Asparagus officinalis (garden asparagus): 109837272
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Entry
109837272 CDS
T05243
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109837272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aof04040
]
109837272
Ion channels [BR:
aof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109837272
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Tn7_TnsC_Int
HTH_17
IQ
UBM
Motif
Other DBs
NCBI-GeneID:
109837272
NCBI-ProteinID:
XP_020261026
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Position
4:complement(40901259..40907607)
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AA seq
628 aa
AA seq
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MVIDLKIGVTVTVFRTITDFFYLFHLVLKFHTAFVAPSSRVFGRGELVRDPYKIAMRYIR
KDFIFDLVATLPIPQFVIWGVIPAVSNSSNHSNNTLCMLVLFQYIPRLLLIFPLNARIVK
ANGVVTKTAWAGAAYNLLLYMLASHALGSLWYLLSMERQYQCWHIECGKENGTMNTPKCD
LTFLDCNRRDLPERKVWLNSTKLLHNCNAQSDDVSFQFGIFSDALSKDIVGASFAAKYLY
CLWWGLRNLSSYGQNLATSTWVGETAFAIVISLLGLVIFSHLIGNMQTFLQSTSVKTEEW
RVKRSDIEEWMRHRQLPPNLQERVRRFVQYKWIATRGVDEESILRDLPLDLRREIQRHLC
IALVRRVPFFSQMDDQLLDAICERLVSSLSIKDTYIVREGDPVNNMLFIIRGTLESSTTN
GGRSGFFNSITLRPGDFCGEELLTWALMPNPNVNYPLSTRTVRALDEVEAFSLQAEDLRF
VSSQFRRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRRYKKRKLGRELAKQESLYYMDDL
GQGTEESEEVHLLSEYDSVDESSSSGDNAGKFPNLGATILASKFAKNTKKGVLKKVKRST
PSSDSIKMPKLLKPDEPDFSMNPDDSLI
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgacctcaagatcggcgtcaccgtcaccgtcttcagaaccatcaccgacttc
ttctacctcttccacctcgtcctcaagttccacaccgccttcgtcgccccctcctcccgc
gtgttcggccgcggggagctcgtccgcgacccgtacaagatcgccatgcgctacatcagg
aaggatttcatcttcgacctcgtcgccacgctccccataccccagtttgtgatatggggt
gtgatcccggcggtgagcaacagttcgaaccacagcaacaacaccctctgcatgctcgtg
ctattccagtacatcccgaggctgttgctcatctttcctctcaacgcgcggatcgtcaag
gccaacggagtcgtcaccaagaccgcctgggctggagctgcctataatctcctcctttat
atgctcgctagccatgcgctggggtctctatggtaccttttgtcgatggaacggcaatat
cagtgctggcacatagagtgtggaaaagagaacggcacgatgaacacaccaaagtgcgac
cttacttttctagattgcaataggagggacctacctgaacggaaagtctggctgaactcg
accaaattgttgcacaattgcaatgcgcagagcgacgatgtcagtttccagtttggaatt
ttctcagatgcattgagtaaagatatcgtgggcgcgtcctttgctgcaaagtatctctat
tgcctctggtggggattgaggaatctaagctcgtacgggcaaaacctggcgaccagcact
tgggttggagaaacagcatttgctatagttataagtctcctgggtcttgtgatattctca
cacctgattggaaacatgcagaccttcttgcaatcaacttctgtgaaaactgaggagtgg
agagttaaaaggagtgacattgaagagtggatgaggcatcgccaattgcctccaaatctg
caagaacgagttcggcggtttgttcaatataaatggattgctactagaggtgtggatgaa
gaatctattctacgggatttacccttagacctccgtcgtgaaattcagaggcacctatgt
attgctcttgttcgtcgtgtcccattcttctcacaaatggatgatcaattgttagacgcc
atatgtgaacgcctagtgtcatctctaagcatcaaagacacatatattgtcagagaagga
gatccagtgaacaacatgctcttcatcattcgaggtacactggagagctccacgacaaac
ggaggcagaagcgggttcttcaactccatcaccctcagacccggagatttctgtggcgag
gagcttcttacatgggccttgatgcccaatcccaacgtcaactatccactctccacacga
actgttcgtgccctagacgaagttgaggcattttctcttcaagccgaagacctcagattt
gtttccagtcagtttagacgactccatagcaaaaagcttcagcatgcgtttagatactat
tctcatcagtggaggacttggggttcttgcttcatccaagctgcatggagaaggtacaag
aagaggaaattgggcagggagttggctaaacaagagagcctttattatatggatgatttg
ggccaaggcactgaagaatctgaagaagttcaccttctcagtgagtatgatagtgttgat
gaatcatcgtcctctggagataatgcaggtaaattccctaatctgggagcgacgatactg
gcttctaaatttgccaagaatacaaagaagggagttcttaagaaagtgaagcgatctact
ccttccagcgatagtataaagatgcccaagctgctgaagccagatgaacccgatttctct
atgaatcctgatgatagtcttatatga
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