Arvicanthis niloticus (African grass rat): 117709340
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Entry
117709340 CDS
T08817
Symbol
Frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117709340 (Frem1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
117709340
NCBI-ProteinID:
XP_034359543
EnsemblRapid:
ENSANLG00005015761
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All DBs
Position
5:66756248..66873063
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AA seq
2220 aa
AA seq
DB search
MHSPGCTGPKALLFLLLQLFLLHLASATFISINQGLRVMKGRSAFLSGDHLRFSIPKEKD
ACRVEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYVHNGCPILDEDSVKLRLYRFTETDT
FMETFLLRIYLVEPDCNIIRLSSNVLEVTEFYGLSQAIDKNLLQFDYDRSASLDCTIRLD
PVRTQLPAHGKLVVVNRKSEGPRGDQPQSFFSETQLGAGLKCLDGSCALGSKQVASLKVS
CEEFLMMGFHYQHMQPPSPNIDYIPIQLDLTDRRSKTVYKSESTWLPVYIRVGIPNQAPR
AAFMAMFVLEVDQFILTPLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLLDHTRPIS
SFTWKDLSDMQVAYQPPNSSHPERRHYTMELEVYDFFFERSAPITVHISIRTADTNAPRV
SWNTGLNLLEGQSRAITWEQFQVVDNDDIGAVQLVTIGGLQHGQLTVREGKGFLFTVADL
QAGVVRYHHDDSDTTKDFVAFRIFDGQHSSHHKFPINILPKDDSPPFLITNVVIELEEGK
TILIQGSMLRASDMDSSDDHIFFNITKYPQAGEIMKKPGPRFIGYPVPGFLQRDLFNGII
YYRHFGGEIFEDSFEFVLWDSHEPPNLSVPQVATIHITPVDDQLPKEAPGISRHLVVKET
EVAYITKKHLHFLDMESHDGGLIYTVTRPPCFSFSHRHLDAGKLFMVDSVPKLTKNPTAP
GLSSFTQVRKFVKILANTICTHVPYQLTLLGGLDLGGYKILISANQHTYPSQFASQHAVN
HMKVAYMPPMQDIGPTRRHVQFTLSVSNEHGGTLHGICFNITILPVDNQVPKVFTNTLRV
AEGSQCTISTEHILVSDVDTPLDNICLSLQEMPLHGVVELDGFPLKPRGTFFWRDLHTLK
VRYQHDGSEVLQDEIYLEVTDGTNSAEFVLHVEVSPVNDEPPVLKADLIPMMHCSEGGEV
TITPEYIFATDADNDDLELLFLIVREPQHGVVRKAGLHVGRFSQGDVISGAVTYKHTGGE
IGLEPCFDNVVLVVSDGEADPLVNGCCYDGPDSSVPLHKSFPMYQLNITVHPVDNQPPSI
IIGRMFTVDEGFSAALTTHHLTATDRDTAMDDLEFILVSHPQFGYLENTLPSAGYEKSNM
GISIASFQWRDMKASHINYVQSRHLRVEPTADQFMVYATDGKQRSLETTFHVIINPTNDE
APDLVVQNITVYEGHMIELDSSIISAADRDVPEDPLLFSIAHKPQHGLLVNAAVSKDSHQ
IKQLVQEIHNFSTDLLRNGMKLAYAHDDSESSADNFVIQLSDGKHKILKTITVNIIPVND
ETPVLSKKAEISMTVGDTRVLSSAVLSAIDKDSPREKIHYLFERLPQNGQLQLKIGRDWV
PLSTGMQCTQEDVDLNLLRYIHAGKMDSQDGDSFTFYLWDEDNRSPAFDCHIIIEDVGKG
DIVIHAKPLVVAKGDRGLLTTATLLAVDGADRPEELLYLITSPPQYGQVEYVHYPGVPIT
SFSQMDIAGQTVCYIHKSRTAVPSDSFRFTISNGLQTQHGVFEITLQTVDSALPVMTKNK
RLRLAEGTVGLLSADHLQLTDPDTPPENLTFFLAQLPRHGYLYLRGKVLQHNFTQRDVDS
RDVTYQHSGGGAQEDCFTFLATDGKNQGFVVDGKVQKEPIRFTIQVEQLDKAAPQITHLH
SPSQVGLLKNGCYGIYITSHVLKALDPDTEDDQIIFKILRGPLHGRLENTTTGEFIHEQF
TQKDLSSKTVLYIINPALQVNSDILEFQAMDPAGNTATPQSLELKWSYIEWTQTEYEVCE
NVGLLPLKVTRRGYSMDSAFVGIEVNQVSAIVGKDFTVTPSKLLQFDPGMSTKMWNIAIT
