Arvicanthis niloticus (African grass rat): 117722440
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Entry
117722440 CDS
T08817
Symbol
Trerf1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117722440 (Trerf1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
117722440 (Trerf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-C2H2_2
zf-met
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
117722440
NCBI-ProteinID:
XP_034377489
EnsemblRapid:
ENSANLG00005016662
LinkDB
All DBs
Position
17:55412010..55457176
Genome browser
AA seq
1236 aa
AA seq
DB search
MGDQQLYKTNHVAHSGENLFYQQPPLGVHSGLNHSYGNTISGAGMDAPQASPISPHFPQD
TRDGLGLPIGSKNLGQMDTSRQGGWGSHAGPGNHVQLRSNLANSNMMWGPPAQVEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGASDSA
LRQLLSQKPVEPSASAIASRYQQVPQQPHPGFTGGLPKPALPVGQHAPQGHLYYDYQQPL
AQMSMQGGQPLQASQVLSSHMQPLQQHQYYPQPTPQQQQAGLQRISMQEMQQQQQQQIRP
SPPQQQQQQQQQLQLQQRQSSLQIPQYYQPQPMMQHLQEQQQPPMHLQPPSYHRDPHQYT
PEQAHAVQLIQLGSMPQYYYQEPQQPYSHPLYQQSHLSQHQQREDSQLKTYSSDRQTPAM
LSSHGDMGPPDTGVADPASSEMTRVTSTLPHQPLLSPSGIHLNNMGSQHQQPSPSAMWPQ
MHLPDGRGQPGSPESSSQTKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRA
SPSLKQEEGEKAPPPQPQPQPQPQPPLPPPPPPPPQLPPEAERLTPMVMPVSVPVKLLPP
KPSSQGFANSVAATPSARDKPASSVSDDEMPVLVRMTLSPPHSPQGAAPCAPAEIPRKHP
PITAKVEEPLKTLPEKKKFRHRPEPLFIPPPPSSYTPNPTSYSGATLYQSQLRSPRILGD
HLLLDPAHELPPYTPPPMLSPVRQGSGLFSNVLISGHGPGVHPQLPLTPLTPTPRVLLCR
SSSIDGSNVTVTPGPGEQTVDVEPRINIGLRFQAEIPELQDVSALAQDTHKATLVWKPWP
ELENQALQQQVENLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMATLEMLLLQKPVRLK
CHPLANYHYAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIM
RLGRKHRTRLAEVIDDCMTSEEEEEAEEEEEDPEEDRKSIKEEESEVPKSPEPPPAPALA
PTEGPPMQAVGQQPSGSFICEMPNCGADCRCHVAPFLPQVFSSRQALNGHARIHGGTNQV
AKTRGAVPSGKQKPGGTQSGYCSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKSRNA
HMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPVGAPELLPLDQLSLMKPVKDVDILD
DDVVQRLGVMDEAEVVGTDLLLDDQDSVLLQGDTEL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaactgtacaagaccaatcacgtggcccacagtggtgagaacctattc
tatcaacagccaccccttggtgtccacagcgggctgaaccacagctatgggaatacaatc
tccggggctggaatggacgccccgcaggcctcacccatctctcctcacttccctcaagat
actcgggatggtctcggcttgccgattggctccaaaaaccttggccaaatggatacctcc
aggcagggaggatggggaagccatgcagggcctgggaaccacgtccagcttcgtagcaac
ttggccaactcaaacatgatgtgggggccaccggcccaggtggagcccactgatggctac
caatacacttattcccaggccagcgagatccggacccagaaactcaccagtggtgttttg
cacaagctggactctttcacccaggtgtttgccaaccagaacctgcggattcaggtcaac
aatatggcccaggtgctgcacacccagtcagcagtgatggatggagcctctgacagtgcc
ctccgtcagctgttatctcagaagcctgtggagccctcagcatcggctatagcttcccgc
taccagcaggtgccccagcagcctcaccctggtttcacaggtggactgcccaagccagcc
cttccagtcgggcagcacgctccccaaggacatctttattatgactaccagcagcccctg
gcccagatgtccatgcaaggaggacagccactgcaagcctctcaggtgctgtccagccat
atgcagccgttgcagcagcaccagtattacccacagccaacgcctcagcaacagcaagcc
ggactgcagaggatctccatgcaggagatgcagcagcagcagcagcagcagattcgcccc
