Asparagus officinalis (garden asparagus): 109831872
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Entry
109831872 CDS
T05243
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109831872
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aof01002
]
109831872
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109831872
04121 Ubiquitin system [BR:
aof04121
]
109831872
Enzymes [BR:
aof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109831872
Peptidases and inhibitors [BR:
aof01002
]
Metallo peptidases
Family M67
109831872
Membrane trafficking [BR:
aof04131
]
Endosome - Lysosome transport
Others
Others
109831872
Ubiquitin system [BR:
aof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
109831872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
109831872
NCBI-ProteinID:
XP_020254927
LinkDB
All DBs
Position
2:complement(82609813..82619689)
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AA seq
508 aa
AA seq
DB search
MAPSMRSINIRDSARKIEVDNRISIRYYSRIAENLLRQARIYREEKNLIDLYIILLRYSS
LMCDTIPSHRDYQALVPKEKTAFKKKLLDVISELESLKPIVTRQVEELNREIAQSDGGER
VSYSSSPTWKQIPGTPSSEQQPTKALSQSFQKHNNVRNHVTSPQNLQLDRQFQKLSLSLP
YPKEETLSRHSILGPTGLRSQWTAPITGIRVQYPSNTDLAHVEIPGVKKDGDYGTLATEE
GDARGTTSDLESVLSLDDGSMVHCLLKESWLLCGANLTQDNFSQLNIRQPSSPPVLAQVQ
PQLHPSKVADPRPGPAKVPMDGMLDSKEYQKLHIPVKMMDCFLRLAEMNTMKNLETCGVL
AGSLKNRMFYVTTLIIPKQESTSDSCQTTDEEEIFNVQDQRSLFPLGWIHTHPTQTCFMS
SIDLHTHYSYQIMLPEAIAIVMAPTDTSRTQGIFHLSDPGGVSVIRNCQERGFHPHEEPP
DGSPIYEHCSHVLMNENLKFDVVDLRNK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctcgatgcggtcgatcaacatcagagactcggcacgaaagatcgaggtcgac
aatcgaatctccatccgctactactctcggatcgcggagaatctcctgagacaggcaaga
atttaccgcgaggagaagaatctcattgatctatacatcatacttctaagatattcaagc
ttgatgtgcgataccataccgtcgcatcgagattaccaagctttggttccaaaggaaaag
actgcctttaagaagaaactcttggatgttataagtgagctagaatcactgaagccaatt
gttacacgtcaagttgaggagctcaacagagagatagcccaatcagacggtggagaaagg
gtttcctatagctcatctcctacttggaagcagattcctggaactccatcaagtgagcag
caacctactaaagccttgtctcagtcattccaaaagcataataatgtaagaaatcacgtg
acgtcaccacagaacttgcagttggacaggcagttccagaaactatccctcagcttacct
tatccaaaggaggaaacactatcaaggcactctattttaggccctactgggctccgcagt
cagtggacagcacctattaccggtataagggtccaatatccaagcaatactgacttggcc
cacgtcgagatcccaggtgtaaagaaggatggtgattatggcactcttgctactgaagaa
ggtgatgctagaggcaccacttctgatttggagtctgtcctctcccttgatgatggcagc
atggtccattgcctgctgaaagaatcatggcttctttgcggagcgaatctgacacaggac
aatttttcccagctgaatattagacaaccttctagtcctccggttcttgctcaggtacag
ccacagttgcatccatcaaaagttgctgatccaagaccaggaccggcaaaagtcccaatg
gatgggatgcttgattctaaagaatatcaaaaactgcacattccagtgaaaatgatggat
tgtttcttgaggctggcagagatgaacaccatgaagaatctggaaacatgtggggttctt
gctggttcattgaaaaacaggatgttttacgtgacaacactgattatccctaagcaggaa
tcaacatccgattcatgtcaaacaacagatgaggaagaaatattcaatgttcaggatcaa
cgttctcttttcccgcttggatggattcatacgcacccaacacaaacctgcttcatgtca
tcgattgatctgcacactcattattcatatcagattatgctaccagaagcaattgcaatt
gtcatggcaccaactgatacatcaagaacccaaggcatatttcacttatcagatcctggc
ggtgtgtctgtgatccgtaactgccaagagcgtggcttccaccctcacgaagagcctcct
gatggcagcccgatatatgaacactgctctcatgttttgatgaacgaaaacttgaaattt
gatgtcgtcgaccttcgaaataaataa
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