Anastrepha obliqua (West Indian fruit fly): 129241092
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Entry
129241092 CDS
T09777
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129241092
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129241092
BRITE hierarchy
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
129241092
NCBI-ProteinID:
XP_054733227
LinkDB
All DBs
Position
3:2424018..2429785
Genome browser
AA seq
1227 aa
AA seq
DB search
MIKRPQRGETEDDILRMQNEFLSQRAKNPKLQPAAQCVQVKRDAKKSLFLRAREKAEDSA
QQLPKHIEPLSSVKQEIMGEIHEKIVGNLDEKRVENFSDVVLGDVVEKKYNAPKQNYTIN
SEEMIGFPTVKIATLEQPLQCGKSLFASNRGAIKQPINTNESVAPKDLSQIYGDKSVIVS
DSSIGAEVHKENLAVLSKMNEDNILAEREKLLNSIDPTLLDLLRKKRKEKLNCLDQASGS
TATVCNASEKTDMQDDMGMNRYNNNNDMDISSVLSPSNAALEILQKSDTEKWIHFDVVET
DKLKWMRDIEDHIPNVKPGDQFEARFDWKGVLLPYLLETTASKSSSEDNTPGIQKDDREL
YFHGEEPNRPGYTLQELFRLARSNVMQQRIYAFRAIGGILNIYNQGFYDSVLELPISKIF
FLLRFGFDDNTPAMLEIVSKALARLFYNEADEILLDFIFDNPGCHWQPVLDTVDAGTDMK
DINALESLQKQMQQLQMNDQGNRSIFQSDFEENESDSNTSMSDFQLAETNLIECLMRTNI
LQRIYFILHAVKPENSTVSSCLQILIRLARTSKDIAGKIVSNQDLMHSLFEYFLPDLGRL
EANVDESQFYYRPQFLCLKLLRVLITQNLGIAVRLMNMKLSETLTNYLSYRGDIQDMMIK
VQIECLRIVRCLLLLRIDDSLYGCLDSAFYYMLQWHCNYLKFEVGGPYLIRQHASALLMA
ISSEPCSAKSNRILSEMLNKCCCAWYYRATRSDVTEFSQATLLSACLNVVIWGLRRDEEK
YFREFIAKYLRDFLHSESFKKCVHQLNTSSVILRKSGDRRFVHSALPNVGAVLLHEDGPL
LIIPQTYAVYLLSTLWSLLELQIGQTHALLMDALLTPQVVDSFVQYISLLSTGLNYYLSS
NFFSKIEVKFIYKLLSCSNLLSHFNSSQILQLVYSYVCCLGAEYISEIEQLFDRIIFNPK
YINVSESALDKWKTIFIGLAQSHYIIVEPSNLSLSKSTQTSAILSRDWPYFFFKIILQNY
IDNAPNKITVDFSEREVLEMTLTLVTQLEESSSNLEIATPTEELMYAMIAFMGPESEFLT
DRMRPLLRKHLLRLYEKHRNYKFDFEKASIGKCKFESLYSLFADHFQATSYGDELFGSLV
LVPMAQKYDSKWRRRMWSDYAPALCYLNCDESLLINGLRSYLEPVEEDTSLKKAYAFALT
TNDVRPGTIPYKIAKYHVEHFKAGSNK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagaccacagagaggtgaaaccgaagatgatatattgcgcatgcagaatgaa
tttttatcacagcgcgctaaaaatccaaaattgcaaccggctgcacaatgtgtccaagtc
aaaagggatgccaagaaatcattgtttttaagagccagagaaaaggcggaagatagtgca
caacaattgcctaagcacattgagcccctttcatcggtaaaacaggaaatcatgggagaa
atacacgagaaaattgttggaaatctggatgaaaaaagggtagaaaattttagcgacgtt
gtgcttggcgatgtagtagaaaaaaaatataatgctccaaagcaaaactacacaataaat
agtgaagaaatgattggctttccgacagtaaaaattgccactttagagcaacctttacaa
tgcggtaagagtctatttgcgagtaatcgtggagctataaagcagcctatcaataccaac
gagtcggtagctcctaaagatctatctcagatttatggagacaaaagtgtaatagttagt
gattcgagtattggggccgaagttcacaaagaaaatttagctgttcttagcaagatgaat
gaagataatatactagctgaacgagaaaagcttttaaattccattgatcccacacttttg
gatttattgaggaaaaagcgtaaagaaaaactgaattgtttagatcaagcaagtggaagt
actgccactgtctgtaacgcctctgaaaaaactgatatgcaagacgacatgggtatgaac
cgttataacaacaacaacgacatggatataagctcagtactgtctccatcgaatgctgcg
cttgaaatattacaaaaaagtgacacagaaaagtggattcacttcgacgtggttgagaca
gataaattgaagtggatgcgagatatagaagatcacattccgaatgtaaagccaggtgat
cagtttgaagcacgcttcgattggaagggagtgctcttaccttacttgcttgaaacaacc
