Antiquaquibacter oligotrophicus: LH407_02240
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Entry
LH407_02240 CDS
T09620
Name
(GenBank) Ig-like domain-containing protein
Organism
aog
Antiquaquibacter oligotrophicus
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Motif
Other DBs
NCBI-ProteinID:
UDF13695
LinkDB
All DBs
Position
complement(453728..459601)
Genome browser
AA seq
1957 aa
AA seq
DB search
MIRQWFSSHRSLTASVASGTVIAALIAGVAIVSTGYTAQRFDLGDGSVWVPNNAQQAIGR
ANTEILELNSVVPTTGSDLSVVQDGSSVLLVDRSEARLEVIDPATSESVDSVVLPPERPE
VWTAGPNTVIFEAGSGRVWVVPVDDVAGFDSQAPAVLELGPDALVTVEPDGTLFGWAAAT
GALYRLEASSSEVAQTVGSVQVEAVPGSLTLTSVADRWALWNSASRTVTTEQGSIDLSEF
VPSAAGARIQAPSSVGDRFLLAHSGGLVGVPFDGGAPVEITGDTSGVAAPPFAIGDCEYA
AWTSGQSWRRCGTDAGATIELDSMPSTAALAFVANGSRAVLNDSRSGDSWAIQRDGQLID
NWDDLIVPDDEQPDEELTDENVPTEVEKVQQPPVAVDDEFGARPGRATVLPVLLNDYDAN
GDVLVIDEVTPIDESIGRADLITERQQIQLTLSPGASGTVTFGYSISDGRGGVASANVTV
TVRSPEENSPPIQVRSTSATVEVGGRVATEVLGDWVDPDGDPFYLVDASIPAPDSVAYKP
QGTVVFSDGGEASGAKTVALVVSDGLAQGTGALTVAVLPRGEVPLTARPFVVTAIAGEEL
TVAPLDHVTGGSGTIRLGSVPARSGFTVTPSYETGTFRFVSTEIRTHYVDFVVTDGTQTA
NGVVRVDVVSPTTSTRPITIPKTVFVQTLRNERIDVAGTDVDPAGGVLLVTGIMNLPEGS
GVRAEILEQRLVRVSLESPLDSGPVAFNYRISNGLAEAEGVITVVEIPAPARIQPPIAEE
DSATVRVGDAIDIPVLSNDEHPDGLALTLEPELAQDVPEDGGLLFASGNVLRYLAPETPG
NFTAAYSVSGPDGQLATATVRIAVREEDAATNNPPVPPTVTARVLAGESVSIRIPLTGTD
PDGDSVQLLGQSSNPDKGTVVSADAESLVYEAGEYSAGTDVFTYAVIDALGARATGTIRV
GISPRLDGARNPVAIVDEVTVRPGFTVSVQVLANDSDPDGSPLRVVSAEPNDPETIAQVV
GDVVRVTPPRQEGTYGVIYSIENELGGTSQNFIRVRVAEDAPLAYPVASDTVLTLSDVLD
RDTVMVDVLSQVFFADGDPRSLGLSIYPGFEGSARVLDTKLVEVTIDERRQIIPFRVTHP
EDPEVFSYAFIRVPGFEDALPQLDTRAPALRVNSESTLRIDINDYVIAVGGKQVRLTDSS
SVQATHANGDDLVVDSDTLEFTSAEKYFGPASISFEVTDGTSATDPDGRTATLVLPITVL
PRDNQPPVFTGASLEFEPGQEKVIDLLRLTNYPYPDDLTELAYSIVGTQPTGFTASLSGT
QLTIIAGANAVKGSTGSFGIGVRDDLSEGKSGRVDVRVVASTRPLVRPAPDSAVVRRGET
TTIDVLANDRATNPFPSVPLRVVQIRGLDGSTLPAGLSVRPSSDNSTLVVSVAPSAAPAD
VSFQYQVADATNDPTRFAWGTITASVQDRPDPVTNVAPTSFGDRSITLRWNAGQFNNSPI
TEYRVTIQSAGGAPLGVTTCPTTTCTISTPGNGPGNAVRVSVSAVNAIGASDPVSLLENI
WSDVIPAAPTSLSAEPLNRGLRVSWDRVAMPAGASPVSGYLVTVGGVSTTAGCSTARCSA
DIYDASLTNGSAVTATVSARNDAYSPLAAWNSSSVTGTPAGPPVAGGSPLASVTSDTEIA