YDGLEEDDEVFEVILNSPVNAVLGTRTKAAVKILDSKGGRCHPSNSFNQSKQSTWGKGRW
HPLPSGSSSLTTSGSPHLERRPSPSFTRGDALQGFDLTDLSQRKLMTQGNGKSVLPSSVC
RNGTDTIYNYHGIVSLKLEGDRFSAHKRKAKISLVSQPQRTIKVAEVPRADEVASTTVSH
FLRQGMQPLFPKNCSVELKGLFHFEESTHRLYQCDGISWKAWSPQTKGLEDRSCPAGWLL
HSGYCHILITRQKGTWTTATRACREQHQSNLVTVFSRRHMQWLWAISGRKPFWIGLKNQV
RTGFWEWIGGEPVAFTNWRRGPPQHPKHGKNCVLVQKRGQWQSKNCSKGKAHNFVCSRKL
NT seq
6663 nt
NT seq
+upstream
nt +downstream
nt
atgcactctccaggctgcactgggcccaaggctctgctgttcttgctgctccagctgttt
ctgctgcatctggccagcgccaccttcatcagcatcaaccagggcctgagagtgatgaag
ggtagatctgccttcctgtctggagatcacctgaggttttccatccctaaagagaaggat
gcctgcagagtggaggtggtgatgaatgagcccataacccagagggtcgggaaactcact
ccacaggtctttgattgccattttcttcccaatgaagtaaagtatgttcacaatggatgc
ccaattctggacgaagactctgtgaagcttagactttacaggtttactgaaacagacacc
ttcatggaaacctttctcttgcggatctatcttgtggaaccagactgtaacatcatccgt
ctgagcagcaatgtgctggaagtgactgaattctatggcttatcccaagccattgataag
aacctgctccaatttgattacgataggtcagctagcttagattgcaccatcagactagac
ccagtgaggactcagctgccagcccatggcaagctggttgtggtgaatcgtaagtcagag
ggacctcgtggagatcagccacaaagctttttctctgagacacagctaggggcaggattg
aagtgtctggatggaagctgtgccctaggatcgaagcaagtggcaagtctgaaagtgagc
tgtgaggagttcctgatgatggggtttcactaccaacacatgcagcccccttcccccaac
attgactacatccccattcagttggatctcacggacagaaggagtaaaaccgtatacaag
tcagagagcacgtggttgcctgtctatatcagagttggcattcctaaccaggccccaagg
gctgcgttcatggccatgtttgttctggaggtggaccagttcatactgacccctctgaca
acctccgttctggactgtgaggaggatgagactccgaaacccttgttggtgtttaacatc
actaaagccccactccagggctacgtgacccacctgctggatcataccagacccatctct
tcattcacctggaaggatctcagtgacatgcaagttgcctaccagccaccaaacagcagc
caccctgagaggagacattacacgatggagctggaggtgtacgacttcttttttgagagg
agcgcccccatcactgtccacatctccatcagaacagctgacacaaatgcccctcgggtg
tcctggaatacaggtttgaatctcctggaggggcagtctcgggccatcacttgggaacag
tttcaggtcgttgacaatgatgacattggtgctgtgcagttggtcaccattggtggactg
caacatggacagcttacagtaagagaggggaaaggatttctcttcactgtggctgatctt
caggctggagttgttcgctatcatcatgatgacagtgacaccactaaagactttgtggct
ttcaggatattcgatggccaacacagcagccatcacaagtttcctatcaacatcttgcct
aaagatgacagccctccattcctcataaccaatgttgtgattgaactagaagaagggaag
accatcttgatccaagggtccatgctgagagcttcagacatggactccagcgatgaccac
atcttctttaatatcacaaagtacccccaggctggggagattatgaagaagccagggcca
agatttatagggtatcctgttcctggcttccttcagagagacctgttcaatggaatcatt
tactatcgtcacttcggcggagaaatctttgaagattcttttgaatttgttctgtgggac
agccacgagcctccaaacctctcagtgccacaggtggcgacgatccatatcactccagta
