Aspergillus oryzae: AO090005001388
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Entry
AO090005001388 CDS
T01018
Name
(RefSeq) unnamed protein product; TPR repeat-containing protein
KO
K12600
superkiller protein 3
Organism
aor
Aspergillus oryzae
Pathway
aor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AO090005001388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090005001388
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
AO090005001388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_22
TPR_8
TPR_16
TPR_17
TPR_14
TPR_1
TPR_12
TPR_11
TPR_6
TPR_7
TPR_9
TPR_10
ANAPC3
TPR_MalT
TPPII_C
Coatomer_E
T7SS_EccA1_N
Inhibitor_I71
TFIIE-A_C
Motif
Other DBs
NCBI-GeneID:
5990260
NCBI-ProteinID:
XP_001818315
LinkDB
All DBs
Position
1:2743086..2747480
Genome browser
AA seq
1424 aa
AA seq
DB search
MSSKAALKAVRTALDSKDFELAAEKAKALVQQEPQNYHANVFLGLALDKLNKTKDAENAY
LAATRAKENDKIAWQGLISLYEKQGNSRLDSYREAVIKLCQILGEANDSRRCEEIVDKYI
KFTKKNGTRSQCRKALELHLPSSPIYDILEGFIPHPAHTYLRLIEMTEAEEKEFINREIG
ERRTRLGARIEQVTLEVKREAFRRSELEQLYRGIVDWSHDDEVRRTYEEKIIERGCDVLA
VLPTNEKKAKREEVWAAARDMVIIKHPFELAWRIYLEWQDIQNFSEWDRNFLEEFIEFFP
EAGLTKVLKGFLASNLSPFPKKPKDSKEKDKDTKAKEQEAEDENDETNELGVQDSVLLMV
EGLEMSGSSIVAHRILGEFYLTLEEYESVVDVSRKGLRNIQDLVKTTGMKLQKTTDCMNI
ALANALIYYQSPRNHPEAKIIFEEILKRNPKSTSCLLGIGLILKVDEDYTEAVNFLERAL
ERDPSNLKVRAELSWSKALTGDLTSGLHGLQDVLEELQNSDLENRDFKSETFYRIGYCQW
ELDPSPGARKDRNGAYANFLASIQTNINYAPAYTSLGLFYADYKRDKGRARRCFHKAFEL
SPSEIEAAERLAKAFADQKEWDLVEAVSQRVVDSGKAKPAPGSKRRGYSWPYAALGTVQI
NKQQYAKSIVSFQAALRLSPGDYHSWVGLGESYHHSGRYIAATKAFEHAQQLEDSLSNSD
KEQVWFARYMLANVKRELGEYDDAIARYEDVLSIHPNEIGVSIALLHTLTESSWKSLDLG
LFNDCIGLARKAILVATSLALERVDIFNLWKGVGDACSVFSYVKSKTARAPLNEVQKLLS
TQLESAVFDILTDVDDVGQDRLSELKNTDDEACSPSDKCMYASILAYKRAIHVSAQDIHA
QAVAWYNLGWSEYRAFRCMQVSTSTPGKRQSRKFLKAAIRCFKRAIELEAGNSEFWNALG
VATTSMSPKVAQHAFVRSLHLNDRTAQVWTNLGALYLIHNDIQLANEAFTRAQSTDPDNS
QAWIGQGFLALLFGDPREARGLFEHAFDISNSSAPLPKKQYTLSLFDHLMSDSSASNEVS
ALIQPFFALHQLSSQDPSDLPFVHLSSLLAERIGEISDAEASLRTLCTAVEAEYEVSESA
SALSRFAQANADIARVLLARHEFEEAAEKAETALMLSGEEDAEKFDPETNSKLRLSAHLT
AGLAHYYLRNMDSAIDMFRDALQEADNAPEVVCLLAQVLWAKGGEEERAVARQQLFDCVE
NNPEHVGAVTLLGAIAILDSDQDAIEAVQSDLQSMITRDDIEIHEQTKLVKLLTAMSTLG
FTDKSGVPEETRRVGEAAAAVMRSPYQPQGWMELAAASDEPYPAEMGVKRALRSVPPQGN
LDAVDLSTAYAQTGKASDALRSIMIAPWKQHGWEELNHTVSATN
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaaggcagccctgaaagcggtgcgaacagcactggactcgaaagatttcgag
cttgcggccgagaaagccaaagctcttgtgcaacaggaacctcaaaactaccacgcgaac
gtttttttagggcttgcgctcgataaactcaacaagacaaaagatgcggagaacgcctac
ctcgcagcaacccgtgcgaaagagaatgacaagatagcatggcaagggctgatcagtctg
tatgagaagcaaggaaacagcaggctagactcctatcgcgaggcggtcataaagctttgc
cagatccttggtgaagcaaatgacagtcgacgctgcgaagaaatcgtagacaaatatatt
aaatttacaaagaaaaatggcacacggtctcaatgtcgaaaggccctcgaactacatttg
ccgtcgagtcctatctacgatatcctagagggtttcatcccgcaccctgcgcatacatat
cttcgcctgatagagatgaccgaagccgaagaaaaagaattcataaacagggagatagga
