Arvicanthis niloticus (African grass rat): 117710549
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Entry
117710549 CDS
T08817
Symbol
Med13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
117710549 (Med13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117710549 (Med13)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117710549 (Med13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
117710549
NCBI-ProteinID:
XP_034361368
EnsemblRapid:
ENSANLG00005005956
LinkDB
All DBs
Position
6:35768345..35857197
Genome browser
AA seq
2171 aa
AA seq
DB search
MSSSFVSNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGKDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVDI
NQHQPVYLLSEEHVTLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISCGLKEMSEEKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSH
CSASCLGIHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSAQKWVKFSSVSDGFSTDST
SHHGGKIPRKLANHVVDRVWQECNMNRLQNKRKYSATSSGLCEEETADKIGCWDFVEATQ
RTSCSCLRHKSLKTRNTGQQGQAPSLGQQQQVLPKHKTNEKQEKSEKPQKRPLTPFHHRV
SISDDIGMDTDSASQRLVISAADSQVRFSNIRTNDVAKTPQMHGTELANSPQPPPLSPHP
CDVVDEGVTKTPSTPQSQHFYQMPTPDPLVPTKPMEDRIDSLSQSFPPPFQEAVEPTVYV
GTAVSLEEDEANVAWKYYKVPKKKDIEFLPPQLPNDKFKDDPVGPFGQESVTSVTELMVQ
CKKPLKVSDEIVQQYQIKNQYLSAIASDTEQEPKIDPYAFVEGDEEFIFTDKKDRQNSER
EVGKKHKVEDGTSAVTVLSHEEDAMSLFSPSKQDAPRPTNHARPPSTSLIYDSDLAVSYT
DLDNLFNSDEDELTPGSKKSASGSDDKANSKESKTGSLDPLSCISTADLHKMYPTPPSLE
QHIMGFSPMNMNNKEYGSVDTVPGGTVLEGNSSSVGTQFRIEVEEGFCSPKPSEIKDFSY
VYKPENCQVLVGCSMFAPLKTLPSHCLPPIKLPEECVYRQSWTVGKLDLLPSGPSMPFIK
EGDGSNLDQDYGPAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTPRTP
RGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESV
MNLFKDCNFESCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSGLF
LEDELDIIGRNTDCGKEAEKRFEALRASSVENVNGGLKESEKVPDELILLLQDQCTNLFS
PFGAADQDPFPKVGISSNWVRVEERDCCSDCCLALEHGRQFMDNMSGGKVDEALVRSSCL
HPWAKQNDGSVQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGS
YGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEAL
LNGARSFFRDLTAIYESCRLGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADG
NNEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNATA
PSATLASAASSTMTMTSGVAISTSVATANSTLTTTSSSSSSSMSSGVSSNKLPSFPPFGS
MNTSGTGSMSAQASTVQSGQLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVG
IPTDGDSHAITYPPAIVVYIIDPFSYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKS
TVSVQIVPCQYLLQPVKHDDRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLA
METALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWI
LASCTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIG
RLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSF
VIMPDSVSTGSVFGRSTTLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDL
AFNPNNDGADGMGIFDLLDTGDDLDPDIINILPASPTASPVHSPGSHYPHGGDAGKGQGT
DRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLH
VPSVQSDELLYSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHFVVL
NQLYNFIMNML
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctccttcgtgtcgaacggggccagcctggaagattgtcactgtaacctcttc
tgcctggctgacttgacaggaattaagtggaaaagatatgtatggcaaggcccaacttct
gcccctattctgtttccggtgacagaagaagaccccattttgagcagttttagtcgatgc
cttaaggcagatgtacttggtgtttggcggcgagatcaaagacctggaagaagagaattg
tggatattttggtggggtaaagatcccaattttgctgaccttattcaccatgacttatca