LTWAGVFSDNGRPITAYHAAAYTDSAPTCAPDGTINAGGATVNSVGTGTSTSFGGLNANA
EYSFIVFAVNSQGCTASPAVRAQTKPGVITNLTWSGPTARTGTLFDFVLTGGQMGSTALT
SDFRVYYRLNGGTLKGPITIGSFIEADPLQYGTSVAITAVACRVYSGQELCQDVPSASQT
MGVPVNAGASGITYTWDDPSSEAPTGNFAFTGWPTGSYDDVQVACGSSPGAGSFTSISIA
GASCRFEAAAGETPYLTIRVLVAGGTYDASYNGFDYD
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaggcaatggttctcttctcaccgatcgctgacagcgagtgtcgcgagcgggacg
gtcatcgctgcactcatcgcgggtgtggccatcgtgtcgacgggctacacggctcaacga
ttcgacctgggtgacgggtccgtctgggtgccaaacaatgcccagcaggcaatcggtcgt
gcgaataccgaaatcctcgaactgaactcggttgtccccacgaccggaagcgacctctcg
gtcgtccaggatggctcctccgtgctgctcgtggatcgatcggaggcgcgcctcgaggtt
atcgaccctgctacgtcggaatccgtcgacagcgttgtgctcccacctgagcgcccggaa
gtgtggacagcgggaccaaacaccgtcatcttcgaggcggggtcgggtcgtgtctgggtc
gtacccgttgacgatgttgccggattcgattcgcaggccccggccgtcctagaactcggc
cccgatgctcttgtcaccgtcgaaccggacggaacgctattcggttgggccgccgcaacc
ggcgccctgtaccgactcgaggcgagctcatcggaggtcgctcagaccgtggggtccgta
caggtggaggcggtgccaggctccctgacgctgacctcggtcgccgaccgctgggccctg
tggaactcggcgtccagaacggtgacgacggagcagggctcgatcgatctgagcgaattc
gttccctcggcggcaggcgcgcggattcaggctccgagttctgtcggtgatcgattcctc
ctcgcccactccggtgggctcgtcggggtgccgttcgacggtggggctcccgttgagatc
accggcgacacatccggtgttgctgctcctccgttcgcgatcggggactgtgaatacgcg
gcgtggacatccggccaatcgtggcggcgttgcgggacggatgccggtgcgactatcgaa
ctcgattcgatgccgtcgacggcggcgctcgcgtttgtcgccaacggttcgcgtgcggtg
ctcaacgattcgcgatcgggcgattcgtgggcaattcagcgcgatggtcagctgatcgac
aattgggacgacctcatcgttcccgacgacgagcagccagacgaggaactcacggacgag
aacgttcccaccgaggtcgagaaggttcagcaacctcccgtcgctgtcgacgacgagttc
ggggcgcgaccgggtcgagccactgtccttcccgtactgctcaacgactacgacgccaac
ggtgacgtgctcgtcatcgacgaggtaacaccgatcgacgagtcgatcgggcgcgccgac
ctcatcacagagcgtcagcagattcaactgaccctctctcccggagcgagcggaaccgtg
acgttcggctactcgatctccgatggccgcggaggagtggcctccgccaatgtcaccgtg
acggtgaggtcgccagaggaaaactctccgccgattcaagtgcgatcaaccagcgccacc
gtcgaggtgggcggccgcgtggcgaccgaggtgctgggggactgggtcgaccccgacggc
gacccgttctacctcgtggacgcgagcatccccgcgcctgacagcgtcgcatacaagcct
cagggcacggtcgtcttctccgacggaggggaggcctcaggggccaagaccgtggcgctc
gtcgtctcggacggtttggctcagggcacgggcgcgctcacggttgcggtgctcccgcgc
