Aquabacterium olei: DEH84_02330
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Entry
DEH84_02330 CDS
T05429
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
aon
Aquabacterium olei
Pathway
aon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DEH84_02330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aon03400
]
DEH84_02330
DNA repair and recombination proteins [BR:
aon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DEH84_02330
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DEH84_02330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_23
AAA_21
RsgA_GTPase
nSTAND3
AAA_25
NACHT
HypA
DUF2972
Motif
Other DBs
NCBI-ProteinID:
AWI52394
UniProt:
A0A2U8FPU1
LinkDB
All DBs
Position
525288..528251
Genome browser
AA seq
987 aa
AA seq
DB search
MSRSVPPIDPTAVVPAAQAAAASLPVAPRLRGEHPTLQIRGARTHNLKNIDLDLPRHELV
VITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQLMDKPDVDVIEGLSPAISIEQ
KATSHNPRSTVGTVTEIHDYLRLLYARAGTPFCPEHGEPLQAQSVSQMVDAVLALPEDTK
LMILAPVVRDRKGEHAELFADMQAQGYVRFRINGQITEAVDLKPLVKNEKHDIDVVVDRV
KVRGDMAQRLAESFETALRLAEGRALALEMDTDKVHLFSAKFACPVCSYSLSELEPRLFS
FNSPQGACPTCDGLGHVIAFDPHRVVAFPSLSIGSGAVKGWDRRNPYTYSLIESVGRHYD
VDIEQPFEELPAHIQHVLLYGSGTDEIEFTYEADGPSGKKRKVKRAHAFEGIIPNFERRF
KETDSAAVREELARYQQPKACPECDGTRLRREARHVKLLDAQTGDRKAIYEIGHATLAEA
HRYFEGLQLQGAKAEIAAKVVNEIRSRLRFLNDVGLNYLSLDRSADTLSGGEAQRIRLAS
QIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLQHLRDLGNSVIVVEHDEDMIRAADHVVD
MGPGAGVHGGRVMAQGKPEEIAANAESLTGQYLARVLGIPVPAERRPFTDETPRLRVVNA
RGHNLKGVTVEVPVGLLTCVTGVSGSGKSTLVNDTLYAAVAKKLYQSHAEPEPHDEIEGL
ELFDKVINVDQSPIGRTPRSNPATYTGLFTPIRELLADVPTARERGYNAGRFSFNVAGGR
CEACQGDGVLKVEMHFLPDVYVPCDVCQGKRYNRETLEVLYKGKNIHEILGLTVEDALEF
FSAVPAIARKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRDTGRTLYILDEP
TTGLHFHDIALLLKVLHQLRDAGNTIVIIEHNLDVIKTADWLIDMGPEGGSGGGELLVAG
TPEAVAAHTGSHTGRYLAPLLSCNRMS
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttccgtgcccccgatcgatcccaccgccgtggtgcctgccgcccaggcggcc
gctgcgtccttgcctgttgccccgcgcctgcgcggcgagcaccccaccctccagatccgc
ggggcgcgcacgcacaacctcaagaacatcgacctggacctgccgcggcatgaactggtg
gtcatcaccggcctgtcgggctcgggcaagtccagcctggcgttcgacacgctgtacgcc
gagggccagcgccgctatgtggagagcctgagcgcctacgcgcgccagttcctgcagctg
atggacaagcccgatgtcgacgtgatcgaggggctgtcgcccgcgatcagcatcgagcag
aaggccaccagccacaacccgcgctcgaccgtgggcacggtcacggagatccacgactac
ctgcgcctgctgtacgcccgtgctggcacgccgttctgccccgagcatggcgagcccctg
caggctcagagcgtgagccagatggtcgacgccgtgctggcgctgccggaggacaccaag
ctgatgatcctcgcgcccgtggtgcgcgaccggaagggcgagcacgccgagctgtttgcc
