Anastrepha obliqua (West Indian fruit fly): 129235974
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Entry
129235974 CDS
T09777
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03013
Nucleocytoplasmic transport
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129235974
09122 Translation
03013 Nucleocytoplasmic transport
129235974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129235974
03041 Spliceosome [BR:
aoq03041
]
129235974
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129235974
Spliceosome [BR:
aoq03041
]
Complex C
Other components
EJC/TREX
129235974
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129235974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
MBA1
Motif
Other DBs
NCBI-GeneID:
129235974
NCBI-ProteinID:
XP_054726053
LinkDB
All DBs
Position
1:124402572..124405337
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AA seq
751 aa
AA seq
DB search
MSTAVVTQQRPLGFIGLHTEFTKALNEAFQKKDAQILRASYESFGANTDHDKKSPMDQAF
REMLLFHLSDNVEKVGALVRLSVDAVRVEIVSVTIPVVLLGDIFDAVTLDKCEQIFSFVE
EMVEVWKEDIFFSSCKNNILRMCNDLLRRLSRAQNTVFCGRILLFLSKFFPFSERSGLNI
VSEFNLDNVTEYGVDGKDLDDTVEDTVEDIPIKIDYNLYCKFWSLQDFFRNPNQCYSKAQ
WKMFQAHAGTILEAFDSFKLEEPRLSSAAEKTESAVTADDYLESMKMELSAADISVETEN
QNSSEADQIVRQSDHFFAKFLTNPKLLTLQLSDSNFRRSVLVQFLILFQYLQLTVKFKTE
SNTLTTAQTDFIKETQAKVYKLLEETPPNGKRFSCTVQHMLTREEMWNNWKNDGCKEFRK
PDEAEADNSTNKDAGNADGTPAKPPAAKRSKRTLGDSLREAHRNGKFFLGNDVLTRLWNY
SPDNLQACKSEERNFLPHVETFLENPHEKNDPSFEWRALRLLARQSPHFFTFLNSPSYKI
ADYLEGVRRRLAKDRIDNAKAAMNANNAALVGSNSTADTVNATESNSEQGSNTQETEGEP
DADGVGDGEGEGENDGDGSGDGDGDAMLTEEDVQGDLDKGDDDRNAHTKPMTASREQIEE
IAPLIGDDWKKLGKKLGYTVDELLYFETEHPDRDGGCIAMLSNWFADDDDASLDNWAYML
EGLEINAAAKAVKALIDRLTPKEDKVEVLSD
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagctgttgtaactcagcagcggcccctaggctttattggtttgcatacggaa
tttacaaaagcactcaacgaagcattccaaaagaaggacgctcaaatattgcgcgcctct
tacgaatccttcggcgctaatactgatcatgataagaagtcgcctatggatcaagctttt
cgtgaaatgctactattccacctgagtgacaatgttgagaaggtcggggctctggtgcgg
ctatcagttgacgctgtgcgcgtagaaattgtctcagtgaccataccagttgtgctgttg
ggcgacatcttcgatgcagtcacgctggataagtgtgaacaaatctttagtttcgttgaa
gaaatggttgaagtgtggaaggaggatatattcttctcatcttgtaaaaataatatacta
agaatgtgcaacgatcttttacggcgtttgtcgcgcgcacagaatactgttttttgtgga
cgtatattgctatttctgtccaaatttttccctttctccgaacgttcaggattaaatatt
gtatcggaattcaatttagacaatgtcactgagtacggcgtggatggcaaagacctggac
gatactgtggaagataccgtggaggatattcctattaaaattgattataatctgtattgc
aaattttggtcattacaagactttttccgcaacccgaaccagtgctatagtaaagcacaa
tggaaaatgttccaagcacatgcaggtactatattagaagcgttcgacagtttcaagttg
gaggagccacggctaagtagcgcggcagaaaaaactgaaagtgctgttacggcggatgat
tacttagaaagtatgaaaatggaattgagtgctgccgatatttcagtggaaacggaaaat
caaaattcaagtgaggcagatcagattgtgcgacagtcagatcatttctttgcgaagttt
ctaaccaatccgaaattgctgacacttcagttgtccgactcaaactttcgacgctcagtc
ttagtacagtttctgattctctttcagtatttgcaattaaccgtaaagtttaagactgaa
tcaaacacattaactactgcgcaaacggacttcatcaaagaaacccaagcaaaggtatat
aaattgctcgaagagaccccaccgaatggaaaacgtttttcatgcacggtacaacatatg
ttaacgcgcgaggaaatgtggaacaactggaagaatgatggatgtaaagagttccgcaaa
cccgatgaagctgaggcagataatagcacaaacaaggatgcaggaaacgctgatggtacg
cctgccaaaccacctgcagctaagcgctccaaacgcacacttggtgatagtttgcgagaa
gctcatcgcaatggtaaattctttctgggcaatgatgtcttgacacgcctctggaactac
tcgccagataatttgcaggcctgcaagagcgaggaacgcaattttttgccacatgttgaa
acattcctcgaaaatccgcatgaaaagaacgatccatcatttgaatggcgcgcactccgt
ttactagccaggcagtcgccacattttttcacattcttaaactcgccatcatataaaatt
gctgactatctggagggagtacgccgtcgtttagccaaggatcgtatagataatgccaaa
gcggctatgaatgccaacaacgccgcattagttggtagcaattcaactgccgatactgtt
aatgcgaccgaatctaatagcgagcagggatcgaacacccaagaaacagagggtgaacca
gatgcggatggtgttggtgacggtgaaggtgaaggggaaaatgacggtgatggcagcggt
gatggtgacggtgatgccatgttaaccgaagaggatgtgcaaggagacttggacaaaggc
gatgatgatcgcaatgcacacaccaaaccgatgacggcctccagagaacaaatagaggaa
attgcgccactcattggtgatgactggaaaaaattgggcaaaaaattagggtacactgtt
gatgagctgctatactttgagacggaacatccagatcgtgatggtgggtgcatcgcaatg
cttagtaactggttcgccgatgacgatgacgcaagtctcgataattgggcttatatgctg
gaaggtttggagataaatgccgcagcaaaggcggtaaaagcgctcatagaccgactcaca
cccaaagaggacaaagtggaggtgctatcagattag
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