Arvicanthis niloticus (African grass rat): 117715252
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Entry
117715252 CDS
T08817
Symbol
Ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04010
MAPK signaling pathway
anu04020
Calcium signaling pathway
anu04151
PI3K-Akt signaling pathway
anu05200
Pathways in cancer
anu05216
Thyroid cancer
anu05223
Non-small cell lung cancer
anu05230
Central carbon metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117715252 (Ret)
04020 Calcium signaling pathway
117715252 (Ret)
04151 PI3K-Akt signaling pathway
117715252 (Ret)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117715252 (Ret)
05230 Central carbon metabolism in cancer
117715252 (Ret)
09162 Cancer: specific types
05216 Thyroid cancer
117715252 (Ret)
05223 Non-small cell lung cancer
117715252 (Ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
anu01001
]
117715252 (Ret)
Enzymes [BR:
anu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117715252 (Ret)
Protein kinases [BR:
anu01001
]
Receptor tyrosine kinases (RTK)
RET family
117715252 (Ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD1
RET_CLD4
RET_CLD3
Pkinase
Cadherin
RIO1
Pkinase_fungal
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
117715252
NCBI-ProteinID:
XP_034367864
EnsemblRapid:
ENSANLG00005010421
LinkDB
All DBs
Position
9:complement(56109502..56154095)
Genome browser
AA seq
1115 aa
AA seq
DB search
MAKATSGAAGLGLKLFLLLPLLGEAPLGLYFSRDAYWERLYVDQPAGTPLLYVHALRDAP
GEVPSFRLGQHLYGVYRTRLHENDWIRINETTGLLYLNQSLDHSSWEQLSIRNGGFPLLT
IFLQVFLGSTAQREGECHWPSCARVYFSFINDTFPNCSSFKAQDLCIPETGVSFRIRENR
PPGTFYRFHMLPVQFLCPNISVKYSLLEGDSLPFRCDPDCLEVSTRWALDRELREKYTLE
AECVVVGTGANKEKVTVSFPVTVYDEDDSAPTFSGGVGTASAVVEFKRKEGTVVATLQVF
DADVVPASGELVKRYTSTLLSGDSWAQQTFRVEHSPIETMVQANNNSVRATMHNYKLVLN
RSLSISESRVLQLVVLVNDSDFQGPGSGVIYLHFNVSVLPVTLNLPRTYSYPVNRRARRY
AQIGKVCVENCQEFSGVSVQYKLQSSSTNCTALGVVTSPKDTSGILFVNDTEALRRPECT
ELQYTVVATDRQTRRQTQASLVITVEGASIAEEVGCPKSCAVNKRRPECEECGGLGSPSG
RCEWRQGDGKGITRNFSTCSPSTRTCPDGYCDAVESRDVNICPQDCLNADIVGGHERGES
QGIKAGYGICNCFPDEKKCFCEPEDSQGPLCDELCRTVIIAAVLFSFIISVLLSTFCIHR
YHKHAHKPPIASAEMTFCRPAQGFPISYSSSGTRRPSLDSMENQVSVDSFKIPEDPKWEF
PRKNLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASQSELRDLLSEFNLL
KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRDSRKIGPAYVSSGDGRNSSSLD
HPDERVLTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV
YEEDSYVKKSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER
LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKSRDYLDLA
ASTPSDSLLYDDGLSEEETPLVDCNNAPLPRSLPSTWIENKLYGMSDPNWPGESPVPLTR
ADGTSTGFPRYANDSVYANWMVSPSAAKLMDTFDS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcgacgtccggcgccgcagggctggggctgaagctatttttgctgctgccg
ctgctaggagaagccccactgggactctacttctcaagggatgcttactgggagaggctg
tatgtggaccagccagctggcacacctctgctctatgtccatgccctacgagatgcccct
ggagaagtgccaagcttccgcctgggccagcatctctatggcgtctaccgcacacggctg
catgagaatgactggatccgcatcaatgagactactggccttctctacctcaatcagagc
ctggaccacagttcctgggaacagctcagcatccgcaatggtggcttccccttgctcacc
atcttcctacaagtcttcctggggtccacagcccagagagagggagaatgccattggcca
