KEGG   Arvicanthis niloticus (African grass rat): 117720592
Entry
117720592         CDS       T08817                                 
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu02010  ABC transporters
anu04976  Bile secretion
anu05206  MicroRNAs in cancer
anu05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    117720592
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    117720592
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    117720592
  09162 Cancer: specific types
   05226 Gastric cancer
    117720592
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:anu02000]
    117720592
   04147 Exosome [BR:anu04147]
    117720592
   04090 CD molecules [BR:anu04090]
    117720592
Enzymes [BR:anu01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     117720592
Transporters [BR:anu02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    117720592
Exosome [BR:anu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117720592
CD molecules [BR:anu04090]
 Proteins
  117720592
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_22 Zeta_toxin AAA_16 Rad17 RsgA_GTPase AAA_5 G-alpha AAA AAA_29 AAA_7 AAA_14 AAA_15 APS_kinase DUF815 AAA_30 AAA_25 nSTAND1 NTPase_1
Other DBs
NCBI-GeneID: 117720592
NCBI-ProteinID: XP_034375048
EnsemblRapid: ENSANLG00005023954
LinkDB
Position
15:62039398..62115947
AA seq 1289 aa
MGFEEDLNGSADKNFSKMGKKSKEEKKEKKPAVGVFGMFRYADWLDKLCIALGTLAAIIH
GTLLPLLMLVFGNMTDSFSKAENSILPSITNQSEINGTQIVSNNSLEEDMATYAYYYSGI
GAGVLIVAYIQVSLWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSK
INDGIGDKIGMFFQNITTFLAGFIIGFISGWKLTLVILAVSPLIGLSSALWAKVLTSFTN
KELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKNIGIRKTITASISIGI
AYLLVYAAYALAFWYGTTLVLSNEYSIGQVLTIFFSILLGTFSLGHLAPNIEAFANARGA
AFEIFKIIDNEPSIDSFSTKGYKPDSILGNLEFKNVHFNYPSRSEVKILKGLNLKVKSGQ
TVALVGNSGCGKSTTVQLMQRLYDPTEGVVSIDGQDIRTINVRYLREIIGVVSQEPVLFA
TTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAI
ARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGF
DGGVIVEQGSHDELMREKGIYFKLVMTQTKGNEVESGNNAYESQRDTDASELTSEESKSP
LIRRSIRRSIHRKQDQERRLSTKEAMDEDVPLVSFWRILKLNISEWPYFVVGVLCSVING
CLQPVFAIVFSRIVGVFSRDDDHETKQRNCNLFSLLFLVMGMISFVTYFFQGFTFGKAGE
ILTKRLRYMVFKSMLRQDISWFDDHKNSTGSLTTRLANDASHVKGAMGARLGVVTQNVAN
LGTGVILSLVYGWQLTLLLAVIIPLIVLGGMIEMKLLSGQALKDKKELEISGKIATEAIE
NFRTVVSLTREQKFEMMYAQSLQVPYRNALKKAQIFGITFAFTQAMMYFSYAACFRFGAY
LVAQQLMTFENVMLVFSAVVFGAMAAGNTSSFAPDYAKAKVSASHIIRIIEKVPEIDSYS
TEGLKPDRLDGNVKFNGVMFNYPTRPNIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQL
LERFYDPMAGSVFLDDKEVKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSH
EEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEA
TSALDTESEKCNCETGCSGSAGQSQGRPHLHCDRTPPVHHPERRLDCGDSEWQGQGAWHP
PAAAGPERHLFHNGSSWSKALMNCDHLRC
NT seq 3870 nt   +upstreamnt  +downstreamnt
atggggtttgaagaggaccttaatggaagcgcagacaagaacttctcaaagatgggcaaa
aagagtaaagaggagaagaaagaaaagaagcctgctgttggcgtatttgggatgtttcgc
tacgcggattggcttgacaagctgtgcatcgctttgggaactctcgctgctattatccat
ggaaccttacttcccctcttgatgctggtgtttggaaacatgacagatagtttttcaaag
gcagaaaacagtattctgccaagcataactaatcaaagtgaaatcaacggtacacagatc
gtcagcaacaacagtctggaggaagacatggccacgtacgcctactattactcagggatt
ggtgctggtgtgctcatagttgcttacatccaggtttcactttggtgcctggcagctgga
agacaaatacacaagatcaggcagaagttttttcatgctataatgaatcaggagataggc
tggtttgacgtgcatgacgttggggagctcaacacccggctcacagatgatgtctccaaa
attaatgacgggattggtgacaaaattggaatgttttttcagaacataacaacattttta
