KEGG   Arvicanthis niloticus (African grass rat): 117709420
Entry
117709420         CDS       T08817                                 
Symbol
Taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117709420 (Taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:anu03021]
    117709420 (Taf12)
   03036 Chromosome and associated proteins [BR:anu03036]
    117709420 (Taf12)
Transcription machinery [BR:anu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117709420 (Taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     117709420 (Taf12)
Chromosome and associated proteins [BR:anu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     117709420 (Taf12)
    STAGA complex
     117709420 (Taf12)
    TFTC complex
     117709420 (Taf12)
    SAGA complex
     117709420 (Taf12)
    SLIK complex
     117709420 (Taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF4 DUF5827
Other DBs
NCBI-GeneID: 117709420
NCBI-ProteinID: XP_034359681
EnsemblRapid: ENSANLG00005001851
LinkDB
Position
5:complement(22458659..22476600)
AA seq 161 aa
MNQFGPSALINLSSFSSIKPEPASTPPQGSMANSTTVGKIPGTPGTGGRLSPENNQVLTK
KKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHL
ERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 486 nt   +upstreamnt  +downstreamnt
atgaaccagtttggcccctcagcgctaatcaacctctccagtttctcatccattaaacca
gagccagccagcaccccgccgcaaggctccatggccaatagcaccacagtgggaaagata
ccaggcactcctgggacaggcggtcgtcttagccctgagaacaaccaggtattgaccaag
aagaaattacaagacctagtaagagaagtggaccctaatgagcagctagatgaagatgtg
gaagagatgctgctacagatcgctgatgattttattgagagtgtggtgacagctgcctgc
cagcttgctcggcaccgcaagtccagcaccctcgaggtgaaagatgtccagctgcatcta
gagcgccagtggaacatgtggatcccaggatttggctctgaggaaatcagaccctacaaa
aaagcttgtaccacagaagctcacaaacagagaatggcactgatccggaaaacaaccaag
aaataa

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