KEGG   Asparagus officinalis (garden asparagus): 109819465
Entry
109819465         CDS       T05243                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109819465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aof03036]
    109819465
   03400 DNA repair and recombination proteins [BR:aof03400]
    109819465
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    109819465
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     109819465
SSDB
Motif
Pfam: HhH-GPD DUF6591 NPR3 RNA_polI_A34 RR_TM4-6
Other DBs
NCBI-GeneID: 109819465
NCBI-ProteinID: XP_020240795
LinkDB
Position
8:complement(96281998..96306602)
AA seq 331 aa
MTTTTTTTRKSCIAKCESVKEKGGGGIRCTGGAKEEAAAATTTNNNSQSSPNPAPKPTTN
QDLLAMLDSFRYTGGGGGITSTRAEGTSSKPSPNPNPCTPKTIKRKSPPSGVGVIVDGPD
EEKGKKKRKSKEAKLKEEEEVVATNNRKRKKTEMNEKEEEEDKERKKRSRPRSAMTAKEK
YMDCYKRVETGNTWEPPVSPYGLLQECHYTDPWRVLIICMLLNITSGVQVNRVLDEIFAL
CPNAEAATNVRQEDLASLIKPLGLSDLRSKRMMKLSRQYLENDWTHVTQLHGVGKYAADA
YAIFCVGKPDQVVPEDHKLVDYWKFVCKMRN
NT seq 996 nt   +upstreamnt  +downstreamnt
atgacgacgacgacgacgacgacgagaaaaagttgcatcgccaaatgcgaatccgtcaag
gagaagggaggagggggaataagatgtacgggaggggcgaaggaggaagccgccgccgcc
accaccaccaacaacaacagccagtcctctccaaaccccgcccctaaacctaccacgaac
caggacttgctcgctatgttagactcctttagatacacgggaggaggaggaggaattaca
tccacgcgagcagagggcaccagcagcaagccttctccgaaccctaatccttgcaccccg
aagacgattaagaggaaatctcctccctcgggtgttggcgtgatcgtagatggtccggat
gaggagaaggggaagaagaagaggaagagtaaggaggcaaagctaaaagaagaagaggag
gttgttgctactaataaccgaaagaggaagaagacagagatgaatgagaaagaagaagag
gaagataaggagaggaagaagaggagtaggccacgaagcgctatgactgctaaggagaaa
tatatggactgctacaagagagtcgagactgggaatacctgggagcctcccgtttctccc
tatggtttacttcaagaatgtcactacaccgatccttggagggtgcttataatttgcatg
cttcttaacatcacatcaggagttcaggttaacagggttctagatgagattttcgctcta
tgccctaatgcggaagctgcaaccaatgttcgtcaggaggatctagcatcattgataaag
cctttgggtttgtcggacctaaggagtaaacgtatgatgaagctctctcgtcagtatttg
gagaatgattggactcatgtgactcagctccatggtgttggcaagtatgcagcagatgca
tacgcgatattctgtgtaggaaagcctgatcaagttgtaccagaggaccacaagttggtc
gattattggaaatttgtctgcaaaatgcgtaactga

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