Arvicanthis niloticus (African grass rat): 117717813
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Entry
117717813 CDS
T08817
Symbol
Tiam1
Name
(RefSeq) LOW QUALITY PROTEIN: T-lymphoma invasion and metastasis-inducing protein 1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04014
Ras signaling pathway
anu04015
Rap1 signaling pathway
anu04024
cAMP signaling pathway
anu04062
Chemokine signaling pathway
anu04530
Tight junction
anu04810
Regulation of actin cytoskeleton
anu05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
117717813 (Tiam1)
04015 Rap1 signaling pathway
117717813 (Tiam1)
04024 cAMP signaling pathway
117717813 (Tiam1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117717813 (Tiam1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117717813 (Tiam1)
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
117717813 (Tiam1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
117717813 (Tiam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117717813 (Tiam1)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
117717813 (Tiam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PDZ_6
PDZ_2
PH_11
RNA_pol_Rpc82
Motif
Other DBs
NCBI-GeneID:
117717813
NCBI-ProteinID:
XP_034371109
EnsemblRapid:
ENSANLG00005008459
LinkDB
All DBs
Position
12:complement(71190431..71367624)
Genome browser
AA seq
1591 aa
AA seq
DB search
MGNAESQNVDHEFYGEKQCQPGRKHTSRSLRLSHKTRRTRHASSGKAIHRNSEVSTRSSS
TPSIPQSLAENGLEPFSQEGALDDFGDPIWVDRVDMGLRPVSYTDSSVTPSVDGSIVLTA
ASVQSMPDSEESRLYGDDAAYLAEGGRRQRPYTSNGPTFMETASFKKKRSKSADIWREDS
LEFSLSDLSQEHLTSNEEILGSAEEKDCEEARGMETEASPRQLSTCQRANSLGDLYAQKN
SGAKANGGPRNRFSSYCRNLVSDIPDLAKHKMPPAAAEETPPYSNYNTLPCRKSHCLSEG
ATNPQISLSKSMQGRRAKTTQDVNTGEGSEFADSGIEGATTDTDLLSRRSNATNSSYSPP
TGRAFVGSDSGSSSTGDAARQGVYENFRRELEMSTTNSESLEEAGSAHSDEQSSGTLSSP
GQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETD
GRSGIDHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWIT
AIHSACAAAVARHHHKEDTLRLLKSEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTI
LDQIFVWEQNLEQFQMDLFRFRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVS
SFHALVAARTGEIGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPTINQVFGEGT
DAVKRSLEGIFDDTVPDGKREKEVVLPSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTV
VRPGDTARDTLELICKAHQLDHSAHYLRLKFLMENRMQLYIPQPEEDIYELLYKEIEICP
KVTRNIHIEKSDTAADNYGFLLSSVDEEGIRRLYVSSVKETGLASKKGLKAGDEILQINN
RAAGTLNSSMLKDFLSQPSLGLLVRTYPEPEGGLELLENPPHRVDGPVDLGESPLAFLTS
NQGHSLSSEQGSSAETAPEEGEGPDLESSDETDHSSKSTEQVTAFCRSLHEMSPSDSSPS
PQDATSPQLATTRQLSDADKLRKVICELLGTERTYVKDLNCLMERYLKPLQKETFLTQDE
LDVLFGNLTEMVEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFK
LYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRQQHSSTLESYLIKPIQRVLKYPLLL
RELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAVFDQLIAEQTGEKKEVA
DLSMGDLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRL
SIYEEWDPFRFRHMIPTEALQVRALPSADAEANTVCEIVHVKSESEGRPERVFHLCCSSP
ESRKDFLKSVHSILRDKHRRQLLKTESLPSAQQYVPFGGKRLCALKGARPAMSRAVSAPS
KSLGRRRRRLARNRFTIDSDAISASSPEKEPQQPPGGGDTDRWVEEQFDLAQYEEQDDVK
ETDILSDDDDFCEAVKGASVDRDLQEQLQAASISQRARGRRTLDSHASRMTQLKKQAALS
GINGGLESASEEVIWVRREDFAPSRKLNTEI
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcagaaagccaaaatgtagaccacgagttttatggagaaaagcaatgccag
cctggtcggaagcacacatcacgctccctgcgattgtcacacaagacccggaggacaagg
catgcttcctccgggaaggcgatccacaggaactccgaagtgagcacccggtccagcagc
acccccagcatcccccagtccctggctgaaaatggcttggagcccttctcccaagaaggc
gccctagacgactttggggaccccatctgggtggaccgagtagatatgggcttgagaccc
gtatcttacaccgattcttctgttacacccagcgtagacggtagcatcgtcctcacggca
gcctctgtgcagagcatgccagactcggaggagagccggctttacggggatgacgctgcg
tacttggctgagggaggcaggaggcagcgcccctatacatccaacgggcccacgttcatg
gagacggcaagcttcaagaagaagcgctccaaatctgcagacatctggcgggaggacagc
ctggagttctcactctcagatctgagccaagaacatttaacaagcaacgaagagatcttg
ggttccgcggaagagaaggattgcgaggaggctcgggggatggaaacagaggcgagtccc
cggcagctcagcacctgtcagcgagccaactccctgggtgacttgtatgctcagaaaaac
tctggggcgaaggctaacggaggacccaggaacagattttcaagctactgccggaatttg
gtgtcggatattcccgatctcgcaaagcataagatgccaccggctgctgctgaagagact
cctccatacagtaattataacacacttccctgtaggaagtcgcactgtctttccgaaggt
gccaccaacccacaaattagccttagcaagagcatgcaaggcagaagagcaaaaaccacc
caggatgttaacacaggtgagggcagcgagtttgcagacagtgggatcgaaggggccacc
accgacacggacctcctgtccaggagatccaatgccaccaactccagctactcgcccccc
acaggccgagcctttgtgggcagcgacagcggcagcagttcgacgggggatgctgcacgc
cagggggtgtacgagaacttcaggcgggaactggagatgagcactaccaacagtgagagc
ctggaggaggctggctctgcgcacagcgatgagcagagcagcggaaccctcagctcccca
ggccagtcggacatcctgctgacggctgcgcagggcactgtacggaaggctggcgcgctg
gcagtgaagaacttcctagtacacaagaagaataagaaggtggagtcggccacccggagg
aagtggaagcactactgggtgtctctgaaaggttgcacactctttttctacgagactgat
ggcaggtctgggatagaccacaacagtgtccccaagcatgctgtctgggtggagaacagc
atcgtgcaggctgtacccgagcaccccaagaaagactttgtcttctgcctcagcaactcc
ctgggcgacgccttcctcttccagaccacgagccagacagagctagaaaactggatcacc
gccatccactcggcctgcgcagctgccgtcgcaagacaccaccacaaggaagacacgctc
cgcctcctcaagtcagaaatcaagaaactggagcagaagatcgacatggacgagaagatg
aagaagatgggggagatgcagctgtcttcagtcaccgactcgaagaagaagaagaccata
ctagaccagatcttcgtctgggagcagaacctcgagcagttccagatggacctcttccgt
ttccgttgttacttagccagcctccagggtggggagctgccaaaccccaaaaggctgctt
gcctttgcaagccggcccacaaaggtggccatgggccgccttgggatcttctccgtgtca
tcttttcatgccctggtggcagcccggactggtgagatcggagtgagaaggcgtactcag
gctatgtccaggtctgcaagcaagcgaaggagcaggttttcttctctctggggcctagac
actacctctaaaaagaagcagggacgtccaaccatcaaccaggtgtttggagaggggact
