Bradyrhizobium oligotrophicum: S58_16390
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Entry
S58_16390 CDS
T02484
Name
(GenBank) type III restriction enzyme
KO
K19789
DNA repair protein RadD
Organism
aol
Bradyrhizobium oligotrophicum
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_16390
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
S58_16390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
SWI2_SNF2
Helicase_RecD
DZR
Motif
Other DBs
NCBI-ProteinID:
BAM87647
UniProt:
M4Z415
LinkDB
All DBs
Position
1898985..1900928
Genome browser
AA seq
647 aa
AA seq
DB search
MPVDLRDYQRKACDAPYEYWSEKPRGNPLIVVPTGGGKSMILGTICEEFIGFEPTTRMIM
ATHVKELVQQNFEELLGIWPFAPAGVYAASLKRKEVHNQITFGSIQSMFRVAEKFGRIDV
LLIDEAHLVPPDEAAMYGKFIKALRAVNPDMLILGLTATPYRLNSGMLTEGDDALFDDII
YEISIKELIDMGYLCPLVSKATQTVFDLKGVGRAGGDFKIGALQAAVDKHPVTEAAVKEV
IAFARSNEHPRKSWLFFCSGVDHALHVRDEIRRHGYSCEAIHGDTDDGDRDRWIKEFKAG
KITALTNANVLTTGFNAPRTDLLAMLRPTESTALYVQMVGRGTRCMGKNIHESIRNGKSD
CLVLDFAGNVRRHGPVDQVKVRKPGKGGGEAPVKECPECHSLIFAGLRECPDCGHAFERD
VEKNIKQTADAVPILSTSKPNWVKVNRRTFYRHDKPGGTPSVRVEYVCGFTVHKEWICPE
HKGFARVKFEKWWKEHGGGDDAPFTINDTLSAAGKKVLRETTEIMIRANGRHYEVIGRKL
GAPGELTQDNFVSVQPSREEIVAQNYELNGKPEEAARYRAQVAARATANDNQRPAMPGTS
RVPAAKASMPGHAKPVTQLRTSGEPKADRDVFAGTWGKQDLDDDIPF
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgacctccgcgattatcaacgcaaggcgtgtgacgcgccttatgagtactgg
tccgagaagcccaggggtaacccgctgatcgtggtcccgaccggcggcggcaaatccatg
atcttgggcacgatctgcgaagagttcatcggcttcgagccgacgacgcgcatgatcatg
gcaacgcacgtcaaggagttggtgcagcaaaatttcgaggagttgcttggcatctggccg
ttcgcaccggccggcgtctacgcggcttcgctgaagcgcaaagaggtgcacaatcagatc
accttcggcagcatccagtcgatgttccgcgtggccgagaagttcggccgcatcgacgtg
ctgctgatcgacgaagcgcatctcgtgccgccggacgaagcggccatgtacggcaaattc
ataaaggcgctgcgcgcggtcaatcccgacatgctgatattggggctgaccgccacgcct
taccggctcaactcgggcatgctcaccgaaggcgacgacgcgctgttcgatgacatcatc
tatgaaatctcgatcaaagagctgatcgacatgggctacctctgtccgctcgtctcgaag
gcgacgcagacggtgttcgatctgaagggcgtcggccgggctgggggtgacttcaagatc
ggtgcgctccaggctgccgtggataagcacccggtcacggaggcggcagtcaaggaggtg
atcgcgttcgcgaggagcaacgagcatccgcgcaagtcgtggctgttcttctgctcgggc
gtcgatcatgccctgcatgtccgcgacgaaatccggcgacacggctattcatgcgaggcg
atccacggcgacaccgatgacggagatcgtgaccggtggattaaggagttcaaggcgggc
aagatcacggcgctcaccaacgcgaacgtgctcacgaccggcttcaacgcgccgcgcact
gatctgctcgcgatgctgcgaccgaccgagtcgacggcgctgtacgtgcagatggtcggc
cgtggcacgcgctgcatgggcaagaacatccacgagtcgatccgcaacggaaaatctgac
tgcctggttctcgacttcgcgggcaacgtccggcggcatggtccggtggatcaggtgaag
gtgcggaagcctggtaagggcggcggcgaagccccggtcaaggaatgtccggagtgtcac
tcgctgatatttgcgggcctgcgcgagtgcccggattgcggccacgccttcgagcgcgat
gtcgagaagaacatcaagcaaaccgccgacgcggtgccgatcctgtccacatcgaagccc
aattgggtgaaggtcaaccggcgcacgttctatcgccacgacaagccgggcggcaccccc
agcgtccgcgtcgagtatgtgtgcggcttcacggtgcacaaggaatggatttgcccggag
cacaagggcttcgcgcgcgtcaagttcgagaagtggtggaaggagcacggtggtggcgac
gatgcgccgttcacgatcaacgacacgctctcggcggcaggcaagaaggtgctgcgcgag
acgacggagatcatgatccgcgccaacgggcggcactatgaggtgatcggccgcaagctg
ggagcgcccggcgagttgacgcaggacaacttcgtctcggtccagccctcgcgtgaggag
atcgtcgcgcaaaactatgaactcaacgggaagccggaagaggcggcccgctaccgcgcc
caggtcgcggccagagcgaccgcgaacgacaaccagcgcccggcgatgcccggcacgagc
cgcgtaccggcggcaaaggcgtcgatgccagggcatgcgaagccggtgacgcagctccgt
acgagcggggagcccaaggccgacagggacgtgttcgccggcacatggggcaagcaagac
ctcgacgatgacattccattctga
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