gatgaccaacttcccaaggaagctcctggtatttcccggcatttggttgtcaaggaaacc
gaagtggcctacatcactaaaaagcacctacatttcctagacatggaatctcatgatggg
gggctcatctacacagtgacacgccctccatgtttctccttcagccacagacacttggat
gctgggaagttatttatggtggacagcgtaccaaaactaaccaaaaatcctacagcccca
gggctgagctcatttactcaggtacgaaaatttgtaaaaatactggctaacacaatatgt
actcatgttccatatcaattaacattgctgggaggcttggacttgggtggctacaagatt
ctgatctctgcaaatcagcatacatatccatctcaatttgcttcacagcatgccgtgaac
catatgaaagtggcctacatgccacccatgcaagatataggccccacacgtcgacatgtg
cagttcacactgtctgtcagtaacgagcatggaggtactttgcatggaatctgcttcaac
atcacaattctcccagtggacaatcaggttcccaaggtattcaccaacaccctgagagtg
gccgagggcagtcagtgcaccatcagcacggagcacattttggtttctgatgtggacacc
cccttggacaacatctgcctctctcttcaggagatgcctctgcatggcgtggtagagctg
gatggatttcctctaaagccaagaggcacatttttttggcgagacctccataccttaaaa
gttaggtatcaacatgatggatctgaggttcttcaggatgagatatacttggaggtcaca
gatggcacaaactcagcagaatttgttctccacgttgaggtatcccctgtgaatgatgag
ccacctgttctgaaggctgacctcattcccatgatgcactgctcagagggtggagaggtg
accatcacccctgaatacatttttgctactgatgcagacaatgatgacttggaacttctg
tttctgattgtccgagagcctcagcatggagtggtgagaaaagctggactccatgtgggc
aggttctctcagggagatgtcatctcaggggctgtgacatataaacacacaggtggcgag
attggcctcgaaccttgttttgacaatgttgtattggtggtttcggatggcgaagctgac
cctttggtgaatggctgttgctacgatggacctgattcgtctgttcctcttcataaatcc
tttcccatgtaccagctcaacatcacagtgcatccagtcgacaaccagccaccttcaatt
ataataggtaggatgttcacagtggatgaaggcttctcagcagcccttactactcatcac
ttgactgccactgaccgggacactgccatggatgacttagaattcattttggtttctcat
ccccagttcggctacctagaaaacacactgccttctgcaggctatgagaaaagtaatatg
ggcataagcatagcttcattccagtggagagacatgaaggcttctcacattaactatgtg
cagtccaggcacctgagggtggaaccaactgctgaccagttcatggtatatgccacagat
gggaagcaacgctccttggagacaacatttcatgttatcatcaaccccacaaatgatgaa
gctcctgaccttgtggtacagaatatcactgtgtatgagggtcacatgatagaactggat
tcttctatcatcagtgctgctgacagggatgtccctgaggaccccttgctcttcagcatc
gctcacaagccccagcatggcctcctcgtcaatgcggctgtcagcaaggactctcatcaa
atcaagcagctggtacaggaaattcacaacttctccacggaccttctcaggaatggaatg
aagctggcctatgcccacgatgactcggagagctctgctgataacttcgtgatccagttg
tcagatgggaaacataaaatccttaaaaccatcacagtaaacatcatcccagtgaatgat
gagacaccagtgctaagcaagaaggccgaaatctcaatgactgtgggtgatactcgagtt
ctgtctagtgctgttctttcagccatagataaagactcacccagggagaagattcactat
ttattcgaaagacttccccaaaatggacaacttcaacttaagatagggagggactgggtc
cctctctccactggcatgcagtgcacccaggaggacgtggatctgaacttgctaagatac
attcatgctggtaaaatggattcccaggatggagacagcttcaccttctacctgtgggat
gaggacaacaggtcaccggcatttgactgtcacatcatcattgaagatgtgggaaaaggt
