Arvicanthis niloticus (African grass rat): 117719780
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Entry
117719780 CDS
T08817
Symbol
Trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117719780 (Trappc8)
Membrane trafficking [BR:
anu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117719780 (Trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
117719780
NCBI-ProteinID:
XP_034373970
EnsemblRapid:
ENSANLG00005011674
LinkDB
All DBs
Position
14:65557852..65633011
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AA seq
1442 aa
AA seq
DB search
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLNHLSFAELLKPFSRLTSEVHMRDPNN
QLHIIKNLKIAVSNIVTQPPQPGAIGKLLNDVVSGSQPAEGLVANVITAGDYDLNISATT
PWFESYRETFLQSMPASDHEFLNHYLACMLVASSGEAEPMEQFSKLSQEQHRIQHNNDYS
YPKWFIPNTLKYYVLLHDVTSGDEQRAESIYEEMKQKYGTQGCYLLKINSRAPNRASDEQ
IPDPWSQYLQKNSIQNQESYEDGPCTMTSRKNSDSNLLSLDGLDNEVKDGLPNNFRVHPL
QIDQCGDPPNNTDGSDYAKSAASVHETKKASTGVIRGARLTLTDHDRIRQFIQEFTFRGL
LPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINELKNTSGLLYPPEAPE
LQIRKMADLCFLVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPY
PAHYMDTAIQTYRDICKNMVLAERCVLLSAEILKSQSKYSEAAALLIRLTSEQNTWKGLD
SDLRSALLLEQAAHCFINMKSPMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKG
KGWSLAEDHINFTIGRQSYTLRQLDNAVSAFRHILINESQQSAAQQGAFLREYLYVYKTV
NQLSPDGPLPQLPLPYVNSSATRVFFGHDRRPADGEKQAATHISLDQEYDSESSQQWREL
EEHVVAVANKGVLPSSFHPTQYCLNSYSDNSRFPLAVVEEPITVEVAFRNPLKVPLLLSD
LSLLWKFQPKDASGKDIEKVKERVTGEPEMIGTEVISEFLINSEESKVARLKLFPHHIGE
LHILGVVYNLGTIQGSVTVDGIGALPGCHTGKHSLSMSVRGRQDLEIQGPRLNNTKEEKT
SVKYGPDRRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSKCPLTGLKVVSK
RPEFFTFGGNTAALTPLSPSTSENCSAYKTVVTASPSLGTALVSTASSVDFGTGTGQQLE
AIPVPLPDSVLLPGASIQLPMWLRGPDEEGVHEINFLFYYESVKRQPKKRHRILRHTAVI
CTSRSLNVRATVCRSNSLEGEEGRGGNMLVFVDVENTNTSEAGVKEFHMVQVSSSSKHWQ
LHKSVNISENKDAKLASREKGKFCFKAVRCKQKEGGIQPSEKYTFADIIFGNEQIISSAS
PCADFFYRSLSSELKKTQDQLSAYAEKHTAEGAVRLIEKCSEVDLSIVILWKAYVVEDNK
QLILEGQHHVVLRTVGKEAFSHSQKQEPPEMELLKFFRPENTTVSTRPSIEQLSNLIKTS
LHYPESFHHPFHQKSLCLVPVTLLLSNCSKADVDVIVDLRHKTTSPEALETHGSFTWLGQ
TQYKLQLKSQETHSLQLKACFVHTGVYNLGTPRVFAKLSDQVTVFETSQQNSMPALIIIN
NA
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagctcatccccgactccttcgttccctgcgtc
gccgcgctgtgcagcgacgaagccgagcggctcacccgcctcaaccacctcagcttcgcc
gagctcctcaagcccttttctcgcctcacttctgaagttcacatgagagatcctaataat
caactgcatataattaaaaatttgaagatagcagtaagcaacattgtcacccagccacct
cagccgggagccattgggaagcttttgaatgatgttgtttctggcagccagcctgcagaa
ggattagtcgctaatgtgattacagcgggagattatgaccttaacatcagtgctactact
ccatggttcgagtcttacagagaaacttttctgcagtccatgccagcatcagatcatgag
tttctgaatcactatttagcatgtatgctggtggcatcgtctggtgaagctgagcctatg
gaacagttttccaagttgtcacaggaacagcaccgaattcagcacaacaatgactattcc
taccctaagtggtttatcccaaatacacttaaatattacgtgcttttgcatgatgtaact
tcaggagatgaacagagagctgaatcaatttatgaagaaatgaaacagaaatatggaact
cagggctgctatttacttaaaatcaattctcgagcaccaaatcgagcatcagatgaacag
ataccagatccttggagtcagtatctccagaaaaatagtattcaaaaccaggaatcatat
gaagatggcccttgtactatgacctccagaaagaattctgatagtaacttgctttcattg
gatggactagataatgaagtcaaagatggcttaccaaataacttcagagttcatccactt
caaatagaccagtgtggtgaccctcctaacaataccgatggctcagattatgcaaagtct
gctgcttcagtacacgagacaaagaaagcaagtactggagtgattcgtggtgctcgttta
acacttactgatcatgatagaattcgacagtttatacaagagtttacattccgtggcctt
ttgccacacatagagaaaacaattcgtcagttaaatgatcagctaatatcaagaaaaggt