gacatgcaggcgcaaggctatgtgcgcttccgcatcaacgggcagatcaccgaggcggtc
gatctgaagccgctggtgaagaacgagaagcacgacatcgacgtggtggtcgaccgcgtg
aaggtgcgcggcgacatggcacagcgcctggccgagagcttcgagacggccctgcgtctg
gcagaaggccgcgcgctggcgctcgagatggacacggacaaggtacaccttttctccgcc
aagttcgcctgccccgtgtgcagctactcgctgtcggagctggagccgcggctgttctcg
ttcaactcgccacagggcgcctgcccgacctgcgatgggctgggtcatgtcatcgccttc
gatccgcaccgtgtggtggcgtttccgtcgctgagcatcggcagcggggccgtcaaggga
tgggatcgccgcaacccctacacctacagcctcatcgagagcgtcggtcggcactacgac
gtcgacatcgagcagccgttcgaggagctgcccgcgcacatccagcacgtgctgctgtac
ggttccggtaccgacgaaatcgagttcacttacgaggcggacggcccgagcggcaagaaa
cgcaaggtcaaacgtgcgcacgcattcgagggcatcatcccgaacttcgagcgccgcttc
aaggagacggattcggccgccgtgcgggaagaactggcccgctatcagcagcccaaggcc
tgccccgagtgcgatggcacgcgcctgcgccgcgaggcccgccatgtgaagctgctcgac
gcccagaccggtgaccgcaaggccatttacgagatcggccacgccacgctggccgaggcg
catcgctacttcgaaggactgcagctgcagggcgccaaggccgagatcgcggccaaggtc
gtcaacgagatccgctcgcgcctgcgcttcctcaacgacgtgggcctgaactacctgagt
ctcgaccgcagcgccgacacgctgtcgggcggcgaggcacagcgcatccgtcttgcctcg
caaatcggctcgggtctgactggcgtgatgtacgtgctcgacgagcccagcatcggcctg
caccagcgcgacaacgaccgcctgatcggcacgctgcagcacctgcgcgatctgggcaac
agcgtcatcgtggtcgagcacgacgaggacatgatccgcgccgccgaccacgtggtcgac
atggggccgggcgcgggcgtgcacggtggccgcgtgatggcgcaaggcaagcccgaagag
atcgcggcgaatgccgagagcctgaccggacagtatctggcgcgggtgctgggcatcccc
gttccggccgagcgtcgtcctttcaccgacgagacgccgcgcctgcgcgtggtcaacgca
cgggggcacaacctcaagggcgtcaccgtcgaggtgccggtggggctgctcacgtgcgtt
accggcgtgtcgggctcgggcaagtccacgctggtgaacgacaccctgtatgcggcggtg
gccaagaagctctatcagagccacgccgagcccgagccgcatgacgagatcgaagggctg
gagctgttcgacaaggtcatcaacgtcgaccagtcaccgatcgggcgcacgccgcgctcc
aacccggccacctacaccggcctgttcacgcccatccgcgaactgctggccgacgtgccg
accgcgcgcgagcggggctacaacgccgggcgcttcagcttcaacgtggccggtggccgc
tgcgaagcctgccagggtgatggcgtgctcaaggtcgagatgcacttcctgcccgatgtg
tacgtgccgtgcgacgtgtgccagggcaagcgctacaaccgcgagacgctcgaggtgctc
tacaagggcaagaacatccacgagatcctggggctgacggtcgaggatgcgctggagttc
ttcagcgcggtgccggcgattgcccgcaagctgcagacgctgatggacgtgggcctgggc
tacatccgcctggggcagagcgcgaccacgctgtcgggcggcgaggcccagcgcgtcaag
ctggcgctggagctcagcaagcgcgacaccggccgcacgctctacatcctcgacgagccc
accacgggcctgcacttccacgacatcgcgctgctgctcaaggtgctgcaccaactgcgc
gatgcgggcaacaccatcgtcatcatcgagcacaacctcgacgtcatcaagacggcggac
tggctgatcgacatggggcccgaaggtggatcggggggcggtgagctgctggtggcgggc
acgcccgaggcggtggccgcacatacgggtagccacacggggcggtatctggcgccattg
ctgtcctgcaatcggatgagctga
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integrated database retrieval system
