Asparagus officinalis (garden asparagus): 109850920
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Entry
109850920 CDS
T05243
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109850920
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aof01002
]
109850920
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109850920
Enzymes [BR:
aof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109850920
Peptidases and inhibitors [BR:
aof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109850920
Ubiquitin system [BR:
aof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109850920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
ubiquitin
GLGE_C
Motif
Other DBs
NCBI-GeneID:
109850920
NCBI-ProteinID:
XP_020276593
LinkDB
All DBs
Position
7:139237536..139255591
Genome browser
AA seq
1120 aa
AA seq
DB search
MTIMTPPPLDQEDDEMLVPHSELTDGAQPMEVAPVETATRAESHQQQQQVEDPPTTSRFT
WTIEHFSRLHPKKHYSDVFMVGGYKWRVLIFPKGNNVDHLSMYLDVADSAALPYGWSRYA
QFSLSVINQINSKYSVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYIVNDTCVVEAE
VAVRKVIDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP
SGSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK
GTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYCEVER
LEGDNKYHAENHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLD
LDRENGKYLSPDADRRVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWFKFDDERVTK
EDAKKALEEQYGGEEELPQTTPGFNNTPFKFTKYSNAYMLVYIRESDKDKIVCNVDEKDI
AEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLREQIGRDIYFDLVDHDKVRSF
RIQKQTPFYTFKEEVAKEFGVPVQCQRFWLWARRQNHTYRPNRPLTPQEEAQSVGQLREI
TNKLHIAELKLFLEVEIGLDLQPLPPPDKTKEDILLFFKLYDPEKEELRYVGRLFVKALG
KPTEILSKLNKMAGFLPDEEIELYEEIKYEPSVMCEHIDRKLTFRASQLEDGDIICYQKA
PTPESEDQCRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLELSKLFTYDDVVERVARQ
LGLDDASKIRLTSHNCYSQQPKPQPIKYRGVEHLSEMLVHYNQTSDILYYEILDIPLPEL
QCLKTLKVAFHHATKDEVVIHTIRLPKNSTVGDVINDLKSKVELSQPNAELRLLEVFYHK
IYKIFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQMQVQNFG
EPFFLVIHEGETLSEVKARIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRR
DVYGAWEQYLGLEHADTAPKRLYTANQNRHTYEKPVKIYN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgactataatgacccctcctcccctcgatcaggaagacgacgagatgcttgttccccat
tccgagcttaccgacggagctcagccaatggaagtggcgcccgtggagactgcgaccagg
gccgagagccaccagcagcagcagcaagtggaggatcctcccacgacgtctaggtttacg
tggacgatcgagcatttttcgaggcttcacccaaagaagcactactctgatgttttcatg
gttggcggttacaaatggagagtgttgatatttccaaaagggaacaatgtagaccacttg
tctatgtacttggatgtggctgattcggcggcacttccttatggatggagtagatatgca
caattcagcttgtcggtgatcaatcagataaatagcaagtatagtgtcagaaaagaaaca
caacaccagtttaacgctcgagaaagtgattggggttttacttcatttatgcccctcagt
gagctttatgaccctagtagaggatatattgtgaatgatacctgtgtagttgaagctgag
gttgcggtacgtaaggtaattgactactggaattatgactctaagaaagaaactggttat
gttggccttaagaatcaaggagcaacctgttacatgaactctcttcttcaaactctgtac
