Asparagus officinalis (garden asparagus): 109829556
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Entry
109829556 CDS
T05243
Name
(RefSeq) lisH domain and HEAT repeat-containing protein KIAA1468 homolog
KO
K26154
RAB11-binding protein RELCH
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109829556
Membrane trafficking [BR:
aof04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109829556
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Gene cluster
GFIT
Motif
Pfam:
HEAT
ATG14
ARMC9_LisH
IZUMO
UPF0242
Motif
Other DBs
NCBI-GeneID:
109829556
NCBI-ProteinID:
XP_020252243
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All DBs
Position
1:complement(124752545..124773710)
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AA seq
1186 aa
AA seq
DB search
MDVERSSLCNCVVNFLLQEKYHLTAFELLHELLEDGRHDQAIRLREFFSDPNLFPSDQIS
RFNSLRVADPQILLEEKETVEENLAISEYELRLAQEDLSRLKEELQKQKESLPDGENGSH
LNVNAADGPASEEDKRGSSLSSLGPLKDAERKDINCAVKEYLLFAGYRLTAMTFIEEVTD
QDLGVWPKSSACVSDALRRYYYQYLSATTEAAEEKMSILRENESLAKENERLNYEKDTLL
RNKELVDGQIVVLTKTLETAQKDLKDREILLQSLRKTLEHQRKELNDCRAEITSLKMHIE
GSRASRNRATGENENVQLLEVNNYVDDLKSTHNDTEKMEGADITSTASQSGTNSNEDSLP
GEKVVQMNEEIVLPNSVDSMSGLYVGNAESQPLDQDGRKNINTTSDQLINSCNGDVDSKE
NAHDHLFKPLSEDVGLTYKEDSPKRGTTGALESIQILSDALPKIVPYVLINHREELLPLI
MCAIERHPDSTVRDSLTHTLFNLIKRPDEQQRRIIMDACVTLAKNVGEMRTETELLPQCW
EQINHTYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDAATVVREAAAHNLALL
LQLFPNRDKYFKVEELMFQLVCDPSGLVVETTLKELVPAVITWGGKLDHILRVVLSHILG
SAQRCPPLSGVEGSVDSHLRVLGERERWNIDVLLRMLMELLPFVHQKAIASCPFTTTMES
LSASQQANSFFSTSVLQLYAGGHMEWPQFDWMYVDCFPDLIQLSCMLPQKEDNLRTRITK
FLLDVNILFGDDYVEHIMLPVFLVAIGDCDSADLTFFPPSIHSRIKGLRPKTATAERLAI
MCVLPLLLSGILGARSSNEQLSEYLRKLLVNNTISDDSWSGYRVAEVIDAVRFLCTFEKH
HGVIFNVLWDMVVSSNADMKIEAANLLKVLVPYVDAKVASTQVLPALVTLGSDQNLDVKY
ASINTFGAVAQYFKDDMIVEKIRIQMDAFLEDGSLEATISVIRALVVAVPHTTERLREYL
LSKIFQLTALPSHGKDVVRRREKANVFCEAVRALDATDLPLTSVRDLLIPAITNLLKDPD
SLDPAHKEALEIIMKERSAGAFESISKVMGAHLGIATSVTSFFGEGGLRGKKDIADPQET
IISSPPQPSPSATQDGTRFQRMMRGGLGEMLRGKGKGPEDSPGKPA
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagagatcctctctctgcaactgcgtcgtcaacttcctgctccaggagaag
taccacctcaccgccttcgagctcctccacgagcttctagaagacggccgccatgatcag
gccatccgcctccgcgagttcttctccgatcccaacctgtttccctccgatcagatctct
agattcaattcccttcgagttgcagaccctcagattttgcttgaagagaaagaaacagta
gaagaaaatttggcaatcagtgaatatgaacttcgtttagcgcaagaagacctctcaagg
ctgaaggaagagttacaaaagcaaaaggaatctcttccagatggcgagaatggatctcat
ctaaatgttaatgctgccgatggtcctgcaagtgaagaggataagagggggagctcactt
tcatctttaggtcctcttaaggatgctgaacgtaaagacatcaattgtgctgtcaaggag
tacttgctttttgctggttaccgacttacagccatgacctttattgaggaggttacagac
caagatcttggtgtttggccaaaaagttcagcttgtgtatctgatgctttgcgccgttac
tattatcaatatctttcagccaccacagaagctgctgaggagaagatgtccattcttagg
gaaaatgagtccctagctaaagaaaatgagcggcttaattatgaaaaagataccttactt
aggaataaggaattggtcgatggtcagattgttgttttaacaaagaccctggaaactgca