ggagaggtgcctctcactgcgcggccgtttgtcgtgacggccatcgctggcgaggaactc
acggtggctccgctcgatcacgtcacgggcggatccggaacgatccgcctcggcagtgtt
ccggcacgctctggctttaccgtcaccccaagctacgaaacgggcacattccgcttcgtc
agtaccgagatccgcacccactacgtcgactttgtcgtcaccgacggcacacagaccgcc
aacggggtcgttcgtgtcgatgtggtctcgccgacgacgagtacgcggcccatcacgatc
cccaaaaccgtttttgttcagaccctgcgcaacgagagaatcgacgtcgcaggtaccgat
gtcgacccggccggaggcgttctcctcgtcacggggatcatgaacctccccgaaggatcg
ggagtacgggccgagatcctcgagcagcgacttgtgcgagtgagcctggaatcccccttg
gattcggggccggttgccttcaactatcgaataagcaacggtctcgccgaagccgagggt
gtcatcaccgtcgtcgagatccccgcaccggctcgaatccagccacccatcgccgaagag
gactccgcgacggtcagggtcggggatgccatcgacatccccgttctcagcaacgacgag
catccggatggcctcgctctcaccctcgaacccgaacttgcgcaggacgtgccagaggac
ggcggattgctcttcgcgtcgggcaacgtattgcgttatctcgcacccgagacaccgggt
aacttcacggcggcctactcggtgtcagggccggacgggcaactcgcgaccgcaacggtt
cgcatcgcggttcgagaagaggatgccgcgaccaacaaccctcccgtgccacccaccgtc
acggcgcgcgtcctcgccggcgagagtgtgagcatccgcattccgctcaccgggaccgac
ccggacggcgactccgtgcagctcttgggtcagtccagcaatccagacaagggaacggtc
gtctccgcggatgccgagtcgctcgtttatgaggcgggggagtactccgccggcaccgac
gtcttcacctacgcggtcatcgacgccttgggcgccagggccaccggcaccatcagggtc
ggcatcagcccacgcctcgatggcgcgcgtaacccggtcgctatcgtcgacgaggtgacc
gtgcgccccggcttcaccgtctccgtgcaggtgctcgccaacgactccgacccagacggt
agtcccctgcgtgtggtctcggcggaacccaacgaccccgagaccatcgcccaggttgtg
ggagacgtcgttcgcgtgacaccgccgcgtcaggagggcacgtacggcgtcatctacagc
atcgaaaacgaacttggcggtacgagccagaacttcatccgagtgcgggtggccgaggat
gccccgctcgcctatcccgtcgcttcggacacggtattgacgctctcggatgtgcttgat
cgcgacaccgtcatggtcgatgttctctcgcaagtgtttttcgccgacggtgatccgcgc
tcgctggggctgagcatctacccgggcttcgaggggtcggcgcgtgtcctcgacaccaag
ctcgtggaggtgaccatcgatgagcggcgccaaatcatcccgttccgggtcacccatccc
gaggaccccgaggtgttcagttacgccttcattcgtgttccggggttcgaggatgccctt
ccgcaactcgatactcgtgcaccggcgttacgggtcaacagcgagtcgaccctgcgcatc
gacatcaatgactacgtcatcgctgtcgggggcaaacaggtcaggctcaccgattcgagc
tccgtgcaggcgacccacgccaacggcgacgatctcgtcgtggactctgacacactcgag
ttcacctcggccgagaagtacttcggcccggcatccatttccttcgaggtgaccgacggg
acgagcgcgaccgaccctgatggtcgaaccgcgaccctcgtgctgccgatcaccgtgctg
ccgagagataaccagccgccggtgttcacgggcgcgtcgctcgagttcgaaccggggcaa
