Asparagus officinalis (garden asparagus): 109846503
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Entry
109846503 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109846503
Membrane trafficking [BR:
aof04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
109846503
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
109846503
NCBI-ProteinID:
XP_020271360
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All DBs
Position
6:complement(72732850..72770281)
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AA seq
1281 aa
AA seq
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MVLTTTLAEDACQKNGFNFIEMLHPFSVFNRIDVPVRTASDQPYRLQMFKLRLVYSSDMH
QQTYEDAEEKLRKVIGDASEIVSDVHDDPPELESILNQSESEYCPSWIQSFNKELIRTLS
FSEHEAFDHPVACLLVVSSKEDRPINKFIDLFNTDQLPSLLNDGVMDPKILKHYLLLHDN
QDGTLEKATNILAEMRSTFGLYGCKLLCINSAQDVGDGLGENPWIHNKTNSLPGQDLGGC
LNLDDLNGIKDFMQDLASKHIIPSMEQKIRILNQQVSATRKGFRNQIKNLWWRKGKEDAP
EAPNGPTYTFSSIESQIRVLGDYAFMLRDYELALSNYRLLSTDYKLDKSWKRYAGVQEMM
GLAFFMLDQSRKEAEYCMETAFTTYMRLGSVGQRNATRCGLWWAGMLKSXXXXLVRYFKN
QEKKAVFGSIYFXRICFSXEPSLHAAVMLEQASYCYLFSRPPMLRKYGFHLVLSGNRYYV
SDQKPHAIRMYRNALSVYEGHAWKYICDHVHFNVGRWYAFLGISDIAIKHMLEVLACSHQ
SLATQDLFLGEFFQTVEHTGKTFEVNKLQLPVIDMSSYKVIYEDHRTYASSGDANVKESL
WQSLEEDMVPSAYTVRSNWLESQPKFSPSKMYNESHVSVVGEAIKLVVEIKNPLHLSISV
SGISLICYLCASSEATELDISLPATSFQEGKPKEPPSCRDLNNGNASMILPEFDLILGGG
ETKRVQLSVTPKVEGLLKILGIRWKLSGLLGGYQYFEFDTKRKQKRGKKGLKHSSRDDLN
FIVIKGLPKLEGCIQNLPKKAFADDLRLLILELRNQSEHSLKNIKMKISHPRFLIPGSVE
DLNKDFPSCLEAHLSSERKNIQPNGMEKSESLLFSFPSDTTIDGGATFAWPLWLHTALCG
NISLYISIYYEMESCSSDMIYRVLRMHYDVEVLPSLDVSFVITPCPLRVQDFIVRMDIVN
RTSSESFSLQQLSCVGDQWEITSLPTYDFICPSQVLVAGQALSCFFKLKDCRTISDGEGE
LTVQGSDLLLCSQGSSETIVDISNSPLARFHQQERHNQGNSIEGSQGSVDFILISKVQGD
YFNPDLGPPSKLLCGHICHCSISSKIPILWLVDGPRTISHDFSSSFCEVTLVMKIRNRSK
AFVSVKITTFDGIPSDIFQVLDSTENQGGWQDVPLANELKSISHVQGLQPIKLKSQSICP
FVWCASSSTQLKLEPESSKEVPLRICVFSPGTFDLSNYEMHWKLQQIDGDLTDDGKRTSS
GMSRGHPFYLTALQSALVALE
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggtacttactactactcttgccgaagatgcttgtcaaaagaatggattcaacttcata
gagatgctccatccattctctgttttcaacagaatagatgtacctgttcgtacagctagt
gatcaaccttatagactgcaaatgttcaagctgcgcctggtttattcttctgacatgcac
cagcagacttatgaggatgcagaggagaagttgaggaaggtgataggcgatgcaagtgaa
atagtatcagatgtgcatgacgacccaccagaacttgaaagtatacttaaccaatccgag
tctgagtattgcccatcatggattcaatctttcaataaagagctgattcggacactgtcc
ttctcggagcatgaagcttttgaccatcccgtggcatgcctcttggttgtgtcatcaaag
gaagatcgacctatcaacaaatttattgatcttttcaacactgaccagctgccttctctt
ctaaatgatggtgtcatggatccaaagattttgaagcattatcttttgctgcatgataat
caagatggaaccctcgagaaggcaacaaatattttagcagagatgcgaagtacttttggc
ttatatggttgtaagttattgtgcattaattctgctcaagatgtgggcgatgggttggga
gaaaatccttggatacataataaaactaattcattacctggtcaagatcttggtggttgt
cttaatcttgatgatcttaatgggataaaggattttatgcaagatcttgcttcaaaacat
atcattccaagcatggagcaaaaaatacgcattctcaatcagcaggtttctgcaactagg
aagggatttagaaatcaaataaaaaatttgtggtggagaaaagggaaagaagatgcgcca
gaagctcctaatggtcccacttatacattcagctccattgagtctcagatcagagtattg
ggtgactatgctttcatgctgcgtgattatgaacttgccctgtcaaattaccgattgctc