gatgctgtaaagagatctttagaaggaatatttgatgacacggttccggacggcaagagg
gagaaggaagtggtcttacccagtgtccaccagcacaatcctgactgtgacatttgggtc
catgaatatttcactccatcctggttctgcctacccaacaatcagccagccttgacggtt
gtccggccaggggacactgcgagggacaccttggagctcatttgtaaggcacatcaactg
gatcattccgcccattacctgcgcctgaaattcctaatggagaacaggatgcagctctac
attccgcagcctgaggaggacatttacgagctgctttacaaagaaattgaaatctgtcca
aaagtcacccggaatatccacattgagaagtcagacacggccgctgataattacgggttt
ttgctttcttctgtggatgaagaaggcattcgaaggctctacgtgagcagcgtcaaggaa
accgggttagcttccaagaaaggcctgaaggcgggggatgagattctccagatcaataat
cgtgctgctggtaccctgaactcatctatgctcaaagatttcctctcacagccctccctg
ggcctcctggtgaggacctaccctgagccagagggaggactggagctgctggagaaccca
ccccaccgagtggacggccctgtggaccttggcgagagccccctcgccttcctcaccagc
aaccaagggcacagcctctccagtgagcagggcagcagcgccgagacagctccagaagag
ggcgaaggaccggacttggagtcttctgacgagacggatcacagcagcaagagcacagaa
caggtcacagcgttttgccggagtctgcacgagatgagtccctctgactccagcccatct
cctcaggacgccacgagccctcagctggcaaccacgcgacagctgtcggatgccgacaaa
ctgcgcaaggtgatctgcgagctgctggggacagagcgcacctatgtgaaagacttgaac
tgcctcatggaaagatacctgaagccccttcagaaggagacctttctcacccaggatgag
cttgatgtactctttggaaatttaactgaaatggtggagtttcaagtcgagttccttaaa
actctagaagatggagtgagattggtccctgacttggaaaagcttgagaaagttgaccaa
ttcaagaaagtgctgttctctctggggggatccttcctgtactacgcggaccgcttcaag
ctctacagtgccttctgtgcgagccacacaaaagtccccaaggtcctggtgaaagccaag
acggacacggccttcaaggcgttcctggatgcccagaacccgaggcagcagcattcatcc
acgctggagtcttacctcatcaagcccattcagagggtcctcaagtacccgcttctgctc
agggagctgtttgcactgaccgatgcggagagtgaggagcactaccacctggatgtggcc
atcaagactatgaacaaagttgccagtcacatcaatgagatgcagaagatccatgaagag
tttggtgctgtgtttgaccagttgattgctgagcaaactggagagaagaaagaggtcgcg
gatctgagcatgggtgacctgctgttgcacaccagtgtcatctggctgaacccacccgcc
tcgctgggaaagtggaaaaaggagccagaattggcagcctttgtcttcaaaactgccgtg
gtccttgtgtataaagacggatccaagcagaagaagaaacttgttggctctcataggctg
tccatctatgaggagtgggaccctttcaggtttcgtcacatgatccctaccgaagctctg
caagtccgagctctgcccagtgcagatgcagaggcaaacaccgtgtgtgaaattgtccat
gtgaaatcagaatcggaagggaggcccgagcgggttttccacctctgctgcagctcccca
gagagccgaaaggattttctgaagtctgtgcattcgatcctgcgagataaacacagaaga
cagcttctcaaaacggaaagccttccctcagcccagcagtatgtcccttttggaggcaag
agattatgtgcgcttaaaggcgccaggccagccatgagcagggcagtgtctgccccaagc
aagtctcttgggaggaggaggcggcgactggcccgaaacaggtttaccattgattcagac
gccatctcagccagcagcccggagaaagagccccagcagccccccggcggcggggatact
gaccgatgggtagaggaacagtttgatcttgctcagtacgaggagcaggatgacgtcaag
gagacagacatcctcagtgacgatgacgacttctgtgaggcggtgaagggcgcctccgtg
gacagagacctgcaggagcagcttcaggctgcctccatcagtcagcgggcccgaggccgg
agaaccctcgatagccacgcctcccgcatgacgcagctcaagaagcaagcggccctgtcg
ggcatcaatgggggcctggagagtgcgagcgaggaagtcatttgggtcaggcgcgaagac
tttgccccctccaggaaactgaacacggagatatga
DBGET
integrated database retrieval system