Amphiprion ocellaris (clown anemonefish): 111575942
Help
Entry
111575942 CDS
T06018
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111575942 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111575942 (ddx46)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111575942 (ddx46)
Spliceosome [BR:
aoce03041
]
Complex A
U2 snRNP components
U2 related factors
111575942 (ddx46)
Complex B
111575942 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
111575942
NCBI-ProteinID:
XP_023137151
Ensembl:
ENSAOCG00000007758
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDKRSKKDDRDRSRRGERSRSRDRRRSRSRDRKR
ARRSRSRDRRRSRSRDRRRSGSRSRARRSRSGSPSKARKTDEKSRSKEKDTIDPLSDKKK
AKEEKEDEKVEDQQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQG
KKWSLEDDDDDDEDGSAVMEGDDDEDGDGKGDRKDKDIKEEKKEEGEQKETPMEQQTEED
DVDPLDAYMEEVKQEVKKFNMGGVKGNDKKGAMTVTKVVTVVKTKKGPHTHKKKGELMEN
DQDAMEYSSEEEEVDLQTALTGFQTKQRKILEPVDHGKIQYESYRKNFYVEVPELAKMTT
DELNAYRLELEGITVKGKGCPKPIKTWVQCGVSMKILNALKKHSYEKPTPIQAQAIPAIM
SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKK
FSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVV
LDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS
VVCSDVEQHVLVIDEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCM
SLHGGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRA
GRTGRAGNKGYAYTFITEDQVRYAGDIIKALELSGSPVPPELEQLWGSFKDQQKAEGKII
KSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKRV
KDLSAPGAAAGAPGTVTATTAAPGGLPGLGPTSAGNIQKLEMAKRLALKINAQKNLGAEA
QDVMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQAETV
KRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLA
IESANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcgagtccagacattacaggaagcgttccgcgtctcggggccggtcaggtagc
cgatctaagagtcgctctccggacaaacgctccaagaaagacgaccgagaccggagccgg
agaggagagagatcccggagcagagaccgccgcaggtcccgctccagagacagaaaacga
gccaggcgctccaggagcagagacaggaggaggtccagaagccgagacagaaggaggtca
ggcagccggagccgagcccggaggtcccgatctggcagccccagcaaggccaggaaaaca
gatgaaaagtcgaggagcaaagagaaagacaccatcgatcccttatctgacaagaaaaag
gctaaagaggagaaagaagatgagaaggttgaggatcaacaagactttgaccagaacaag
ctggaggaagagatgaggaagaggaaggagcgtgtggagaagtggagggaagagcagagg
aagaaggcaatcgaaaacatcggagagatcaagaaagaactagaggagatgaaacagggc
aagaaatggagcctggaggatgatgatgatgacgatgaggatggttcagctgtgatggag
ggagacgatgatgaagacggagatgggaagggggacagaaaagacaaggacatcaaggag
gagaagaaggaggagggtgagcagaaggagactccaatggagcagcagactgaggaggac
gacgtggatcctctggacgcttacatggaggaggtcaagcaggaggtgaaaaagttcaac
atgggaggcgtgaaaggaaacgataagaaaggagcgatgacggtaaccaaagtggtgaca
gttgtaaaaaccaaaaaagggcctcacacgcacaagaagaagggtgagctgatggagaat
gaccaggatgccatggagtactcttcagaggaggaggaggtggatctgcagacagctctg
acaggcttccagaccaaacagaggaagatcctggagcctgttgaccacgggaagatccag
tatgaatcctaccgcaagaacttctacgtggaggtgcccgagctggccaagatgactaca
gatgagctgaatgcataccggctggagctggagggtattacagtcaaagggaaaggctgt
cccaaacccattaagacctgggtccagtgtggagtgtcgatgaagatcctcaacgccctg
aagaagcacagctatgagaagcccacacccattcaggctcaggccatccctgcaatcatg
tcaggcagagacctcattggcattgctaagaccggcagcggaaaaaccatcgctttcctg
ctgcccatgttccgacacatcatggaccagcggcctctggaggagtctgagggacccatc
tctgtgatcatgactccgaccagagagttggctctgcagatcacaaaggagtgcaagaag
ttctccaaaccactgggtctcagagtggtgtgtgtctatggaggcacaggtatcagcgaa
cagattgctgagctgaagagaggagctgagatcatcgtgtgcaccccgggaagaatgatc
gacatgttgggggccaacagtggtcgggtaaccaacctgcgcagagttacgtatgtggtg
ctggacgaagcagacaggatgtttgacatgggcttcgagccacaggtgatgcgtattgtg
gacaatgtgcgtcccgaccgtcagaccgtcatgttctcagccaccttccccagagctatg
gaggcgttggcccgcaggatcctgtccaagcccattgaggtccaggtgggaggccgcagt
gtcgtctgctcggatgtggagcaacacgtgcttgtgatcgatgaggacaagaagttccta
aaactgctggagatcctgggtcactatcaggagaagggctctgtcattatctttgtggac
aaacaggagcacgcagacggactgttgaaagacctgatgaaggcctcgtacccctgcatg
tctttacatggaggaattgaccagtacgacagagacagcatcatcaacgattttaagaat
ggagcatgtcgtctgatggtggccacctcagtggcagccagaggcctggacgtcaagcag
ctgatcctggtggtcaactacagctgtcccaaccactacgaggattacgtccacagggcc
ggacgcacaggcagagccggcaacaagggctacgcctacaccttcatcacagaggatcag
gttcgctacgctggtgatatcatcaaggccttggagctgtcaggctctcctgtcccccca
gaactggagcagctctggggctccttcaaagaccagcagaaagcggagggtaagatcatt
aaaagcagcagtggcttctctggaaagggattcaagtttgatgagactgaacatgctctg
gccaatgagaggaagaagctacagaaagctgcactcggattgcaggattctgatgatgag
gacggagctctggatattgaggaacaaatcgaaagcatgttcaactctaagaagagggtg
aaggatctgtctgctcccggggcggctgccggtgcaccaggaactgttactgctacgaca
gctgctcccggaggactgcccggcctcggaccaacatctgctggaaatatccagaaactg
gagatggctaaaaggctggcgctcaagatcaacgctcagaagaacctgggcgccgaagct
caggatgtgatgcagcaggccactaacgccatcctgcggggcggcaccatcatgaccccc
tctgtgtctgcaaagaccatcgctgaacagctggcggagaagatcaatgccaaactcaac
tacacccctgtagagaagctggaggaggagcggcaggcagctgagcaggccgagactgtc
aagagatacgaagaggagctggagatcaacgacttccctcagacggccaggtggaaggtg
acgtctaaagaagctctgcagaggatcggtgaatactctgaggccgccatcaccatcaga
ggaacctatttccctccaggcaaagagcccaaggagggagaacgcaaaatctatctggct
attgagagtgcgaatgaactggcagtgcagaaagccaaaacagagattacacggctaatc
aaggaagagctcatcagattacaaaactcctaccagccgacgagcaagggccgctacaaa
gtgttgtag
DBGET
integrated database retrieval system