gcttctaaaagttcatcagaagacaatacaccagggattcaaaaggatgatagagaactt
tattttcacggagaagaacctaatcgaccagggtacactcttcaagaattgtttcgttta
gcacgatcaaatgttatgcaacaacgcatatatgcattcagagccattgggggtatccta
aatatttacaatcaaggcttttatgacagtgttttggaattacctatctccaaaatattt
tttttattgcgtttcggatttgatgacaacacaccagctatgctcgaaatcgtttcaaag
gctctggcgcgtctgttctataatgaggctgatgagattttgctcgatttcatcttcgac
aatccaggttgtcattggcagcccgtattagatactgtggacgcagggactgatatgaaa
gatattaatgccttagagagcttgcaaaagcaaatgcagcaattgcagatgaatgatcaa
ggcaatcggtcaatttttcaaagcgatttcgaagaaaacgaaagtgatagtaatacttct
atgagcgattttcagttggcagaaacaaacttaatcgaatgtctgatgcgaacaaacatt
ttgcaacgaatatattttattttgcatgccgttaagcccgaaaacagcacagtttcctct
tgtttacaaattctcatacgattggcacgaacgagcaaggatatcgcaggaaaaattgtt
tccaaccaagatctgatgcattctctgtttgaatattttttgccggacttgggacgtctt
gaagctaatgtggatgagtcacagttttattatcgtcctcaattcctatgtctgaagctt
ttaagagttttaattacacaaaatctggggatcgctgttagactgatgaatatgaagctt
tctgaaacgctgactaactatttgtcttaccgcggtgatattcaagatatgatgataaag
gtgcaaattgagtgtttacgaattgtacgttgtctgttgttattgcgtattgacgattct
ctttatggctgtttggactccgccttttattatatgctgcagtggcattgcaattacttg
aagttcgaagtgggcggcccatatttgattcggcaacacgcgtctgctttattaatggca
attagcagcgagccttgcagtgcgaagtcaaatcgcatattaagtgaaatgctgaacaaa
tgttgctgcgcctggtattatcgtgcaacacgaagtgatgttactgagttttcccaagct
acacttctgagcgcatgtctcaatgtagtgatatggggcctacgacgggatgaagagaag
tactttcgggaatttattgcgaaatatttgcgtgattttctacattctgaatcgtttaaa
aaatgtgtacatcagctcaacacctcctcagtaattctacgcaaatcaggcgatcggcgt
tttgtgcattctgcattacccaacgtgggcgcagtactgctacacgaagatgggccacta
ctgattattccgcaaacgtacgctgtttatttactgtccactttgtggagtcttttggaa
cttcaaattggtcaaacccatgcgctattgatggatgctttgttgacaccgcaagtagtg
gattcctttgtacaatatatctcattgctgtctaccggcttgaactattacctcagcagc
aatttcttctccaaaattgaagtgaaattcatttataagttgctaagctgcagcaatttg
ctatcgcatttcaactcgtctcaaatattgcagctggtgtatagttacgtatgttgtctc
ggtgcggagtacatttcagaaatagaacaactttttgataggattatatttaatcctaaa
tatataaatgtgtctgagtctgcattagataaatggaagacaattttcatcggcttggct
cagtcgcactacattattgtggagccatcaaatttgagtttgtcaaaatcaacgcaaaca
agtgctattttatcacgcgattggccatactttttcttcaaaattattctacagaactac
attgacaatgcacctaacaaaataacggttgatttctcagagcgcgaagttttagaaatg
actcttaccctcgttactcagctggaagagtcgagctctaatttggaaattgcaacgcct
accgaagagctaatgtacgctatgattgcatttatgggtcccgaatctgaatttttgaca
gacaggatgcgccccctgctgcggaaacatttgctgcgattgtatgaaaaacacaggaac
tataaatttgattttgaaaaggcttccataggaaagtgcaaattcgaaagtctgtactct
ttattcgccgatcactttcaagcaaccagctacggcgacgaattattcggctccttagtt
ttggtaccaatggcgcagaagtatgacagcaaatggcgtaggcgtatgtggtcggactac
gccccggcgttatgctacctgaactgtgatgagtctttgctcattaatggcttaagatcc
tacttggagcctgtcgaagaagacacatccttaaaaaaagcgtatgcatttgctttaact
acaaacgatgtgcgtcctggcactattccttataaaattgcaaaataccacgtagaacat
tttaaagcgggttctaataagtaa
DBGET
integrated database retrieval system
