Arvicanthis niloticus (African grass rat): 117705283
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Entry
117705283 CDS
T08817
Symbol
Chpf
Name
(RefSeq) chondroitin sulfate synthase 2 isoform X1
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
anu01100
Metabolic pathways
Module
anu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117705283 (Chpf)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
anu01003
]
117705283 (Chpf)
Enzymes [BR:
anu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117705283 (Chpf)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
117705283 (Chpf)
Glycosyltransferases [BR:
anu01003
]
Glycan extension
O-Glycan
117705283 (Chpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
117705283
NCBI-ProteinID:
XP_034353631
EnsemblRapid:
ENSANLG00005007988
LinkDB
All DBs
Position
3:108394441..108399325
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AA seq
776 aa
AA seq
DB search
MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAAR
RPNSVQPGAERERPGAGAGAGAGESWEPRVLPYHPAQPGQATKKAVRTRYISTELGIRQK
LLVAVLTSQATLPTLGVAVNRTLGHRLEHVVFLTGARGRRTPSGMAVVALGEERPIGHLH
LALRHLLEQHGDDFDWFFLVPDATYTEAHGLDRLAGHLSLASATHLYLGRPQDFIGGETT
PGRYCHGGFGVLLSRTLLQQLRPHLESCRNDIVSARPDEWLGRCILDATGIGCTGDHEGM
HYNYLELSPGEPVQEGDPRFRSALTAYPVRDPVHMYQLHKAFARAELDRTYQEIQELQWE
IQNTSRLAADGERASTWPVGIPAPSRPASRFEVLRWDYFTEQYAFSCADGSPRCPLRGAD
QADVADVLGTALEELNRRYQPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGR
WPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAERDLASGFLEAFATAALEPGD
AAALTLLLLYEPRQAQRAAHADIFAPVKAHVAELERRFPGARVPWLSVQTAAPSPLRLMD
LLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGP
PELGRDTGHFDRQAASEACFYNSDYVAARGRLAAASEQEEELLESLDVYELFLRFSSLHV
LRAVEPALLQRYRAQPCSARLSEDLYHRCRQSVLEGLGSRTQLAMLLFEQEQGNST
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgtcgttgctgctgtccgtgctgcggcccgcggggcccgtggccgtgggcatc
tctctaggcttcaccctgagcctgctcagcgtcacctgggtggaggagccttgcggaccc
gggccgccccaacccggagattctgagctgccgccgcgcggcaacaccaacgcggcgcgc
cggcccaactcggtgcagcccggagcggagcgcgagaggcccggggccggggccggcgca
ggcgccggtgagagctgggagcctcgtgtcttgccctaccatcccgcacagccaggccag
gccaccaagaaggccgtcagaactcggtatatcagcacggagctgggcatcaggcagaag
ctgctggtggcagtgctgacctcacaggccacgttgcctacactgggtgtggctgtaaac
cgaactctgggacaccgattggagcatgtagtgttcctgaccggtgcgaggggccgccgg
acaccatcaggcatggcggtggtggcactgggtgaagagcggcccatcggacacctgcac
ctggcgctgcgccacctgctggagcaacacggcgatgactttgactggtttttcctagtg
cctgatgccacctacactgaggcgcatggactggaccgcctagctggccacctcagcctt
gcttcggcaacccatctatatcttggccggccgcaggacttcatcggtggagagactacc
ccaggccgctactgccacggaggctttggagtgttgctgtctcgcacactgctacagcaa
ctgcgcccccacctggaaagctgccgcaatgacatcgtcagtgctcgcccggatgagtgg
ttgggccggtgcatcctagatgccacaggcattggctgtactggtgaccatgagggaatg
cactacaactatctggaactgagccccggggaacctgtgcaggagggagaccctcgtttc
cgcagcgccttgacagcctaccctgtgcgtgaccctgtgcacatgtaccagctgcacaaa
gctttcgcccgagctgagctggaccgcacataccaggaaattcaagaattgcagtgggag
atccagaataccagcagactggctgctgatggggagagagcctctacctggccagtgggc
attccagcaccgtctcgccctgcctcacgctttgaggttctgcgctgggactacttcacg
gaacagtatgctttctcctgtgctgatggctcgcctcgctgcccactgcgtggggccgac
caggctgatgtggcagatgtcctggggacagccttagaggagctcaaccgccgttaccag
ccagcgctacggctccagaagcaacagctggtgaatggctaccggcgttttgatccagcc
cgaggcatggagtacacactagacttgcagctggaagcgctgacgccccagggtggccgc
tggcccctcacacgcagggtgcagctccttcggcccttgagccgagtggagatcttgccc
gtgccctatgtcactgaggcgtctcggctcactgtgttgctgcctctggctgcagcagag
cgcgacctggcgtctggcttcctggaagcctttgccaccgcagcactggaacctggtgat
gcagcagccttgaccctgctgctactgtatgagccccgccaggcccagcgggcagcccat
gcagacatcttcgcaccagtcaaagcccatgtggcagagctagaacggcgtttccctggt
gcccgggtgccctggctcagtgtgcagacagccgcgccctctccactgcgtctcatggat
ctgctctccaagaagcatccactagacactctgttcctgctggccgggccagacacagta
ctcacacctgacttcctgaaccgctgccgcatgcatgccatctctggctggcaggccttc
tttcccatgcacttccaggccttccaccctgctgtggctccaccccagggccctgggcca
ccagaactgggccgtgacactggccactttgatcgtcaggctgccagtgaggcctgcttc
tacaactccgactatgtggcggctcgtggacgactggcggcagcctccgagcaggaggag
gagctgctggagagcctggatgtgtatgagctgtttctgcgcttttccagcttgcacgtg
ctgagggccgtggaaccagccttgctgcaacgctaccgggcccagccgtgtagcgcacga
ctcagtgaggacctttaccaccgctgccgccagagtgtacttgagggccttggctcccgc
acccagcttgccatgctgctctttgagcaggaacagggtaacagcacctaa
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