tcaccgcctcagcagcagcagcagcagcagcagcagctccagctgcagcagcggcagagt
tcactgcagatacctcagtattatcagccccaacccatgatgcaacacttgcaagagcag
cagcagccacccatgcacctgcagcccccttcgtaccacagggaccctcatcagtatacc
ccggagcaggcacatgctgtccagctgatccagctgggctccatgcctcagtattactat
caggagcctcagcagccctatagccaccccctctaccagcagagccacctgtcccagcac
cagcagcgtgaagacagtcagttgaagacgtattctagtgacagacagaccccggctatg
ctgagttcccatggggacatgggacctcctgatacaggggtggcagatccagcaagctca
gaaatgacccgggtcactagtacccttcctcaccaaccgctcctgtcccccagtgggatc
cacctcaacaacatgggatctcagcatcaacagccatctcccagtgcaatgtggccccag
atgcacttacctgatggtagaggccagcctggatccccggaatcaagcagccaaaccaaa
ggagtgtttggggaacagtttgatgccaagaacaagctgacatgctccatctgcctgaag
gagttcaaaagcctgcctgccctgaacggccacatgcggtcccacgggggaatgagggcc
tcccccagcctcaagcaggaggaaggagagaaggccccaccacctcagcctcagcctcag
cctcaaccccagccgccactgccacctccgcctccgccgccaccgcagctccctcctgag
gcagagcgcctcacgcctatggtcatgcccgtgtctgtccctgtcaagcttctgccaccc
aagcccagctctcaggggttcgccaacagcgtcgctgccaccccttcggccagagacaag
ccagccagctcggtgtcggacgacgagatgcctgtgctcgtgaggatgaccctctccccc
cctcactctccccaaggggctgccccctgtgcgcctgctgaaatcccccggaaacatcca
cccatcaccgccaaagttgaggagcccctcaagaccctaccagagaagaagaagttccgg
caccggcctgagcccctcttcatcccaccaccgccttcttcctatacccccaaccccacc
tcttactcgggggccaccctgtaccagagccagctgcggtccccacgcatcctaggggac
cacctgctcctggaccccgcccacgaactgcccccctacacgccgccacccatgctgagc
cccgtgcgccagggctcaggactcttcagcaatgtcctcatctctggccacggccctgga
gtgcacccccagctgcccctcactcccctcacgcccacgccacgcgtgctgctgtgccgt
tccagcagcatcgacggcagtaatgtgacagtcaccccaggacctggagagcagactgtg
gatgttgaaccacgcatcaacattggattaagattccaagcagagatcccagaactgcaa
gacgtctccgccctggctcaggacacacacaaggccacactggtatggaagccgtggcct
gagctggaaaaccaggccctccagcaacaagtggagaatcttctgaatttgtgttgttcc
agtgctctgccaggtggagggaccaattcagaatttgctttgcactctctctttgaggcc
aaaggtgacgtgatggctaccctggaaatgctgctgctgcagaagccagtcaggttaaaa
tgtcatcctttagcaaattaccactacgccggttctgacaagtggacatccctagaaaga
aaactgtttaataaagcattggccacttacagcaaagactttatttttgtacagaagatg
gtgaagtccaagacggtggctcagtgcgtggaatactactacacctggaagaagatcatg
cggctggggcggaagcaccggacacgcctggcagaggtcattgacgactgcatgaccagc
gaagaggaagaagaggctgaggaggaagaagaggacccagaagaagataggaaatccata
aaggaagaggagagtgaagtgcccaagtcaccagagccaccacccgcccctgccctggct
cccactgagggaccacccatgcaggctgttggccagcaaccatcaggctccttcatttgt
gaaatgcccaactgtggggctgactgtagatgtcatgtcgctccctttcttcctcaggtg
ttcagctcccgacaggcactgaacggccacgcccgcatccatggcggcaccaaccaggtg
gctaagacccgaggtgctgtcccctctgggaagcagaagccaggtggcacccagagtggg
tactgctcagtgaagagttcaccatctcacagtaccaccagtggagagacagaccccacc
accatcttcccctgcaaggagtgtggcaaggtcttctttaagatcaaaagccggaatgcg
cacatgaaaacccaccggcagcaagaggagcagcagaggcagaaggctcagaaggcagcc
tttgcagcagaaatggcagccaccatcgagaggactacggggccggtgggggcacctgag
ctgctgcccctggaccaactgagtctgatgaaaccagtcaaggacgtggacattctggat
gatgatgtggtccagcggctaggcgtcatggacgaggccgaggtggtaggcacagatctt
ctcctggatgaccaagattcagttttgcttcagggtgatacagaactctaa
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