tctacagattacaagcttgataaatcctggaagcgttatgcgggtgtacaggaaatgatg
gggcttgcattctttatgttggatcaatcaagaaaggaggctgaatactgcatggaaact
gcttttactacctacatgagacttggatctgttggtcagagaaatgcaacaaggtgtggg
ctctggtgggcaggcatgctcaagtccagnnnnnnnnnnctagtgaggtacttcaagaat
caagagaagaaggctgtatttggttctatctacttctgaaggatttgtttttcttaggaa
ccttctttgcatgcagctgtaatgcttgaacaggcatcatactgctacttgttttctaga
ccacctatgctacgcaagtatggatttcatcttgttttgtctggtaaccggtactatgta
tcagatcagaaaccacatgcaattcgcatgtatagaaatgcactctctgtgtacgaggga
catgcttggaaatatatctgtgatcatgttcatttcaatgttggaaggtggtatgctttt
cttggaatttctgatattgctatcaagcacatgttggaagttctggcatgcagccatcag
tctttggcgacacaagatttattccttggggaattttttcaaactgttgagcatacgggg
aaaacctttgaagttaacaagctccaattgcccgtgattgacatgtcctcttacaaagtt
atttatgaagatcaccggacttatgcgtcatctggagatgctaatgtgaaagaaagcttg
tggcagtctttagaggaggacatggttccatctgcatatactgtcagatctaattggcta
gaatcacagccaaaattttccccttcgaagatgtataatgagtctcatgttagcgtggta
ggagaagcaataaaacttgttgttgagataaagaacccccttcacctgtcaatttccgtt
tctggcatttcactcatatgctatctatgtgctagttcagaagcgacagaacttgatata
agtttaccggctacaagttttcaggagggtaaacccaaggagcctcctagttgcagagat
ttgaataatggtaatgcttctatgatattgccggagtttgatttaatacttggaggaggt
gagactaagagggtacaactctctgttacccccaaagtggaaggtttgttaaagatattg
ggaattaggtggaaattatctggacttcttggtgggtatcagtactttgagttcgacaca
aagcggaaacaaaaaaggggcaagaaaggcctcaagcattcttcaagggatgacctaaat
tttatagtcattaagggcctaccaaaacttgagggatgtatccaaaacctacccaaaaaa
gcatttgctgacgacttacgactccttattctggaactgagaaatcaatcagaacattcc
ttgaagaacataaaaatgaagatcagccatccgaggttcttgattcctgggagtgtggag
gacctaaacaaggattttcctagttgcttagaggcccatttaagttctgaaagaaagaat
attcaaccaaatggcatggagaagtcagagagtcttttattctcctttcccagcgatact
actattgatgggggagcaacatttgcttggcctctttggcttcatactgcactctgtggc
aatatctccttgtatatatctatatattatgagatggaaagctgttcaagtgacatgatt
taccgtgtgctgcgtatgcattatgatgttgaggtcttgccatccttagatgtatcattc
gtgatcactccttgtccgttgagggtacaagattttattgttcgcatggatattgtgaac
aggacaagttcagagagtttcagtcttcagcagttgtcttgtgttggtgaccaatgggag
attacatccttacccacatatgattttatctgtccttcacaagtactagttgcaggccag
gcattatcatgctttttcaagcttaaggactgtaggacaatttctgatggtgaaggggag
ctcactgttcaaggaagtgatctattgttatgttctcagggaagcagtgagacaatagtt
gacatttctaactcacctttggctagatttcatcagcaagaaagacataaccagggcaat
tcaattgagggaagtcaaggcagtgttgacttcatcctgatctcaaaggtgcaaggagat
tattttaaccctgatctagggcctccctcgaagcttttatgtggtcacatttgccattgc
agtatcagcagcaaaatccctatattatggcttgtggatggacctcggacaataagtcat
gatttttcaagctctttttgtgaggttactcttgttatgaagatccgcaatcgctccaaa
gcttttgtatctgttaaaatcactacatttgatggcattccaagtgatatatttcaagta
ttggactcgacagaaaatcaaggaggatggcaagatgttccgttagcaaatgaactgaag
tcaatttcccatgtacaagggcttcaacccattaaactaaaatcgcagagcatttgtccc
tttgtttggtgtgcatcaagctcaacacagttgaagcttgaaccagagagctcaaaagaa
gttcctctccggatctgtgttttttcaccaggaaccttcgatttatcaaattacgagatg
cactggaaacttcaacaaattgatggagatcttacggacgatggaaagagaacttcgtca
gggatgagcagaggtcatcctttctatcttactgctcttcaatctgctctcgtggcctta
gagtga
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integrated database retrieval system