agctgtgcccgtgtatacttctccttcatcaacgacaccttcccaaactgtagctccttc
aaagcccaggatctctgcatcccggagacaggtgtgtccttccgcatcagggagaacaga
cctcctggcaccttctaccggttccacatgttacccgtgcagttcctttgtcccaacatc
agtgtgaagtacagtctcttagaaggggacagtctgcccttccgttgtgacccagactgc
ctggaggtgagcactcgctgggcgctggatcgggagcttcgggagaagtatacgctggag
gctgagtgcgtagtagtaggcacgggtgccaacaaagagaaggtgactgtgtccttccca
gtgacagtgtacgatgaggacgactcggcgcccaccttctccggaggtgtgggcactgcc
agtgctgtggtggagtttaagcggaaggagggtactgtggtggccactctgcaggtgttt
gatgcagatgtggtgccagcatctggggagctggtgaaacgatacacaagcacactactc
tcaggggactcctgggcccagcagaccttccgggtggagcactcacccattgagaccatg
gtccaggccaacaacaactccgtgcgggcaaccatgcacaattacaagctggttctcaac
aggagcctctccatctcagagagccgagtcctgcagctagtggtcctggtcaatgactca
gacttccaggggcctgggtcaggtgtcatctaccttcatttcaatgtgtctgtgctgcct
gtcaccctgaacctacccaggacctactcctacccagtgaataggagggcccgccgttat
gcccagatcgggaaagtctgtgtggaaaactgccaggagttcagtggtgtctccgtccag
tacaagctgcagtcctccagcaccaactgcactgctctaggtgtggtcacatcgcccaag
gacacctcggggatcctatttgtaaatgacacagaggccttgcggcgacctgagtgcacc
gagcttcagtacacggtggtagccactgaccggcagacccgcaggcagacccaggcttcc
ttagtcatcacagtggagggggcatccattgctgaagaagtgggctgccccaagtcctgt
gcagtaaacaagaggcgacctgagtgtgaggagtgtggtggcctgggctctccatctggc
agatgcgagtggcgtcagggagatggtaaagggatcaccaggaacttctccacctgctcc
cccagtaccaggacctgccctgatggctactgtgatgctgtggagagccgggatgtcaac
atttgcccccaggactgtctcaatgccgacattgttggagggcacgagcgaggggagtcc
cagggcattaaagccggctatggcatctgcaactgttttcctgatgagaagaagtgcttc
tgcgagccagaggacagccagggcccgttgtgtgacgagctgtgccgcacggtcatcata
gccgctgtcctcttctccttcatcatctctgtcctgctgtccaccttctgcatccaccgt
taccacaagcatgcgcacaagcctcccattgcgtcagcggaaatgaccttctgccggccg
gcccagggcttcccaatcagctattcctcctcaggcacccgccggccctcactggattcc
atggagaaccaggtctctgtggactccttcaagatcccggaggacccaaagtgggagttt
cctcggaagaacttagttcttgggaaaaccctgggagaaggcgagtttggaaaagtcgtc
aaggccacagccttccggctgaaaggccgggcaggatataccacagtagctgtaaaaatg
ctgaaagaaaacgcctcccagagtgaattacgagacctgctctctgagttcaaccttctg
aaacaagtcaaccatccacatgtcatcaagttgtatggggcctgcagccaggatgggcca
cttcttctcatcgtggagtatgccaagtacggctccctgaggggatttctccgtgacagc
cgcaagatcgggcctgcctacgtgagcagtggagacggccgcaactccagctccctggac
cacccagatgaaagggtactgaccatgggtgacctcatctccttcgcctggcagatctcc
aggggtatgcagtacttggctgaaatgaagctcgtgcatcgggacctagctgccaggaac
atcttggtggctgagggccggaagatgaagatttctgacttcgggctgtcccgggatgtt
tatgaagaagattcctatgtgaagaaaagcaagggccggattcccgtcaaatggatggca
attgagtctctcttcgaccatatctataccactcaaagtgatgtgtggtcttttggagtg
ctgctatgggagatcgtgaccctgggaggcaacccctaccctggaattcctcctgaacga
ctcttcaaccttctgaagacaggccacaggatggagaggccagacaactgcagtgaggaa
atgtaccgcctgatgctgcagtgctggaagcaggagccagacaagcggccagtgtttgct
gacatcagcaaggatctggagaagatgatggtcaagagcagagactacttggacctggct
gcatccaccccttcagactcactgctctatgacgatgggctctcagaagaggagacaccc
ctggtggactgtaacaatgctcccctcccgcgctccctcccttccacatggattgaaaac
aaactctatggcatgtcagacccgaactggcctggagagagtcctgtaccactcacgaga
gccgatggcactagcactgggttcccaagatatgcaaatgatagtgtatatgctaactgg
atggtttcaccctcagcggcaaaattaatggacacatttgatagctaa
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integrated database retrieval system
