Amphiprion ocellaris (clown anemonefish): 111581543
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Entry
111581543 CDS
T06018
Name
(RefSeq) putative ATP-dependent RNA helicase an3
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
111581543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111581543
03041 Spliceosome [BR:
aoce03041
]
111581543
03036 Chromosome and associated proteins [BR:
aoce03036
]
111581543
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111581543
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111581543
mRNA cycle factors
Common to processing body (P body) and stress granule
111581543
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111581543
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111581543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_30
DEAD
Glyco_hydro_30C
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111581543
NCBI-ProteinID:
XP_023145527
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MSHVAVENAHGLEQQLAVLDLSAADGQGGGTNRRYIPPHLRNKDVSKNGNAFAAGRQGGY
TIAPATNYGWDGGRNNFVNGYHDNRMTGNTFNRGPPRMERGRGGVGGGGYRGNRGGSFNP
INPAQPMSFDAGGWNTAKDAYSSFGNNRGKSAFFNDRGNANRGRFEHGGFGGGGGGGNSR
WVEESRDDGDWSKPTPRNERLEHELFSGSNTGINFEKYDDIPVEATGQNCPHHIESFQDV
DMGEIVMGNIALSRYTRPTPVQKYAIPIVKSKRDLMACAQTGSGKTAAFLLPILSQIYAD
GPGEALNAAKASGQENGKFGRRKQYPISLVLAPTRELALQIYDEARKFSYRSRVRPCVVY
GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQI
RRIVEQDTMPHKGIRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVW
VEESDKRSFLLDLLSATVIPSEVQDSTGDNIEKPGKDSLTLVFVETKKGADALEDFLYRE
GYACTSIHGDRSQRDREEALNQFRSGKCPILVATAVSTHKILIPLLQRAQALSSGRLSLL
ASAWSAPAWMKTNGALTGKGSLKGQPGGKEHKAWARYYVRFLEEYSKHNLSFWAVTTGNE
PSAGQMTNYSFQALGFTAEEQRDWVSLDLGPALHASSFPRTHVLILDDNRLLLPHWAKVV
LSDIHAGRYIHGVAVHWYLDGVVPADISLGVTHSLYPEYYLFATEACAGWRPLDRGVKLG
SWDRAEQYAHDIIQDLNHHVVGWTDWNLALDQTGGPNWVKNFVDSPVIVDSKRDVFYKQP
TFYSMAHFSKFLLEGSQRVGVSASTETDLEFTAFIRTDGSVVLIILNRSLSEIQFEVWDP
AVGFLPSTAPPHSLLTLAWNTH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgaaaatgcccacggtctagagcagcagctcgctgtcctagac
ttgagcgctgcagacggacaaggtggaggcaccaacaggcgatatattcctccacactta
cggaacaaagacgtttccaaaaatggaaatgccttcgctgctggacgacagggcggctac
accatcgctcctgcaaccaactacggttgggacgggggacgcaacaacttcgtcaacggc
taccacgacaatcgcatgaccggcaacaccttcaaccgcgggccgcctcgcatggagcgc
ggccggggcggcgtcggaggaggcggttaccggggcaacagggggggctccttcaacccc
atcaacccagcgcagccaatgagctttgacgcaggtggctggaacaccgccaaggacgcc
tatagcagcttcggcaataaccgagggaagtcggcgttcttcaacgacagaggaaacgct
aacagagggaggttcgagcatggtggatttggtggcggaggaggaggaggaaacagccgc
tgggtggaagagtcccgagatgacggagactggtccaaaccgacgccacgcaacgaacgc
cttgaacatgagttgttctccggcagtaacactggcattaactttgagaaatacgacgac
attcctgttgaggctacaggacagaactgtcctcaccacatcgagagtttccaggacgtg
gatatgggtgagatcgtcatggggaacatcgctttgagccgctacaccagaccaactcct
gtccagaaatatgccattcctatcgtcaagtccaagagagacctcatggcctgtgcacag
acaggttctgggaagacggcggcgttcctgctgccaatcctcagccagatctacgctgat
ggaccaggagaagctctgaacgcagctaaagcctctgggcaggagaacggaaagttcggc
cgtcgcaagcagtaccccatctctctggtcctggctccgaccagagaactggccctgcag
atctatgacgaagccaggaagttttcctaccgctccagagtgcgtccctgcgtagtttac
ggaggagcagacatcggccagcagatcagagacctggagagaggctgccatctgctggtg
gccacacctggaagactggtggacatgatggagagaggcaagataggactggactactgc
aactacctggtcctggatgaggcggatcgaatgctggacatgggctttgagccgcagata
cgacgcatcgttgagcaggacaccatgccgcataaaggcatccggcagaccatgatgttc
agcgccacctttcctaaagagatccagatcctagcgagggatttcctggaggagtacatc
ttcctggccgtgggcagagtgggttccacctcggagaacatcactcagaaagtggtgtgg
gtggaggagagcgataagaggtctttcctgctggacctgctcagcgctacggtcatcccc
agcgaggtacaggacagtactggagacaacatagagaaacccggcaaggactcgttgact
ctggtttttgtggagaccaaaaaaggcgccgacgccttggaggacttcctgtaccgggag
ggctacgcctgcaccagtatccatggcgaccgttcccagagagaccgagaggaggccctg
aaccagttcagatcaggaaaatgccccattctggtggcgacggcggtcagtacacataaa
atcctgattcctctcctgcagagagcccaggctttatcttctggtcgtctgtcgctgctg
gccagtgcctggagcgcccccgcctggatgaagaccaacggtgccctgacaggaaaaggt
tctctgaaggggcagccggggggcaaagagcacaaagcttgggctcggtactacgtcagg
ttcctggaggaatattccaaacacaacctgagcttctgggccgtgacgacaggaaacgag
ccctctgctggacagatgaccaactacagtttccaggctctgggcttcaccgctgaggag
cagagggactgggtgtctctggatctgggcccggctctccacgcctcgtccttccccaga
acccacgtcctgatcctggatgacaaccgcctgctgctgccccactgggccaaagtggtc
ctgagtgacatccatgcgggtcgctacatccacggtgttgcggtccactggtacctggac
ggtgtggttccggccgacatcagtctgggcgtcacccacagcctttatccagaatattac
ctgttcgctaccgaggcctgcgctggctggaggcctctggaccgaggggtgaagctgggg
agctgggaccgagctgaacagtacgctcacgacatcatccaggacctgaaccatcacgtg
gtgggctggactgactggaacttggccctggaccagaccggcggaccaaactgggtgaag
aacttcgtggacagtccggttatagtggattcaaagagagacgtcttctacaaacagccc
accttctacagcatggcccacttcagtaagttcctgttggaaggatctcagagagtcgga
gtgtcggccagcacagaaacagacctggagttcacagcgttcatcaggacagacggatca
gtggttctcatcattctcaacaggtctctgtcagagatccagtttgaggtctgggatcct
gctgtgggtttcctcccctccactgctccgcctcattctctgctcacgctggcttggaac
acacactaa
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