Acholeplasma oculi: Aocu_04520
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Entry
Aocu_04520 CDS
T03695
Symbol
uvrB
Name
(GenBank) Excinuclease UvrABC system, subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aoc
Acholeplasma oculi
Pathway
aoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aocu_04520 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoc03400
]
Aocu_04520 (uvrB)
DNA repair and recombination proteins [BR:
aoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aocu_04520 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Aocu_04520 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_7
Kinesin
P-loop_SecA
AAA_22
UB2H
AAA_5
HerA_C
AAA_19
DUF1844
Motif
Other DBs
NCBI-ProteinID:
CDR30525
UniProt:
A0A061A9F4
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All DBs
Position
1:520492..522447
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AA seq
651 aa
AA seq
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MFKLKSPYQPKGDQINAIKELKENFLNGKKEQILLGATGTGKTFTMANMIESLGKKTLVL
AHNKTLAGQLYGELKSFFPENRVEYFISYYDYYQPEAYVVTSDTYIEKDASINDEIDELR
HSAVASLLTRDDVIVVASVSCIYGIGDPEDYQKATIFLRVGETYSRNSFLNKLVELQYER
NDMDFKRGTFRVRGDNVEVIPSNERSNGIRVSFFGDEIDDIIIFDTLTGVSKERQSFISI
FPATLFMANKDKMKESIRRIKNELQEQIHYFQSKNLLLEAQRIEMRTKYDIEMLEEIGFT
SGIENYSRHIALREAGETPATLIDFFGDDYLLIIDESHVTVPQIRGMYFGDRSRKENLVN
YGFRLPSALDNRPLKFEEFEERKDKVIYLSATPGPYELDKNLPIIEQIIRPTYLLDPEIE
IKPSMGQIDDLYFEIKKRIEANERVLVTTLTIKMSEDLTRHFKELGLKVAYLHSEVKSLE
RTSILRALRMGKYDVLVGINLLREGLDLPEVSLVAILDADKQGFLRSERSLIQTIGRAAR
NLHGKVIMYADSISESMQKAIDETYRRRKIQQTFNEVNQVEPYQVIKDIREDISLKGEIT
DKDSIQLKYDKKQIEKEIKKLELLMRQAAKDLDFEKAMEIRDLIFELKAGN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaaattaaaatccccctaccaacccaaaggtgaccaaataaatgccattaaagaa
ttaaaagaaaacttcttaaatggcaaaaaagaacagattctacttggtgcaacaggtact
ggtaaaacctttaccatggccaatatgatagagtcactcggtaaaaagaccttagtactc
gcacataataaaacactagcaggtcaattatatggtgagttaaaatctttctttcctgaa
aatagagtggaatactttatttcttactatgattactatcaaccagaagcatatgttgta
actagtgatacttatattgaaaaagatgcctctatcaatgatgaaattgatgaattaaga
catagtgcagtagcatctttactaacaagagatgatgtcattgttgtggcatctgtttct
tgtatatatggaattggggatccagaggattaccaaaaagcaaccatcttcttaagagta
ggtgaaacctattctagaaattcatttttaaataaattagtagaacttcaatatgaacgt
aatgatatggatttcaaaagaggaacgtttagagttcgaggcgataatgttgaagttatt
ccttcaaatgaacgaagtaatggtattagagtttcattctttggtgatgaaattgatgat
attatcatctttgatacactaacaggtgtatctaaagaacgacaaagttttatatctatt
tttcctgcaacactctttatggcgaataaagataaaatgaaggaaagtattagaagaatt
aaaaatgaacttcaagaacaaattcattatttccaatctaaaaatttattactagaagca
cagcgtatcgaaatgcgtacgaaatacgatatagaaatgcttgaggaaattggttttacc
tcagggattgaaaactactctagacacatcgcattaagagaagcaggagaaacaccagca
accttaattgacttttttggagatgattatctactcatcatcgatgagtcacatgtgact
gttccacaaattagaggaatgtactttggtgaccgttctagaaaagaaaacttagtcaat
tacggttttagattaccaagtgctttagataatagacctttaaaatttgaagaatttgaa
gaaagaaaagataaagtcatttatttatctgcaacacccggtccttatgaactagacaaa
aatctaccaatcattgaacaaattattagaccaacatatttactggacccagaaattgag
ataaaacctagtatgggccagattgacgatctatattttgaaatcaagaagcgcattgaa
gccaatgaaagagtcttagttacaaccctaaccataaagatgagtgaggatttaactaga
cactttaaagaattaggattaaaagtagcgtaccttcacagtgaggttaaatccttagaa
agaacctcaatcttaagagctctaagaatgggtaaatatgatgttttagtagggattaac
ttacttagagaagggcttgatttaccggaagtttctttagttgccatactcgatgcggat
aaacaaggattcttgcgtagtgaaaggtctttaattcaaaccattggtcgtgctgctaga
aatttacatggtaaagttattatgtatgcagattctatttctgaatccatgcaaaaagca
atcgatgaaacgtatagaagaagaaagattcaacaaacatttaatgaagtgaatcaagta
gaaccatatcaagtcattaaagacataagagaagatatttcacttaaaggtgaaattaca
gataaagattcaattcaattaaagtatgataaaaaacaaatagaaaaagaaattaagaaa
ttagaacttctaatgagacaagctgctaaagatttagattttgaaaaagcgatggaaatt
agagatttaatattcgaactgaaagcgggtaattaa
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