gagaaggtcatcgatctgctccggctcacaaattacccgtaccccgatgacctcaccgag
ctcgcctactcgatcgtgggaacacagccgacaggattcacggcttcactcagcggaacg
cagctgaccatcatcgctggtgccaacgcggtcaaggggtcgaccggatcgttcggtatc
ggcgttcgcgacgatctgagcgagggcaagtcgggtcgggtcgatgtgcgggttgttgcc
tcgacgagaccgcttgtgcgccctgcgcccgacagcgctgttgtgcgccgtggcgaaacc
accacaatcgatgtgctcgccaacgaccgcgccacaaatcccttcccctcggtgccgttg
cgtgtcgtccagattcgcggcctcgatggcagcacgcttcccgcggggttgtccgtgcgc
ccgagctcggacaattcgaccctcgtcgtcagcgtcgcgccctccgccgcgcctgcggac
gtgagtttccagtaccaggtagctgatgcgaccaacgatccgactcgttttgcgtgggga
acgatcaccgcatccgtgcaggaccgtccagatccggtgacgaacgttgccccgacgtcg
ttcggcgatcgcagcatcactctgcgctggaacgcgggccagttcaacaattcgcccatc
accgaataccgggtcacaatccagtcagcgggcggtgctcctctcggggttacgacgtgc
ccgacaacaacctgcacgatctcgactcccggaaacgggccgggcaacgccgtgcgcgtg
tctgtctcggcggtgaacgcgatcggtgcgtccgatcccgtgtcgctcctcgagaacatc
tggtccgatgtcatccccgcagcacccacgagtctgagcgccgagcccctcaaccgcggg
ctgcgtgtgtcgtgggatcgcgtagcaatgcccgccggcgcatcgccggtgtcgggttat
ctcgtcacggtcgggggagtgagtacgacggccggatgctcgaccgcgcggtgctcggcg
gacatctacgacgcgtccctgaccaacggatctgccgtcacggcgaccgttagcgcccgc
aacgacgcctacagtcctctcgccgcgtggaattcctcgtcggtcacgggaaccccagct
ggtccgcccgtggcagggggaagcccgctcgcctccgtgacgagcgacaccgagatcgct
ctcacgtgggcgggtgtgttcagcgacaacggccgaccgatcaccgcgtatcacgcagcg
gcatacaccgattccgccccaacgtgcgccccggacggcacgatcaacgccggcggtgcc
accgtgaattcagtcggcacgggcacctcgacatcgttcggcggattgaacgccaacgcc
gagtattcgttcatcgttttcgcggtgaacagccagggctgtaccgcgagcccggcagtt
cgtgcgcagaccaaaccgggtgtgatcaccaacctcacctggagcggtcccaccgcgcgc
acgggaacattgttcgactttgttctcacgggcgggcagatgggctcgacggcgctcacg
agcgatttccgtgtgtactacaggctcaatggcggcacgctgaaggggccgatcacgatc
gggtcgttcatcgaggccgaccctctgcagtacggaacgtctgtggcgatcaccgccgtc
gcgtgccgggtgtactcgggacaggagctgtgtcaggacgttccctccgcctctcagacc
atgggtgtccccgtcaatgcgggcgcgagtggcatcacgtacacctgggatgacccttca
tctgaggcgcccaccggtaacttcgccttcaccggatggccgaccggaagctacgacgac
gtgcaagtcgcgtgcggttccagtccgggcgcgggtagttttacgagtatctcgatcgcg
ggggcatcctgccgattcgaggccgcggcgggggagaccccgtacctcacgattcgtgtg
cttgtcgcgggtgggacctacgacgcgagttacaacggattcgactatgactga
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