcagtgac
accctggtgaggtattttgcaaatgagccgtttgcggactttcaccgagtggaaggctta
caaggagtctacattgccactctgattaatggttctatgaatgaggagaacatgaggtcg
gtcatcacctttgacaaagggggaacctgggaatttcttcaggccccggccttcacagga
tatggagagaaaatcaattgtgagctttctcggggttgttccctccacctggcccagcgc
ctcagtcaactgctcaaccttcaacttcggagaatgcctatcctgtccaaggagtcagcc
cctggcctcatcattgctaccggctccgtgggaaagaacttggccagcaagaccaacgtg
tatatctccagcagtgccggagccaggtggagagaggctcttcctggacctcattactat
acttggggtgaccatggaggcatcattatggctattgcccagggcatggagactaacgag
ctgaagtacagcaccaatgagggggagacctggaagacgttcatcttctctgagaagcct
gtgtttgtgtacgggctcctcacagaacccggtgagaagagtaccgtcttcaccatcttt
ggctctaataaggagactgtccacagctggctcatccttcaggtcaatgccactgatgcc
ttgggggttccttgcacagaaaacgactacaagctgtggtccccatctgatgagcgggga
aacgagtgtttgctaggacacaagacagttttcaaaaggaggacccctcacgcaacgtgc
tttaatggggaggactttgaccgcccggtggtcgtgtccaactgctcctgcactcgggag
gactatgaatgtgactttggcttcaagatgagcggagatctctccttagaggtttgtgtt
ccagaccctgagttttctgggaagccctacagccttcctgtgccttgccctgtggggtct
tcatacaggagaacaagaggctatcggaagatttctggggacacttgcagcggaggagat
gttgaagcccggctggaaggggagctggtcccctgtcccctggcagaggagaatgagttc
atcctgtacgccatgcggaagtccatctaccgctacgacttggcctcgggagccacagag
caacttcctctctcggggctgcgggccgctgtggccctggactttgactatgaacgcaac
tgcctgtattggtctgacctggccctggacaccatccagcgtctctgcttgaacgggagc
acaggacaggaagtgatcatcaattccggcctggagaccgtggaggccttggccttcgaa
cccctcagccaattactctactgggtggatgctggctttaaaaagattgaggtcgctaat
ccagatggtgacttccgactgacaatcgtcaattcctctgtgcttgatcgacccagggct
ctagtccttgtacctcaagagggggtgatgttctggaccgactggggagacttgaagcct
ggcatttaccggagcaacatggatggctctgctgcctatcgcctcgtgtcagaggacgtg
aagtggcccaacggcatctctgtggacagccagtggatctactggacagatgcttacctg
gactgtatcgagcgtatcaccttcagcggccagcagcgttcagtcatccttgacaacctc
ccacacccgtacgccattgctgtctttaagaatgaaatctactgggatgactggtcgcag
ctcagtatcttcagagcttcgaagtacagcagatcccaggtggagattctggcaagccag
ctcacgggcctgatggacatgaagattttctacaagggaaagaatgctggaagcaatgcc
tgcgttcctcagccctgcagtctactgtgcctccctaaagccaacaacagcaaaagctgc
aggtgtccagaaggtgtgaccagcagtgtcctcccctctggggacctgatgtgtgactgc
ccccagggctatcagaggaagaacaacacctgcgtcaaagaagagaacacctgtcttcgc
aaccagtatcgctgcagcaacggcaactgtattaacagcatttggtggtgtgatttcgac
aacgactgtggagacatgagtgacgagagaaattgccccacgacagtctgtgatgcagac
actcagttccggtgccaggagtcagggacgtgcattccgctgtcctataagtgtgacctt
gaagatgactgtggagataacagtgatgagagtcactgtgagatgcaccagtgtcgcagc
gatgagttcaactgcagctctgggatgtgcatccggtcctcgtgggtgtgtgatggagac
aacgactgtagggactggtctgatgaagccaactgtaccgccatctaccacacctgtgag
gcctccaacttccagtgccacaatggccactgcatcccccagcgatgggcatgtgacggt
gacgcggattgccaggatggctctgatgaagatcctgtcagctgtgagaaaaagtgcaac
ggattccactgcccaaacggcacctgcatcccctccagcaagcattgtgacgggctgcgg
gactgccccgacggctccgatgaacagcattgcgagcccttctgcacgcgcttcatggac
ttcgtgtgtaagaaccgtcagcagtgtctgttccattccatggtgtgtgacgggatcgtc
cagtgccgagatggctctgacgaagatgccgccttcgccgggtgctctcaagaccccgaa