ttgagtcgatctctgttttctgccactaagaaatggtttagtggtagtaaagttccagaa
aagagcattaatgagctgaagaatacatctgggttgttgtacccaccagaagcacctgag
cttcagatcaggaaaatggctgacttgtgctttttggtgcaacattatgatttggcttac
agttgttatcacactgcaaagaaggattttcttaatgatcaagcaatgctttatgcagca
ggtgccttggaaatggcagcagtgtcagcctttcttcagccaggagctcctaggccatac
cctgctcattacatggacacagcaattcagacatatagggatatctgcaagaatatggtg
ttggctgaaagatgtgtgttgcttagtgctgaaattttaaaaagtcaaagcaagtactca
gaggctgcagctcttctaatacggttgacaagtgagcagaacacatggaagggcctggat
tctgatctccgaagtgcacttcttttggaacaggctgcacattgcttcataaacatgaag
agccccatggttagaaagtacgcatttcatatgatcctagcaggccaccgttttagtaaa
gcagggcagaaaaagcatgctttacgctgctattgtcaagccatgcaagtttacaaagga
aaaggctggtctctggcagaggatcacatcaacttcaccatcgggcgccagtcctacacg
ctcaggcagctggacaatgccgtttccgctttcagacacattttaatcaatgaaagccaa
cagtcggctgctcagcagggagcctttctcagagagtatctttatgtttataagactgta
aatcagctgtcaccagatggcccgttaccacagcttcctttaccatacgttaacagctca
gcaacacgggttttctttggccatgacagacgaccagcagatggtgaaaagcaagcagca
actcatataagtctcgatcaagaatatgactctgagtcatcccagcagtggcgagagctt
gaggagcatgttgtggctgtggctaataaaggcgtacttccgtccagtttccaccctaca
cagtattgtttgaacagttactctgataactccagatttccacttgcagttgtagaagaa
ccaattactgtggaagtggcttttagaaaccctttaaaagttccacttttgctgtctgat
ttgtcattgctctggaagtttcagcctaaagatgccagtgggaaagacattgagaaagtt
aaagaacgagttacaggtgaacctgaaatgattggaactgaagttatttcagaattctta
attaacagtgaagaatctaaagtggcaagactgaagctctttccccatcacataggggag
ctgcacattctgggagttgtgtataatcttggcactattcagggctccgtgacagtagat
ggcattggtgctcttcctggatgtcacacaggaaaacattctctgagtatgtcagtccga
gggagacaggatttagaaattcaaggccctcgacttaacaacacgaaggaagagaagaca
tctgttaagtacggtcctgaccgacgtttggaccctataatcactgaggagatgccgctg
ctggaggtgttctttatacattttcctacagggctcctctgtggagaaatccgaaaggca
tatgtagaatttgtcaatgtcagcaagtgtcctctgactggattgaaagttgtgtctaaa
cgtccagagttcttcacttttggtggcaataccgctgctctaacacctctgagcccctcc
acatctgagaactgcagtgcctataagacagttgtgacagcttccccctccttggggaca
gcacttgtgtcaacagcatcatctgtggacttcggaactggcacaggacagcagctggag
gccattcctgtcccccttcctgactccgtgctactccctggagcttccatccagctgcca
atgtggcttcgtgggccagacgaagaaggtgtccatgaaattaactttttattttactat
gaaagtgttaaaaggcagcctaaaaaacgacacagaatattaagacatactgcagttatt
tgtactagccggtctttgaatgtgcgagccactgtctgcagaagtaattcacttgaaggt
gaagaaggcaggggcggcaatatgctagtcttcgtggatgtagaaaataccaatactagt
gaagcgggggtgaaggagttccacatggtgcaggtgtcaagtagtagcaagcactggcag
ctacacaaatccgtgaatatctccgaaaacaaagatgccaaacttgccagtagggagaag
gggaagttctgcttcaaagcagtaagatgtaaacaaaaagaaggtggtatacagccctca
gaaaaatatacttttgcagatatcatctttggaaatgaacagataataagttcagcaagt
ccatgtgcagatttcttttaccgaagtttatcctcagagctgaagaaaacacaagatcag
ctttccgcatatgcagagaagcacactgcagagggtgctgtgaggctgattgagaagtgc
agtgaggtggacctgagcattgtcatcctgtggaaggcatacgttgtagaggataacaag
cagcttattttagaaggccagcatcatgtcgttcttcgcactgttgggaaagaagccttt
tcacactctcaaaaacaggagccaccagaaatggaactattaaagtttttcaggccagaa
aacactacagtttccacgagaccatcaatagagcagctttctaatctcattaaaacaagt
ctccactacccggagtcatttcatcatccatttcatcagaaaagcctttgcttagtccca
gtcacccttttactttctaactgttctaaggctgacgtagatgtaatagttgatctccgg
cataaaacaacaagtcccgaggcattggaaactcacggctcgttcacgtggctcggacag
acacagtataagctccagctgaaaagccaagagacgcacagtttgcagctgaaggcttgc
tttgttcatacaggcgtttataaccttggaactccaagagtattcgccaagttatcggac
caggttacagtatttgaaacaagtcaacagaattccatgcctgctctgattatcatcaat
aatgcctga
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integrated database retrieval system