gctggttttataataggttttataagtggttggaagctaacccttgtaatcttggctgtc
agccctcttattggattgtcatcagctctatgggcaaaggtactgacttcatttaccaat
aaggaactccacgcctatgcaaaagctggagcagttgctgaagaggtcttagcagccatc
agaactgtgattgcatttggtggacaaaagaaggaacttgaaaggtacaataaaaattta
gaagaagctaaaaatattggaataaggaaaaccatcaccgccagcatttcgataggtatt
gcctacctgttggtctatgcagcatatgcactggcattctggtatgggaccaccttggtg
ctctcaaatgagtattctattggacaagtgcttactatcttcttctctattttattggga
acttttagtcttggacatttagccccaaacatagaagcctttgcaaacgcaagaggggca
gcctttgaaatcttcaagataattgataatgagccaagcattgacagcttctcaacaaag
ggatacaagccagacagtatactgggaaatttagagtttaaaaatgttcacttcaactac
ccatcaagaagtgaagttaagatcctgaagggccttaacctgaaggtgaagagtggacag
acggtggccctggtcggcaacagtggctgcggcaaaagcacaactgtgcagctgatgcag
aggctctacgaccccacagagggcgtggtcagcatcgacggacaggacatcaggaccatc
aatgtgaggtatctgcgggaaatcattggcgtggtgagtcaggaacctgtgctgtttgcc
accacgatcgcagaaaacattcgctatggccgagaagatgtcaccatggatgagatagag
aaagctgtcaaggaagccaatgcctatgacttcatcatgaaactgccccacaaatttgac
accctggttggtgagagaggggcacagctgagtgggggacagaaacagagaatcgctatt
gctcgcgcgctggtccgcaaccccaagatccttttgttggacgaggccacctcagccctg
gatacagaaagtgaagctgtggtccaggccgctctggataaggccagagaaggccggacc
accatagtgatagctcaccgcttgtctacagtccggaatgctgatgtcatcgctgggttt
gatggtggagtcatcgtggagcaaggaagccatgatgagctcatgagagagaagggcatt
tacttcaaacttgtcatgacacagactaaaggaaatgaagttgaatcaggaaataatgct
tatgaatcccaacgtgacactgatgcctctgaattgacttcagaagaatcaaagtctcct
ttaataaggagatcaattcgcagaagtatccacagaaaacaagaccaagagagaagactt
agtacaaaagaggccatggatgaagatgtgccccttgtttccttttggcggatcctaaag
ctaaatataagtgaatggccttattttgttgttggtgtactttgttctgttataaatggg
tgcttacaaccagtgtttgccatagtattttcaaggattgtaggggttttttcaagagat
gatgaccatgaaaccaaacaacggaattgtaacttgttttcgctgctctttctggtcatg
ggcatgatttcttttgttacatatttttttcagggcttcacatttggcaaagctggagag
atcctcaccaagcgactccgatacatggttttcaaatccatgctgagacaggatataagc
tggtttgatgatcataaaaacagtactggctcactgaccaccaggcttgccaatgacgct
tctcatgttaaaggggctatgggtgccaggcttggtgtagttacccagaacgtagcaaat
ctcgggacaggagttatcctgtccttagtgtatggctggcagctgacgcttttacttgca
gtaattataccgctcattgttttgggcggaatgattgaaatgaaactgttgtctggtcaa
gccttgaaggacaagaaagagctagagatctctgggaagattgctacagaagccattgaa
aacttccgcactgttgtctctttgactcgggagcagaagtttgaaatgatgtatgcccag
agcttgcaggtaccatacagaaatgctttgaagaaagcacaaatctttgggataacgttt
gccttcacccaggccatgatgtatttttcctatgctgcttgtttccggtttggtgcctac
ttggtggcacaacagctcatgacttttgaaaatgttatgctggtattttctgctgttgtc
tttggtgccatggcagctgggaataccagttcattcgctcctgactacgcgaaagccaaa
gtgtcagcatcccacatcatcaggatcattgagaaagtccctgagattgacagctacagc
acagagggcttgaagcctgatcggttagatggcaatgtgaaatttaatggagtcatgttc
aactatcccacccgacccaacatcccagtgcttcaggggctgagcctcgaggtgaagaag
ggccagacgctggccctggtgggcagcagtggctgcgggaagagcacagtggtccagctg
ctcgagcgcttctacgaccccatggctggatcagtgttcctagatgacaaagaagtaaag
caactgaatgtccagtggctccgagctcacctgggcattgtgtcccaggagcccatcctg
tttgactgcagcattgctgagaacatcgcctatggagacaacagccgggtcgtgtctcat
gaggagattgtgagggcggccaaggaggccaacatccaccagttcatcgactcgctgcct
gataaatacaacaccagagtaggagacaaaggaactcagctgtcgggtgggcagaagcag
cgcatcgccatcgcgcgcgccctcgtcagacagcctcacattttacttctggatgaagca
acatcagctctggatacagagagtgaaaagtgcaattgtgaaacaggttgttcaggaagc
gctggacaaagccagggaaggccgcacctgcattgtgatcgcacaccgcctgtccaccat
ccagaacgcagacttgattgtggtgattcagaatggcaaggtcaaggagcatggcaccca
ccagcagctgctggcccagaaaggcatctatttcacaatggttcaagctggagcaaagca
ctcatgaactgtgatcatctgaggtgctaa

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