gaagaggaagatggtgtatgggagaatggcctttcctatgaatgccgtactttgcttttc
aaagcagttcacaatctgttggagcgatgtttaatgaaccgaaactttgtacgaattggc
aagtggtttgtgaagccatatgagaaagatgaaaaacctataaataaaagtgaacacttg
tcctgctctttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggatatt
aaccaacatcaacctgtataccttctcagtgaagagcatgtcacccttgctcaacagtct
aatagcccatttcaagttatcttaagtccatttggactaaatggcactctcacgggacag
gctttcaagatgtctgattcagctacgaaaaaattaattggtgaatggaagcagttctat
cctatttcatgtggtttgaaggagatgtctgaggaaaaacaggaagatatggattgggaa
gatgattctttggctgcagtggaagttcttgttgcgggtgtccgaatgatctacccagca
tgctttgttctagtccctcaatcagacattcctactcctagctctgtgggatcctctcac
tgttcagcttcttgcttgggtatccatcaagtgcctgcttccacaagagatcctgctatg
tcttcggtgactctcactccacccacatctcctgaggaagttcagacagttgatcctcag
tctgcacagaagtgggtcaaattttcttcagtatccgatggcttcagcactgacagtact
agccatcatggtgggaaaatacccagaaaattagcaaatcatgtggtggatagagtctgg
caagaatgtaatatgaacagattacagaacaagaggaagtattctgctacatccagtggc
ctgtgtgaggaagagacagctgataaaataggatgctgggactttgttgaagccacacaa
agaacaagctgcagttgtttgaggcataaaagtctcaaaacaagaaatactgggcaacaa
ggacaggcaccatctttagggcagcaacagcaagtacttcctaagcacaagaccaatgag
aagcaagaaaagagtgagaagccacaaaagcgccccttgacaccttttcaccatcgtgta
tcaattagtgatgatattggcatggacacagattcagccagccaaagacttgtgatctct
gctgcagatagtcaagtgagattttcaaatatccgaactaatgatgtagcaaagactcct
cagatgcatggcactgaactggcaaattcacctcagcctcccccacttagtcctcatcca
tgtgatgtggttgatgaaggagtgactaaaacaccttcaactccccagagtcaacatttt
tatcaaatgccaacaccggatcccttggttcctaccaaaccaatggaagataggatagac
agtttgtcccagtctttcccacctccatttcaggaagcggtagaacctaccgtgtatgtt
ggtacagcagtaagcttggaagaagatgaagctaatgtagcctggaagtattacaaagtc
ccaaagaaaaaagatatagaatttttaccacctcaacttccaaatgataaattcaaggat
gatccagttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcag
tgtaagaagcctttaaaagtttctgatgaaatagtccagcaatatcaaattaaaaatcag
tatctttcagcaatagcatctgatacagaacaagaacctaaaattgatccatatgcattt
gttgaaggagatgaggaattcatttttactgataaaaaggatagacaaaatagtgagaga
gaagttgggaagaaacacaaggtggaagatgggacatctgctgtcacagtgttatcacat
gaagaagatgctatgtcattatttagtccctctaagcaagatgctccacgccctactaat
catgcccgtcctccatcaaccagtttgatttatgactctgatctggcagtgtcttatact
gaccttgataacctcttcaattctgatgaagatgaattaacacctggatctaaaaaatca
gcaagtggatcagatgataaagccaactccaaagaatcaaagacaggaagtctggatccg
ttatcttgtataagcactgcagaccttcacaaaatgtaccccacgccaccgtcactggaa
cagcacattatgggcttctctccaatgaatatgaataacaaagaatacggtagtgtggac
acagtacctggaggaactgtcctggaaggaaatagctctagtgtaggaacacagttcaga
attgaggttgaggaaggattctgtagccctaaaccttctgaaattaaagatttttcttat
gtctataagcctgaaaattgtcaagttctagtaggatgttccatgtttgcacctttaaaa
actctaccaagccattgtctgcctcctatcaaattgccagaagagtgtgtttaccggcag
agctggactgttggaaaattggacttgcttccttcaggcccttcaatgccattcatcaaa
gagggtgatggcagtaatttggatcaagactatggtcccgcctacacaccgcaaacccat
acttcttttgggatgcctccgagcagcgcacctcctagtaatagtggagcaggaattctt
ccttcaccatccacccctaggtttccgactccaaggactccaaggactcccaggactcct
cgtggagctggtggacctgctagtgctcaaggttcagtcaagtatgagaattcagacttg
tattcaccagcttccaccccatctacatgcagacccctcaattctgttgaacccgcaact
gtcccttccatccctgaagcgcacagtctttatgtaaacctcatcctttcagaatcagta
atgaatttgtttaaagactgtaattttgaaagttgctgtatttgtgtctgcaacatgaat
atcaagggtgccgatgttggagtttacattccagacccaacgcaggaagcacagtatcgg
tgtacctgcggcttcagtgctgtcatgaaccgaaaatttggaaataattcaggattattt