catattccctacttcagaaaggctgtttatcatatgcctacaacagaaaatgatatgcca
tctggaagcattcccctggctctgcagagcctgttttataaacttcagtatagtgatagt
agtgttgctaccaaagaactaactaagtcatttggatgggacacatatgattcttttatg
caacatgatgtgcaagaactcaatagagttctttgtgagaagttggaagacaaaatgaag
ggaactgttgttgaaggaacaatacaacaactgtttgaaggacatcatatgaattacatt
gagtgtattaatgtggattataaatccaccagaaaggagtcgttttatgaccttcagcta
gatgtcaagggatgtcgggatgtttatgcttctttcgacaaatactgtgaagttgaaaga
ctcgaaggagataacaagtaccatgctgaaaaccatggcctacaggatgcgaagaagggt
gttctattcattgattttcctcctgtcttgcaactccaactgaagcgatttgaatatgat
ttcatgcgggatacaatggtaaagataaatgatcgttatgagtttcctttgcaactagac
cttgatagagaaaatggaaaatatctttctccagatgcagacaggagagttcgcaacctg
tatactcttcatagtgttcttgttcatagcggtggggtgcatggcggacactactatgct
tttattcgaccaactctatctgagcagtggtttaagtttgatgatgagcgggtaacaaaa
gaagatgcaaagaaggctctagaggagcagtatggtggagaagaagagttacctcagaca
acacctggtttcaataacactccatttaagtttacaaagtattcaaatgcttacatgctt
gtatatattcgagaaagtgacaaggataaaatagtttgcaatgtggatgaaaaagatatt
gctgagcacctcagaataagattgaagaaagaacaagaagaaaaggaacacaagaagaag
gagaaagctgaggcccatctttataccattataaaggttgctcgagatgaagacttgaga
gaacaaattggaagggatatttactttgacctagtggatcatgacaaagttcggagtttc
cgtatccaaaaacagacgcctttctacacgttcaaggaggaggtggccaaagaattcggc
gttcccgtgcaatgtcagcgtttttggctgtgggctagacggcaaaaccatacatatcgt
cccaataggccattgactccacaagaggaagctcaatctgttggacagttaagggagatc
actaacaagttgcatattgctgagctcaaattattcttggaagtggaaattggactggat
cttcaacctcttcctccaccagataaaactaaggaagatatactgctttttttcaagctc
tatgatcctgaaaaggaagagctgaggtatgtgggaaggctctttgtcaaggctttaggg
aagccaacagaaattctctcgaagttgaataagatggctggatttcttccagatgaagaa
attgagctttatgaggaaattaaatatgaacctagtgtaatgtgcgagcacatagacagg
aagctcactttccgagctagccagctggaagatggtgatatcatctgctaccaaaaagct
cccactccagagagtgaagaccagtgtcgctatcctgatgttccatcatttttggaatat
gttcataatcgtcaggttgtccattttcgctcactggagaaaccaaaagaggacgatttt
tgtttggaactgtcaaagcttttcacctatgatgatgttgtggaaagagttgctcgacaa
cttggtttagatgatgcatcaaaaatccgtctaacgtctcacaattgttactctcagcaa
cctaaaccccagccaatcaaataccgcggtgttgagcatctttcagaaatgctcgtccat
tacaatcagacttctgacatattgtattatgaaatactggatattcctcttcctgaactg
caatgtttaaaaactcttaaagttgcatttcatcatgccaccaaggatgaggttgtaatt
cacaccattcgattacccaaaaacagcactgtaggtgatgtaattaatgatctcaagagt
aaggtggagctatctcagccaaatgctgaactcagattgcttgaggtcttctatcacaag
atctataagatatttcctcctaatgaaaagatagaaaacataaatgatcagtactggaca
ttgcgtgcagaagagattccagaagaggagaaaaatcttggtcctcacgatcgcttgatt
catgtctaccatttcatgaaagatcctaatcagaatcagatgcaggttcaaaactttggg
gaaccattcttcttggttattcatgaaggtgaaactttatccgaggtgaaagcacgtatc
caaaagaaactgcaggttcctgatgaagaattctctaagtggaagttcgcatttctatca
cttggtcggcctgagtaccttcaggattcagatattgtatctagccggtttcagcgaaga
gatgtctatggagcttgggaacagtaccttggattggagcacgctgacactgctccaaaa
aggctctacacagccaatcagaaccgacacacatatgaaaagcctgtgaaaatctacaat
tag
DBGET
integrated database retrieval system
