Arvicanthis niloticus (African grass rat): 117719584
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Entry
117719584 CDS
T08817
Symbol
Thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117719584 (Thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
117719584 (Thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117719584 (Thoc1)
03041 Spliceosome [BR:
anu03041
]
117719584 (Thoc1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117719584 (Thoc1)
Spliceosome [BR:
anu03041
]
Complex C
Other components
EJC/TREX
117719584 (Thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117719584 (Thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
HsdM_N
Motif
Other DBs
NCBI-GeneID:
117719584
NCBI-ProteinID:
XP_034373653
EnsemblRapid:
ENSANLG00005014737
LinkDB
All DBs
Position
14:complement(75595272..75640111)
Genome browser
AA seq
657 aa
AA seq
DB search
MSPTPALFSLPEARTRFTKSTREALNNKNIKPLLNAFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSACENVLAIISLAIGGVTESVCTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERASDTKPTRVVRKRAAPE
DFLGKGPNKKILIGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPLTGEQIESFANKLGEQWKILAPYLEIKDSDIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATTDNLISALNKSGLSDLAESLTNDTETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccggcgcttttcagtttgcccgaagcgcggacgcggtttacgaaatct
accagagaagccttgaataacaaaaatatcaagccattgttgaatgccttcagtcagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctggaa
gaagaaattataaatcattcagcatgtgagaacgttttagctattatttctcttgctatt
gggggagtaaccgaaagtgtctgtactgcgtccacaccatttgtgctattgggagatgtc
ttagattgccttcctttggatcagtgtgacacaatattcacatttgtcgaaaaaaatgtt
gctacttggaagtcaaatacattctattctgctggcaaaaattacttactgcgtatgtgc
aatgatctcctcagaagattgtctaaatctcagaatacagttttctgtggaagaattcag
ctctttttggccaggctttttcctctatctgagaaatcaggtctcaatttgcagagtcag
tttaacctggaaaacgtcactgttttcaatacaaatgagcaggagagcaccctgggtcag
aagcatactgaggacagagaggaagggatggatgtagaagaaggtgaaatgggagatgat
gaagcccccacaacttgttctattccaattgattacaacctgtatagaaaattctggtca
cttcaggattacttcaggaacccagtacaatgctatgaaaagatttcatggaaaactttt
ctcaagtattctgaagaagttttagctgtttttaaaagttataaattagatgatactcaa
gcctccaggaaaaagatggaagaattgaaaacaggaggagagcatgtatactttgcaaag
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgccgacac
attctgttgcagtatctcattttatttcagtatctcaagggacaggtcaaattcaaaagt
tccaattatgttttaactgatgagcagtcactctggattgaagacactacaaaatcagtc
taccaactgctatctgaaaatccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaattggaactcatggaaaaatgaaggttgcccaagttttgtg
aaagaaagagcatcagataccaagcccacaagagtggtgcggaagagagcagccccagaa
gacttcttaggcaaagggcccaacaagaaaatcctgattggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagagaatacatg
ccaactttggaggaattctttgaagaagccattgaacaagcagatcctgaaaacatggtt
gaaagtgaatataaagccgtaaataattcaaattatggatggagagctcttagactctta
gcccggagaagccctcacttcttccagccaaccaaccagcagtttaagagtctgccagag
tatcttgaaaacatggtaataaagctagccaaggaactaccacccccttctgaagaaata
aaaacaggtgaggatgaagatgaagaagataatgatgctttactcaaggaaaatgaaagt
ccagatgttcgacgagataaacctctaacaggggaacagatagagtcatttgccaacaaa
cttggtgaacagtggaagattttggctccttacctggaaattaaagactctgatattagg
cagattgagtgtgacagtgaagacatgaagatgagagccaagcagctccttgttgcctgg
caagaccaagaaggagttcatgcaacaactgataacctgattagtgcactaaacaagtct
ggattaagtgaccttgcagaaagtctaactaatgacactgaaacaaacagttag
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integrated database retrieval system
