Arvicanthis niloticus (African grass rat): 117709891
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Entry
117709891 CDS
T08817
Symbol
Dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117709891 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117709891 (Dhx58)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117709891 (Dhx58)
Pattern recognition receptors [BR:
anu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
117709891 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
Terminase_6N
AAA_19
AAA_22
zinc_ribbon_4
CATASP
Motif
Other DBs
NCBI-GeneID:
117709891
NCBI-ProteinID:
XP_034360197
EnsemblRapid:
ENSANLG00005008280
LinkDB
All DBs
Position
6:21704199..21715273
Genome browser
AA seq
678 aa
AA seq
DB search
MELRPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGKVVVLVNRVHLV
SQHAEEFRRMLDKHWTITTLSGDMGSRAGFGLMARSHDLLICTAELLHLALNSSEEDERV
ELTEFSLIVVDECHHTHKDTVYNTILSRYLEHKLKKAKPLPQVLGLTASPGTGGATKLQG
AIDHILQLCANLDTWRIMSPKNCCSQLLEQNPKPCKQYDLCQRRAKDPFGDLLKKLMNQI
HQQLEMPDLKQQFGTQMYEQQVVQLCKNAAEAGLQEQRVYALHLRRYNDALFIHDTVRAW
DALDMLQDFYDRERATKTQMVHAERWLLELFDDHKSVLARLAVQGPENPKLEMLEGILLK
QFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQTVGIKPQMLIGAGNTGQSTHMTQKDQ
QEVIQEFRDGILNLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARGRARAGQSVYS
FLATEGSREVKRELTNEALEALMEQAVAAIQNMDPDEFKTKIQDLQLAALVKRAARAAHR
ESQQRQFSPERVQLLCINCMVAVGYGSDLRKVEGTHHVNVNPNFSVYYTTSQEPVAINKV
FKHWTPGGIVRCSNCGEVWGFQMIYKSVTLPVLKIRSMLLETPHGKIQAKKWSRVPFSIP
DYDILQDCTQSLSDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaagtgatcttacctgctctggagggcaagaatatc
attatatggctgcccactggtgctgggaagacccgggcagctgcctttgtggccaagcgg
catctagagacagtagacagagggaaggtggtggtactggtcaacagggtacacctagtg
agccagcatgctgaggagttcaggcgcatgttggataaacactggaccataacaaccctg
agtggggacatgggatcacgagctggctttggcctaatggctcggagccatgacctgctc
atctgtacagcagagttgttgcacctggcactgaacagctctgaggaggatgagcgtgta
gagctcacagaattctcgctgattgtggtggacgagtgtcaccacacccacaaggacacc
gtctacaataccatcttgagccggtacctagaacataagctgaagaaggcaaagcccctt
ccccaggtcctgggtctcacagcctccccaggcactggaggggccaccaagctccaagga
gccattgaccacattctacagctctgtgcaaatttggatacctggcgcatcatgtcacca
aagaattgctgctcccagctgctggagcaaaacccaaaaccctgcaagcagtatgacctc
tgccaaaggcgcgcaaaggatccttttggagacttgcttaaaaagcttatgaaccaaatc
caccaacaactagagatgcctgacctgaagcagcaatttggaacccagatgtatgagcag
caagtggtacagttgtgcaagaatgcggcagaggctggcctccaggaacagcgggtgtat
gcgctgcatttgcggcgctacaatgatgcgctatttatccacgatactgtccgtgcgtgg
gatgctcttgacatgttgcaagatttctacgacagagaacgtgccaccaaaacacagatg
gtgcatgctgaacgctggctgctggagctgtttgatgaccataaaagtgtgctggcccgg
ctagcagttcagggtcctgagaatccaaagttggagatgctggaaggaatcctactgaag
cagtttggaagtcctggccacactcgggggatcatcttcaccagaacccgtcagacggct
tcctccctcctgctctggcttcggcaacagccttgcctacagactgtgggcatcaagcct
cagatgctgattggagcagggaacacaggccagagcacacacatgacccagaaagaccag
caagaagtgatccaggagttcagggatggtatcctgaaccttctagtggccacaagtgtc
gcagaggagggcctggatattgctcagtgcaacgtggtggtgcgctatgggctcctgacc
aatgagatctccatggtccaggcccggggtcgtgctcgagctggtcagagtgtgtactcc
ttcctggctacagaaggcagtcgggaagtgaaacgggagctaaccaatgaggccctggaa
gcattgatggagcaggcagtggctgctatacagaatatggaccctgatgagttcaagacc
aagatccaggacctgcagctagcagccctagttaagcgagcagctcgtgccgcccatcgg
gagagccagcagaggcagttctcaccagagcgggtgcaacttctctgcatcaactgtatg
gtggctgtgggctacgggagtgacctgcggaaggtggagggcacccaccacgtcaatgtg
aaccccaacttctcagtctactatactacctcccaggagcctgtggccattaacaaggtc
tttaaacactggacacctggaggaatcgtcagatgcagtaactgtggggaggtgtggggc
ttccagatgatctacaaatcagtgaccttaccggtgctcaaaatcagaagcatgctactg
gagacccctcacgggaagatccaggccaaaaagtggtcccgggtgcctttctcaatacct
gactacgacatcctgcaggactgcacccaaagcctgtctgatctctctctggactga
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