Arvicanthis niloticus (African grass rat): 117724195
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Entry
117724195 CDS
T08817
Name
(RefSeq) H-2 class I histocompatibility antigen, D-P alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04144
Endocytosis
anu04145
Phagosome
anu04218
Cellular senescence
anu04514
Cell adhesion molecules
anu04612
Antigen processing and presentation
anu04940
Type I diabetes mellitus
anu05163
Human cytomegalovirus infection
anu05165
Human papillomavirus infection
anu05166
Human T-cell leukemia virus 1 infection
anu05167
Kaposi sarcoma-associated herpesvirus infection
anu05168
Herpes simplex virus 1 infection
anu05169
Epstein-Barr virus infection
anu05170
Human immunodeficiency virus 1 infection
anu05203
Viral carcinogenesis
anu05320
Autoimmune thyroid disease
anu05330
Allograft rejection
anu05332
Graft-versus-host disease
anu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117724195
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117724195
04145 Phagosome
117724195
09143 Cell growth and death
04218 Cellular senescence
117724195
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
117724195
04612 Antigen processing and presentation
117724195
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117724195
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117724195
05170 Human immunodeficiency virus 1 infection
117724195
05168 Herpes simplex virus 1 infection
117724195
05163 Human cytomegalovirus infection
117724195
05167 Kaposi sarcoma-associated herpesvirus infection
117724195
05169 Epstein-Barr virus infection
117724195
05165 Human papillomavirus infection
117724195
09163 Immune disease
05320 Autoimmune thyroid disease
117724195
05330 Allograft rejection
117724195
05332 Graft-versus-host disease
117724195
09166 Cardiovascular disease
05416 Viral myocarditis
117724195
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
117724195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117724195
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
117724195
Exosome [BR:
anu04147
]
Exosomal proteins
Proteins found in most exosomes
117724195
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
Antigens
117724195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_I_C
Ig_3
ig
C2-set_2
Psg1
Ig_2
Apo-CIII
Motif
Other DBs
NCBI-GeneID:
117724195
NCBI-ProteinID:
XP_034379768
LinkDB
All DBs
Position
20:complement(50682383..50686175)
Genome browser
AA seq
372 aa
AA seq
DB search
MGATRPRALLLLLAAALAPTQTRAGSHSLRYFFTAVYRPGFGKPRYMEVGYVDDTEFVRF
DSDAENPSYEPRAPWVDQEGPEYWEQQTQIAKNTQQWFRDSLRTLLGYYNQSEGGSHSFQ
WMQGCDMGSDGSLLRGYEQYAYDGRDYIALNEDLKTWTAADMAAQITRRKCEQNGDAERQ
RAYLEGECVESLRTLLELGKETLLRTDPPKAHVTHHPRSEGDVTLRCWALGFYPADITLT
WQLNGEDLTQDMELVETRPSGDGTFQKWASVVVPLGKEQNYTCHVQHEGLPEPLTLRWEP
PPSTDSNMVIIAVLVVIGAVAIIGAVVAFVMKRRKNRGGKGGDYAPAPGYSQNSDMSLPD
CKVMVHDSHSLA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggggctacgaggccgcgcgcgctgctcctgctgctggcggccgccctggctccgacc
cagacccgtgcgggctcacactcgctacggtatttcttcaccgccgtgtaccggcccggc
ttcgggaagccccggtacatggaagtcggctacgtggacgacacggagttcgtgcgcttt
gacagcgacgcggagaatccgagttacgagccgcgcgcgccgtgggtagaccaggaaggg
ccggagtattgggagcagcagacacagatcgccaagaacacacagcagtggttccgagat
agcctgaggacgctgctcggctactacaatcagagcgagggcggctctcactccttccag
tggatgcaaggctgtgacatggggtcggatgggagcctcctccgcgggtatgagcagtac
gcctacgacggccgcgattacatcgccctgaatgaagacttgaaaacgtggacagcggcg
gacatggcggcgcagataacacgacgcaagtgcgagcagaatggtgatgcagagagacaa
agggcctacctggagggcgagtgcgtggagtcgctccgcacactcctggagctcgggaag
gagacgctgctgcgcacagatcccccaaaggcacatgtgacccatcatcccagatctgaa
ggtgatgtcaccctgaggtgctgggccctgggcttctaccctgctgacatcaccctgacc
tggcagttgaatggggaggacctgacccaggacatggagcttgtggagaccaggccttca
ggggatggaaccttccagaagtgggcatctgtggtggtgcctcttgggaaggagcagaat
tacacatgccatgtgcaacatgaggggctgcctgagccccttaccctgagatgggagcct
cctccatccactgactctaacatggtgatcattgctgttctggttgtcattggagctgtg
gccatcattggagctgtggtggcttttgtgatgaagaggagaaaaaacagaggtggaaaa
ggaggagactatgctccagctccaggttactcccagaactctgatatgtctctcccagat
tgtaaagtgatggttcatgactctcattctctagcatga
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