Amycolatopsis keratiniphila: AORI_8100
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Entry
AORI_8100 CDS
T02678
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aoi
Amycolatopsis keratiniphila
Pathway
aoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AORI_8100 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoi03019
]
AORI_8100 (pcnB)
Enzymes [BR:
aoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AORI_8100 (pcnB)
Messenger RNA biogenesis [BR:
aoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AORI_8100 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AGM10681
UniProt:
R4TER1
LinkDB
All DBs
Position
complement(8925501..8926919)
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AA seq
472 aa
AA seq
DB search
MQNAVTELMRISPLADELAKLFAKAGHSLYLVGGSVRDMMLRRLSSDLDFTTDARPDQVL
KIVSAWGDAVWDVGIAFGTVGVTKQGMTLEITTFRADSYDRVGRNPEVTFGDSIEGDLLR
RDFTVNAMAIDLANKTFVDPHDGLQALQDKVLDTPATPQESFADDPLRMLRAARFSAQLG
FTAAPRVVDAMSSMAEEIDRITAERVQAELSKLLLADDPRPGIELLVDTRLADRVLPEVP
GMRLAIDEHHQHKDVYQHSLTVLAQAIDLEKSHEPTSEPDLILRLAALLHDIGKPATREF
QPGGGVSFHHHEVVGAKMARKRLRALKFSKEIVQDVSQLVFLHLRFHGYGKGEWTDSAVR
RYVTDAGDLLPRLHKLVRADCTTRNRKKAAALQATYDDLERRIAAIQAQEDLDRVRPDLN
GEEIMRILDLKPGPDVGKAWKHLKELRLDRGPLEHDEAVAELKKWAAENGIG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgctgtgacggagctgatgcgcatctccccgctggcggacgagctcgcgaag
ctcttcgcgaaggcggggcacagcctgtacctggtcggcggcagcgtccgcgacatgatg
ctccggaggctgtcgagcgacctcgacttcaccaccgacgcccggccggaccaggtgctc
aagatcgtcagcgcctggggcgacgcggtgtgggacgtcggcatcgcgttcggcaccgtc
ggcgtgaccaaacagggcatgaccctggagatcaccacgttccgcgccgacagctacgac
cgcgtcggccgcaaccccgaggtcaccttcggcgacagcatcgagggcgacctgctccgc
cgcgacttcacggtcaacgcgatggcgatcgacctggcgaacaagaccttcgtcgacccg
cacgacgggctccaggcgctgcaggacaaggtgctcgacacacccgcgaccccgcaggag
tccttcgccgacgacccgctgcgcatgctgcgggccgcgcggttctccgcgcagctcggg
ttcaccgcggcgccgcgcgtggtcgacgcgatgtcgtcgatggccgaggagatcgaccgg
atcaccgccgagcgcgtccaggccgagctgtcgaagctgctgctcgcggacgacccccgg
cccgggatcgagctgctggtggacacccggctcgccgatcgcgtgctccccgaggtgccg
gggatgcggctggcgatcgacgagcaccaccagcacaaggacgtctaccagcactcgctg
accgtgctcgcgcaggcgatcgacctggagaagtcgcacgaaccgacctccgaaccggat
ctgatcctgcggctcgcggcgctcctgcacgacatcggcaagcccgcgacgcgcgagttc
cagcccggcggcggcgtgagcttccaccatcacgaggtcgtcggcgcgaagatggcgcgc
aagcgtttgcgggcgctgaagttctcgaaggagatcgtccaggacgtcagccagctcgtg
ttcctgcacctgcggttccacggctacggcaagggcgaatggacggattcggcggtgcgg
cgctacgtcaccgatgccggtgacctgctgccccggctgcacaagctcgtgcgcgccgat
tgcaccacgcgaaaccgcaagaaggcggccgcgctgcaggcgacctacgacgacctcgag
cggcggatcgcggcgatccaggcccaggaggacctcgaccgggtccggccggacctcaac
ggcgaggagatcatgcggatcctcgacctcaagccggggccggacgtcggcaaggcatgg
aagcacctgaaggaactgcggctcgaccgcggcccgctggagcacgacgaggcggtggcc
gaattgaagaagtgggccgccgagaacggcataggctga
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