Anastrepha obliqua (West Indian fruit fly): 129240788
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Entry
129240788 CDS
T09777
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129240788
03016 Transfer RNA biogenesis [BR:
aoq03016
]
129240788
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129240788
Spliceosome [BR:
aoq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129240788
Transfer RNA biogenesis [BR:
aoq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129240788
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
Motif
Other DBs
NCBI-GeneID:
129240788
NCBI-ProteinID:
XP_054732754
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All DBs
Position
3:137428895..137431767
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AA seq
727 aa
AA seq
DB search
MTAFEEFGVLPEIGKAIDDMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQTVWETLRDLEEGKVSKTSGAGGSIAPWTMSFFDRGSALAVTPDGMRCQSREFKEWHGC
RATTGVRGKGKFFFEATVTDEGLCRVGWSTEQANLDLGTCRNGYGFGGTGKKSNNRQFDD
YGEAFGKNDVIGCYLDLQRLEISFAKNGKPLGLSFRIPENQRNETFYPAVVLKNAEMLFN
FGKTDFKYPPKDGFIAVCQAGSERSKSNPLASPTTNAAANKPAPNAPQAIIIEPSRELAE
QTYNQIEKFRVHLSNPDVRSLLLIGGVKLEQQKSSLQQGVHIVVGTPGRLEEMISSGFVQ
LTHCRFFVLDEADALLKQGYTDLIDRLHKQIPKMTSDGRRLQMVVCSATLHAFEVKKMAD
RLMHFPTWVDLKGEDAVPETVHHVVCMVDPQKDITWHNLRQHIRTDGVHARDNVHPQNHT
PETLSEAIKILKGEYCIAAIEQHKMDRAIIFCRTKVDCDNLENYLKSRGGQRYSCVCLHG
DRRPQERKQNLEMFKREQVKFLICTDVAARGLDITGLPFMINVTLPDEKSNYVHRIGRVG
RAERMGLAISLVASVPEKVWYHGEWCPTRGRNCQNTNLTDVRGCCIWYNEMNLLADIEDH
LNITIQQVDKSLAVPLNDFDGKVIYGQKNLNTGTGYKDHVQQLGPVVRKLTELELQSQSL
FLKRLKF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttgaagaatttggtgtgttgcccgaaatcggtaaggcgattgacgacatg
gagtggactctgccaactgatgtacaagccgaagctataccacttatccttggtgggggc
gatgtacttatggcagcggaaactggttccggcaaaactggagctttttgtttacccatt
ttgcaaactgtttgggaaacgttacgcgatctggaggaaggaaaagtaagtaagacttct
ggtgccggtggcagtattgcaccttggacgatgtcgttctttgaccgaggatcagcactt
gctgtcacaccggatggaatgcgttgtcagtcacgtgaattcaaagaatggcacggttgt
cgtgctacgaccggtgtacgtggcaaaggtaagttcttctttgaggccaccgtcacggac
gaaggactctgtcgcgtaggttggtccacggaacaagccaatctggatcttggtacctgt
cgtaatggctatggttttggtggtaccggaaaaaagtccaacaatcgccaatttgatgat
tatggtgaggcgtttgggaaaaatgacgtcattggttgctatctcgatctacagcgcttg
gaaatatcctttgctaagaacggcaaaccattaggtttgtcatttcgaatacccgaaaat
caacgcaatgaaaccttttatccagctgttgtgttaaaaaatgccgaaatgctgttcaat
ttcggtaagaccgattttaagtatccacctaaagatggttttatcgctgtatgtcaagcc
ggctcagagcgatcaaaatctaatccgctggctagccctacaacaaatgctgcagctaac
aagccagcaccaaatgcaccccaggcaattattatagaacccagccgcgaacttgcggag
caaacctataatcaaattgaaaagtttcgagtacatttgagtaaccctgatgtacgttca
cttttgctaattggaggcgttaagctagagcagcaaaaaagttctctacaacaaggagtt
catattgtggtgggtacaccaggtcgtcttgaagagatgattagcagtggatttgtgcaa
ttaacacactgcagattttttgtactggacgaagctgatgccttactcaagcaaggctat
actgatttgatcgatcgacttcacaagcaaataccaaaaatgacatccgatggtcgacgt
ttacagatggttgtttgttctgctaccctacatgcattcgaagtgaaaaagatggccgat
cgcctgatgcacttccccacctgggtagatcttaaaggcgaagatgcagtgccagaaact
gtgcatcatgtggtttgcatggttgacccacagaaggatataacctggcacaaccttcga
caacacatacgcactgatggtgtccacgcgcgagataatgtgcatccgcagaatcacaca
cctgaaacattatcagaggccattaaaattcttaaaggcgaatattgtatagctgcgatt
gagcaacacaaaatggatcgtgccattattttctgccgcactaaggtagattgtgacaat
ttggaaaattacctaaagtcgcgcggtggccaacgatattcgtgtgtttgtctacatgga
gatcggaggcctcaggagcgcaaacaaaatttggaaatgtttaagcgtgaacaagtaaaa
tttctcatttgtactgatgtagctgcgagaggtttggatataactggtctccctttcatg
ataaatgtaactttgcccgatgagaagtcaaattatgtacatcgaatcggtcgtgttggt
cgcgcagagcgaatgggcttggccattagcttagtagcttccgtgccagaaaaggtttgg
tatcatggggagtggtgcccaacacgcggccgaaattgccaaaatacaaacctaactgac
gtgcgtggctgttgtatttggtacaatgaaatgaatttgttagctgatatagaggatcat
ctcaacattaccattcagcaagttgataagtctttggcagtgccccttaatgatttcgat
ggtaaagttatttatggccaaaagaatttaaatactggcactggatataaggatcatgtg
caacagttggggccagttgtgcgaaagttaaccgaacttgaattgcagtcacaatcttta
ttcttgaagcgcttgaaattttaa
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