Amphiprion ocellaris (clown anemonefish): 111562936
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Entry
111562936 CDS
T06018
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111562936 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111562936 (thoc6)
03041 Spliceosome [BR:
aoce03041
]
111562936 (thoc6)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111562936 (thoc6)
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111562936 (thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
111562936
NCBI-ProteinID:
XP_023117516
Ensembl:
ENSAOCG00000018704
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSAALSPDATAANQKPVLTFTAHE
GPVFSLLSTDVHLLSAGNGEISAWSWNELTKKNVKPLWTKRPNYKSSLEIPEINSMIINP
RDNSLVVGGGDNNIHIMDLEHGVFKNVLQGHSDYIHCVSVRDREAEILSGGEDGAVRMWD
SRSSQCVHCIEVYKYESCARPQFGKWISCLTTDSDWMLCGGGPSLSLWHLRSLSPTSIFP
LSGCQRQAAFYQDKILAVGEGAFVSHCLLGGEVKAQIPCTPQSLNTLQLNTNSTEHRVLT
VGGSSDHIDVFTNLSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctgtagagctcctccacatgtccgtcttctctcagagcttctctccctgcgga
cgattcctggcagccggaaacaactatggagagatcgcagtgttcagtctctctgcagct
ctgagtccagatgccacagcagccaatcagaagccagttctgaccttcacagcccatgaa
ggtccagtcttctccctgctgtccactgatgttcacctcctcagtgcaggtaacggagag
atcagcgcctggagctggaatgaactcaccaagaagaacgtcaaacctctgtggaccaag
agaccaaactacaagtccagtctggagatcccagagatcaactccatgatcatcaacccc
agagacaacagtctggtggtgggaggaggagacaacaacatccacatcatggacctggaa
catggagtcttcaagaacgtccttcagggccactcagactacatccactgtgtgagcgtc
agagacagagaagctgagatcctgtcaggaggagaagatggagcagtgaggatgtgggac
agcaggtccagtcagtgcgttcactgcattgaagtctataaatatgagagctgcgctcgg
cctcagttcggtaaatggatcagctgtctgaccaccgactctgactggatgttgtgtggt
ggaggtccgtctctgtctctgtggcatcttcgctcgctgtctcctacctccatcttcccc
ctgagtggctgccagcgacaggcggccttctaccaggacaagatcctggcggtgggtgaa
ggtgcgttcgtgtcccactgtctgctgggcggggaggtgaaagctcagattccctgcact
cctcagagcctcaacacactgcagctgaacaccaacagcactgagcaccgggtgctgacg
gtgggaggaagcagtgaccacattgacgtcttcaccaacctctcttacagagccttctcc
ctcagcttctga
DBGET
integrated database retrieval system