gatattgtcatccacgcgaaaccactcgtggtagccaaaggtgacagaggtctcttgaca
acggccactcttctggctgtggacggagcagacaggcctgaggaattgctctacctcatc
acttccccaccacagtacggccaagtggagtacgtccactatcctggagtccccattacc
agctttagccaaatggacatagcaggacagacagtctgctacatacacaagagcaggaca
gccgtccccagtgacagcttcagatttaccatcagcaatggactgcagacccagcatggg
gtgtttgagatcacactgcagactgtggacagtgccttgcctgtgatgaccaagaacaaa
aggctgaggttagctgaagggactgtgggcctactgtctgccgatcaccttcagctgacc
gaccccgacacacctccagagaacctaactttctttctggcccagcttccacgacatggg
tacctctacctgagagggaaagtacttcaacacaatttcacccagcgagatgtggacagc
agggatgtaacctaccagcactcaggaggtggtgcacaggaggactgctttactttccta
gctacagatgggaagaaccaaggctttgtcgtggatgggaaagttcagaaagagcctatt
cgtttcactatccaggtggagcagctggacaaggcagcgccccagatcacacacttgcac
tccccttctcaagtggggctcttgaaaaacggctgctatgggatttacatcacttcccat
gtgctgaaggcattggaccctgacacagaggatgaccagatcatctttaagattttacga
ggcccattgcatggacgtctggagaacacaacaacaggtgaattcatccatgagcaattt
acccagaaggacttaagcagtaagactgtcctttacatcataaaccctgctttgcaagtg
aattcagatatcctggaatttcaggccatggaccccgcagggaacactgccactccccag
agcttggagctaaaatggtcttatattgaatggacccagactgaatatgaggtttgtgag
aatgtgggcttattgcccttgaaagttaccagaaggggctattccatggactcagccttt
gtgggtatagaggttaaccaagtgtcagctatagttggaaaagattttactgtcactcca
tccaaactgcttcaatttgacccaggaatgtcaactaagatgtggaatatagcaattacc
tatgacggattagaggaagatgatgaggtctttgaagtaattctgaactcccctgtgaat
gcggttcttggcacacggacaaaagcagcagtgaaaattttggactcaaaaggaggacgg
tgccatccttcaaattccttcaaccaaagcaagcagagcacatgggggaagggccgttgg
catccgttgccctcggggtcatcctcactcaccacttcaggttctcctcatctggaaaga
aggccttctccatctttcaccagaggagatgctcttcagggttttgatctcacagacctc
tctcaaaggaaattgatgacccaggggaatggcaaatcagttcttccatcctctgtttgc
agaaatggaacagacaccatctacaattatcatggtatagtttccttgaaactagagggt
gacagattctcagctcacaaacggaaggccaaaatatccctcgttagtcagccacagagg
acaatcaaagtggcagaggtgcctcgagctgatgaggtggcatccacaactgtctcacac
tttctcagacagggtatgcagcccttgtttccaaagaactgttctgtggaattaaaggga
ctctttcattttgaagaaagcacccacagattgtatcaatgtgatggaatctcctggaaa
gcctggagcccccaaaccaaggggctggaggacagatcctgcccagctggatggcttctt
cattctggctactgtcacatcttgatcacaagacagaaaggcacctggaccacagctacg
agagcttgcagagaacagcaccagagcaaccttgtgactgtattctccaggaggcatatg
cagtggctatgggctatcagtggaagaaagcccttctggataggcttgaagaaccaagtg
cgaactggcttctgggaatggatcggaggtgaacctgttgctttcaccaactggaggaga
gggccccctcagcacccgaaacatggaaagaactgcgttttggttcagaaaagaggacaa
tggcagtcaaagaactgtagcaaaggcaaggctcacaattttgtgtgctcaaggaagctc
tga
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