caaaaggatctaaaagacagagagattctgctgcaaagtttgagaaaaacactagagcat
cagaggaaggaactaaatgattgcagagctgaaatcacttcacttaagatgcacattgaa
gggtccagggctagtcggaatcgggctacaggagaaaatgaaaatgtacaattacttgaa
gtcaataactacgtggatgatctaaaatctactcataatgacacagaaaaaatggaggga
gcagacatcacttccacagcttcacagtctggtacaaactcgaacgaagattcgctgcct
ggggagaaggttgttcagatgaatgaagaaatagtattacctaattctgttgattcaatg
tctggtttgtatgttgggaatgcagaaagtcaaccccttgatcaagatggtagaaagaac
attaatactacttcagaccagttaataaattcttgtaatggtgatgttgacagcaaagag
aatgctcatgaccacctctttaaaccactatctgaagacgttggattaacatataaagaa
gatagtcccaaacgaggaacaactggggctttggagtccatccagatactttcagatgca
ttgcctaagattgttccctatgttctaatcaaccatcgtgaggagcttcttcctttaatc
atgtgtgctattgagcgccatccggacagtactgtcagagattcgttaactcacacattg
tttaatcttattaaacgcccagatgaacagcagaggcgcattataatggatgcctgtgta
acccttgctaagaatgtgggagaaatgaggacagaaactgaattgcttccccagtgctgg
gaacagattaatcacacatacgaggaaaggaggctactagttgcccagtcttgtggagaa
cttgcagaatttgttcggcctgaaatccgtgactctctcattttatccattgtccagcaa
ctaattgaagatgctgccacagtcgtgagagaggctgcagctcataacctggcattgctt
cttcagctcttcccaaatagggacaaatattttaaggttgaggagttgatgtttcagttg
gtctgcgatccctcagggttagtagttgagacaaccctaaaagaacttgttcctgcagta
ataacttggggaggcaaattggatcatattctacgtgttgtactatcccacatcttgggt
tctgctcagcggtgtccgcctctatcaggggttgaaggttctgtagattcacaccttcgt
gttttaggtgaaagagagcgctggaatattgatgtgctattacgtatgttgatggagtta
cttccatttgttcatcagaaagctattgcaagctgcccttttaccactactatggaatct
cttagtgcttctcaacaagcaaattcctttttctccacttctgtgcttcaactgtatgct
gggggtcatatggagtggccgcaatttgattggatgtatgttgattgtttccctgatctt
attcaactttcctgcatgttacctcagaaggaagataatttaagaactcgaattacaaag
ttccttttggatgtaaatatactctttggggatgattacgttgaacacataatgcttcct
gttttcctggtcgccatcggggattgtgatagtgctgatttgacattttttcctccgtct
atccactcaagaatcaaaggtttgcgacctaaaactgctacagctgagaggcttgctatc
atgtgtgtgcttccactattgttatctggtatattgggtgctcgtagtagtaatgaacaa
ctttcagaatacttgcgaaagctattagtgaacaatacaattagtgatgattcctggtct
ggttatcgtgttgctgaggttatcgatgccgtccgcttcctttgcacatttgaaaagcat
catggagtcattttcaatgttctctgggacatggttgtgagctccaatgctgatatgaag
attgaggctgcaaatcttttaaaagtcctggtgccctatgtcgatgctaaagtcgcatca
actcaagttttgccagcacttgtcactcttggctccgatcaaaatttagatgttaaatat
gcaagtataaacacgtttggagctgttgctcagtatttcaaagatgacatgatcgttgaa
aaaatacgcatacagatggatgctttcctagaagacggatcactcgaagctacaatttct
gttatacgtgcattagttgtggcagtaccacatacgacagagagattgcgagaatatctt
ttgtcgaagatattccagcttacagcccttccatcccatggaaaggatgttgtacgtcgt
cgtgagaaagcaaatgtgttttgtgaagcagtacgcgctcttgatgctacagatcttcca
ttaactagcgtccgggacctcctcataccagccataaccaacctactcaaggacccagac
tcactagatccagctcacaaggaagccttagaaatcataatgaaggagagatcagccgga
gcatttgagagcataagcaaagtaatgggggcccacctcgggatcgcaacatcggttacc
agcttttttggtgaaggcggccttagaggaaagaaagacattgcagacccacaagagact
attattagttcccctcctcaaccgagcccttcagctactcaagatggcacgaggtttcag
cgaatgatgagaggtgggcttggggagatgttacgaggcaaagggaagggacctgaggat
tctcctggcaagcccgcctaa
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