Arvicanthis niloticus (African grass rat): 117724204
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Entry
117724204 CDS
T08817
Name
(RefSeq) H-2 class I histocompatibility antigen, D-P alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04144
Endocytosis
anu04145
Phagosome
anu04218
Cellular senescence
anu04514
Cell adhesion molecules
anu04612
Antigen processing and presentation
anu04940
Type I diabetes mellitus
anu05163
Human cytomegalovirus infection
anu05165
Human papillomavirus infection
anu05166
Human T-cell leukemia virus 1 infection
anu05167
Kaposi sarcoma-associated herpesvirus infection
anu05168
Herpes simplex virus 1 infection
anu05169
Epstein-Barr virus infection
anu05170
Human immunodeficiency virus 1 infection
anu05203
Viral carcinogenesis
anu05320
Autoimmune thyroid disease
anu05330
Allograft rejection
anu05332
Graft-versus-host disease
anu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117724204
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117724204
04145 Phagosome
117724204
09143 Cell growth and death
04218 Cellular senescence
117724204
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
117724204
04612 Antigen processing and presentation
117724204
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117724204
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117724204
05170 Human immunodeficiency virus 1 infection
117724204
05168 Herpes simplex virus 1 infection
117724204
05163 Human cytomegalovirus infection
117724204
05167 Kaposi sarcoma-associated herpesvirus infection
117724204
05169 Epstein-Barr virus infection
117724204
05165 Human papillomavirus infection
117724204
09163 Immune disease
05320 Autoimmune thyroid disease
117724204
05330 Allograft rejection
117724204
05332 Graft-versus-host disease
117724204
09166 Cardiovascular disease
05416 Viral myocarditis
117724204
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
117724204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117724204
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
117724204
Exosome [BR:
anu04147
]
Exosomal proteins
Proteins found in most exosomes
117724204
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
Antigens
117724204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_I_C
ig
Ig_3
C2-set_2
Psg1
Ig_2
Motif
Other DBs
NCBI-GeneID:
117724204
NCBI-ProteinID:
XP_034379783
EnsemblRapid:
ENSANLG00005026334
LinkDB
All DBs
Position
20:complement(51099264..51102918)
Genome browser
AA seq
380 aa
AA seq
DB search
MGAMAPLMLLLLLVATLAPTQTRARSHSLRYFYTAMSRPGLGEPRFIAVGYVDDTQFVRF
DSDAENPRMEPRAPWVEQEGPEYWERETQNCKNTEQTFRVSLRNIRGYYNQNEGGSHTLQ
RMYGCDMGSDGSLLRGYMQEAYDGHDYITLNKDLKTWTAADMAAQNTRRKWELAGDAEKR
RAYLEGDCMEWLRRYLELGKETLLCTDPPKAHVNHHLRSEGEVTLRCWAMAFYPADITLT
WQLNGEDLTQDMELVETRPSGDGTFQKWASVVVPLGKEQNYTCHVQHEGLPEPLILRWEP
PPSTPPSSNMAVIAVLVFLGAMAIIGAVVAFVMKRKHRSIAFLLTGRQGGDYTPAPGNSQ
SSDMSLPDCKVMVHDSHSLA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaatggcgcccctcatgctgctcctgctgctggtggccaccctggccccaacc
cagacccgcgcgcgctcacactcgctgcggtatttctacaccgccatgtcccggcccggc
ctcggggagccccggttcatcgctgtcggctacgtggatgacacgcagttcgtgcgcttc
gacagcgacgcggagaatccgaggatggagccgcgcgcaccgtgggtggagcaggagggg
ccggagtattgggagcgggagacacagaactgtaaaaacacggagcagactttcagagtg
agcctgaggaacatccgtggctactacaaccagaacgagggcggctctcacacgctccaa
aggatgtatggctgtgacatggggtcggacgggagccttctccgcgggtacatgcaggaa
gcctatgatggccacgactacatcaccctgaacaaagacctgaaaacctggacggcggcg
gacatggcagcacagaacactcgacgcaagtgggagctcgctggtgatgcagagaaacgc
agggcctacctggagggcgactgcatggagtggctccgcagatacctggagcttggcaag
gagacactgctgtgcacagatcccccaaaggcacatgtgaaccatcatctcagatctgaa
ggtgaagtcaccctgaggtgctgggctatggccttctaccctgctgacatcaccctgacc
tggcagttgaatggggaggacctgacccaggacatggagcttgtggagaccaggccttca
ggggatggaaccttccagaagtgggcatctgtggtggtgcctcttgggaaggagcagaat
tacacatgccatgtgcaacatgagggtctgcctgagccactcatcctaagatgggagcct
cctccatccactcctccatcctccaacatggcggtcattgctgttcttgttttccttgga
gccatggccatcattggagctgtggtggcttttgtgatgaagaggaaacacaggtccata
gcttttcttctcacaggtagacaaggaggggactacactccagctccaggtaactcccag
agctctgatatgtctctcccagattgtaaagtgatggttcatgactctcattctctagca
tga
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