cttgaagatgaacttgacatcataggacgtaacacagactgtggcaaagaagcagaaaaa
cgttttgaagctctcagggcttcctctgtggaaaatgttaatggaggcctaaaggaatct
gaaaaggtgcctgatgaattgatattactgcttcaagatcaatgcactaatttattttca
ccctttggagcggcagaccaagatccttttcccaaagtgggtataagtagcaattgggtg
cgtgttgaggagcgggactgttgtagtgactgctgtctggccttagaacatgggcgtcaa
ttcatggacaacatgtcaggaggaaaagttgatgaagcacttgtcagaagctcatgctta
cacccatgggccaagcaaaatgatgggagtgtgcagtgttcacaggatatacttcggatg
ctcctttctcttcagccagttcttcaagatgctattcagaaaaaaagaacagtgaggcct
tggggggttcaaggtcctctcacatggcaacaatttcataagatggctggccgaggctct
tatggaactgatgaatctccggaaccactgccgattcccacgtttttgttgggttatgat
tatgattttctggtgctttctccatttgctctcccttactgggagaaacttatgctggaa
ccttatggatctcaaagagatatagcctatgttgtactctgtccagagaacgaagcgttg
ttaaatggagccagaagcttttttagagatctcactgcaatatacgagtcctgtcgattg
ggccaacacagacctatttctcgactgttgacggatgggatcatgaaagttggagctact
gcatcaaagaaactttcagaaaagtttgtaacagaatggttttctcaggcagctgatggt
aacaatgaagcattttctaaactgaagctgtatgcacaagtctgcagatacgatttaggt
ccatatcttgcttctcagccgttggacagctctctgctctcccagccaaatttagttgcc
cctccaaatcagtctttggttactgcacctcagatgacaaatactggaaacgctactgct
ccatctgccaccttagcatctgcggcaagtagcactatgaccatgacttcaggtgttgcc
atatctacttcagttgccacagctaattcaactttgaccacaacttcatcttcatcatct
tccagtatgagtagtggagtatcatcaaataaactgccttcgtttccaccctttggcagt
atgaacactagtggtacaggatccatgtctgcacaagcaagtacggttcagagtggccag
ctaggaggacagcagtcatcatctctgcaggcagccggaatatcaggggagtcggcttca
cttcccactcagccacatcctgatgtgtctgaaagcacaatggatcgggataaagtgggg
attcccacagatggtgattcacatgcaattacctacccacctgcaattgttgtttatata
attgatcctttttcatatgaaaataaagatgagagcactaactcttctaatgtatggact
ttggggcttcttcgttgcttcttggaaatggtccagactcttcctcctcatatcaaaagt
actgtttctgtacagattgttccttgtcagtacctgttacaacctgtgaaacacgatgac
agacaaatctactcccagcatttaaaatctttggctttttcggtgtttacccagtgtcgg
agaccacttccaacatcaaccaatgtaaaaacacttactgggtttggtccgggcttagct
atggaaactgctcttaaaagtcctgatagaccagagtgcattcgactttatacaccacct
tttattctggctcctgtgaaggacaaacaaacagagctaggagagacctttggagaagct
ggacagaaatacaatgttctttttgtgggctactgtttatcacatgatcaaaggtggatt
cttgcatcttgcacagatctgtatggagaacttctagaaacatgtatcattaacatcgat
gttccaaatagggcccgtcggaaaaagggttctgctagaagatttggcctacagaaactc
tgggagtggtgcttaggacttgttcagatgagctcattaccatggagagttgtcattggt
cgtctggggaggattggacatggagaattgaaagattggagttgtttgctgagtcgtcga
aacttgcagtctctaagcaaaaggctcaaagacatgtgtaggatgtgtggcatatctgcc
gcagactctccgagtatccttagtgcttgtttggttgcgatggaaccccaaggttctttt
gttatcatgccagattctgtgtcaactggttctgtttttggaagaagcaccactctaaat
atgcagacacctcagctaaataccccacaagatacatcctgtactcatatacttgtgttc
cctacttctgcttctgttcaagtagcttcagctacttacaccactgaaaatttggattta
gctttcaatcccaacaatgatggagcagatggaatgggtatcttcgatttattagacaca
ggagatgatcttgatcctgatatcattaatatccttcctgcatctccaactgcatctcct
gtacattctccaggctctcattacccccatggaggtgatgctggcaagggtcagggtact
gatcggctactttcaacagaatcgcatgatgaagtaactaatattcttcaacaaccattg
gcccttggatactttgtatcaactgccaaagcgggtccattacctgactggttctggtca
gcatgtcctcaagcacaatatcaatgccccctttttcttaaggcctctttgcacctccac
gtgccttcagtgcaatccgacgagctgctttacagcaaacactcccacccactggactca
aaccagacctcagatgtcctcaggtttgttttggaacagtacaatgcactctcgtggcta
acctgtgaccctgcaatccaggacagacgctcatgtctcccaattcattttgtggtgctg
aatcagttatataactttatcatgaatatgctgtga
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integrated database retrieval system