ttccacaaggagtgtgacgagtttggcttccagtgtcagaacggagtgtgcatcagcctg
atttggaagtgcgatgggatggatgactgtggggactactctgacgaagccaactgtgaa
aaccccacggaagccccaaactgctctcgctactttcagttccactgtgagaatggccac
tgcatccccaacaggtggaaatgcgacagagagaatgactgtggggactggtccgatgag
aaggattgcggagattcacacgtttttccctcccccacccccgggccctccacatgtctg
cccaattacttccgctgcagcagcggggcctgtgtgatgggcacctgggtgtgcgacggc
tacagggactgtgctgatggctcggatgaggaagcctgcccttctctagcaaactccact
gccgcctccactcccacccagctcgggcagtgtgaccgatttgagttcgagtgccaccaa
ccaaagaaatgtatccccaactggaagcgctgcgacggccaccaagattgccaagacggc
cgggatgaagccaactgccccactcacagcaccttgacctgtacgagcagggagttcaag
tgtgaggatggcgaggcgtgcatcgtgctcttggagcgttgcgatggcttcctggattgc
tccgatgagagcgatgagaaggcctgcagcgatgagttaactgtatataaagtccagaat
cttcagtggacagctgatttctctggggatgtgactctgacctggatgcggcccaaaaaa
atgccatccgcttcttgtgtatacaacgtctactacagggtggttggagagagcatatgg
aagaccctggaaacccacagcaataaaacaagcactgtgctaaaagtcctgaagccagac
accacgtaccaggttaaggtccaggtgcactgcctcggcaagatgcacaacaccaatgac
tttgtgaccctcaggaccccagaaggcttgccagatgcccctcggaatctccagctctcc
ctgaacaatgaagaagaaggtgtgattcttgggcactgggctcctcccgttcacacccat
ggcctcattcgagagtacattgtggaatacagcaggagtggatccaagatgtgggcctcc
cagagagctgccagcaactctacggaaataaagaatttactgcttaacgccctctacacc
gtcagagtggctgcggtgacgagtcgcgggataggaaactggagcgactctaaatctatc
accaccataaaaggaaaagtgatccaagctccaaatatccacattgacagctatgatgaa
aactctctgagctttaccctgaccatggatggtgacatcaaggtcactggctatgttgtg
aaccttttctggtcatttgatgcccacaaacaagagaagagaaccttgaacttccgagga
ggaagttcactgtcacacaaagttagcaatctgacagctcatacgtcttacgaaatttct
gcctgggccaagacagacttgggggatagtcctctggccttcgagcacatcttgaccaga
ggcgtcagtccacctgctcctagtctcaaagccaaggccatcaatcagactgcagtggag
tgcatctggactggccccaagaatgtggtgtatggtattttctatgccacgtccttcctt
gacctctaccgaaaccctaggagcctaaccacgtcgctccacaataagacagtcatcgtc
agcaaggatgagcagtatttgtttctggtccgggtgttgatcccttaccaagggccgtct
tctgactacgttgtagtgaagatgatcccagacagcaggcttccacctcggcacctgcat
gcagttcaaatagggaaaacctcagcaatcatcaagtgggaatcaccctatgactctcct
gaccaggacttgttctacgccattgcagtgaaagatctgatcagaaagacggacaggagc
tacaaggtcagatcccgcaacagtactgtggagtacagccttggcaagctggaacctgga
gggaaataccatatcattgttcagctgggaaacatgagcaaggattccagcataaaaatc
accacagtttcgttatcagcacccgatgccttaaaaatcataacagaaaacgaccacgtt
ctcctcttttggaaaagcctagctttaaaggaaaagcaattcaatgaaaccaggggctac
gagatacacatgttcgacagtgttgtgaatctcaccgcttacctcgggaatactactgac
aacttctttaaagtgtccaacctgaagatgggtcataattacacttttacggtccaagca
cgctgtctctttggtagccagatctgtggggagcctgccgtgctgctgtatgatgaactg
agctcagggggagatacagcaatggtccaggctgccaggtctcctgacgttgcagctgtg
gtggttcctatcctgttcctcatcttactgagcctgggtgtcggcttcgccatcctctac
acaaagcaccgccgcttacagagcagttttacagcctttgccaatagccactacagctcc
aggctgggctcggccatcttctcctctggggatgacctaggagaggatgatgaagatgct
cccatgattactggattctcagacgatgtccccatggtgatagcgtga
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integrated database retrieval system