gaaaggcgtacacgactgggtgcgcgcattgagcaagtcaccttggaagtgaagagggag
gccttcagacgtagcgaactcgaacagctgtatcgcggaatcgtggactggagccatgac
gatgaggtccggcgtacatatgaagagaagataatagagcggggctgcgatgttctcgcc
gttcttccgacaaacgaaaagaaggcgaagcgcgaggaggtgtgggcggcagctcgtgac
atggtcattatcaagcaccccttcgagctggcatggagaatctatcttgaatggcaagat
attcaaaacttctcagagtgggatcgcaatttcctagaggaatttatcgaattctttcca
gaagcggggcttactaaagtcctgaaaggtttcttggccagcaacctttcaccatttcca
aagaagcccaaagactccaaggagaaggacaaagatactaaggcaaaggaacaggaggcc
gaggatgaaaatgatgagaccaatgaactcggtgttcaagacagtgttctgctgatggtc
gaaggacttgaaatgtccggatcctcaattgttgcgcatcgcatcttgggtgaattttac
ttgacccttgaagagtacgagagcgttgtggatgtttctcgaaaaggacttcgcaacatt
caagatctggtcaaaacaactggaatgaagcttcaaaagacaaccgattgtatgaatatc
gctcttgcaaacgccttgatctactatcagtcgccccggaaccaccctgaggccaaaatt
atcttcgaagaaatcctaaaaagaaacccaaaatccacgagctgtctacttggaattggt
cttatcctcaaagtagacgaagattataccgaggccgtcaatttcctggagcgtgctctg
gaacgagacccatcgaacctcaaggttcgtgccgagttgtcctggagcaaggcactgaca
ggtgatcttacatccggacttcacgggctccaagatgtgcttgaagaactacaaaattcg
gatctggaaaatagagattttaaatcggaaactttttatcgtattggttattgtcagtgg
gagttggatccatcgcctggcgcacgcaaggaccgcaatggcgcctacgctaatttcctt
gcgtcaatccagaccaacataaactacgcgcccgcttacactagtctcggactattctac
gccgattacaagagggacaaaggtagggcgcgaagatgttttcacaaagcctttgagctg
tcaccatccgagattgaagcagctgaacggctcgcaaaggcatttgcagatcaaaaagag
tgggatcttgttgaagctgtgtcacagcgtgttgtggactccggaaaagctaaacctgca
ccgggctcgaaacgacggggttacagctggccgtatgctgctttgggcactgtccagatc
aacaagcaacaatatgcgaagagtatcgtctccttccaggcagctttgcgactgtcaccg
ggcgactatcattcatgggtcggcctaggagagagctaccaccattctggccgttacatt
gccgctacgaaagccttcgagcatgcccaacagttggaggactccctctccaactcagat
aaggaacaagtctggttcgcacggtacatgctggcgaatgtcaagcgggagcttggagaa
tacgacgatgctattgcgagatacgaggatgttctaagtatccatccgaatgaaatcggc
gtgtctattgcactactccatacactcacggaaagctcttggaagagccttgatctgggt
ctttttaacgactgcattggactggcccgtaaagcgattctggtagcaacatccctagcc
ctggaaagagtcgacatcttcaatctatggaagggtgtaggagatgcatgctcagtcttc
tcctatgtcaagtcgaagactgcaagagccccattaaacgaagtacagaaactactctct
acccagcttgagtctgcagttttcgacatccttacagatgtggatgacgtcggacaagat
cgtctctcggaattgaaaaatacagatgatgaggcctgcagcccatcagataaatgtatg
tacgcctcgattctggcatacaagcgcgccatccatgtgtcagcacaggacattcatgct
caggcggttgcttggtacaatcttggttggtccgaatacagggcgttcagatgtatgcaa
gtgtctacgagcacaccaggcaagaggcagtcgcggaaatttttgaaggcggcaatccga
tgcttcaaacgggccattgagctagaggctgggaactctgaattctggaacgcccttggt
gtagcgactacaagtatgagcccgaaggtagcacagcatgcctttgtcagaagtctccat
cttaacgacagaactgcgcaagtttggaccaacctgggggcactttacctgatccacaat
gacatccagcttgcaaatgaagcctttactcgtgcgcaatctacagatccagacaattcc
caagcctggattggacaaggcttccttgcccttctatttggtgacccgcgggaagccagg
ggtctgtttgagcacgcctttgatatctccaactcgtcagccccattgcctaagaagcag
tacacgttaagcttgttcgatcatcttatgtcagactcttcggcttcgaacgaggtttca
gcgctgattcaaccgttctttgcacttcaccagctctcttcgcaggacccatccgattta
cccttcgtgcatctatcctctcttttggctgagagaattggcgaaatatcagacgcagaa
gccagtctacggaccctctgtaccgctgtagaggcagaatacgaggtgtccgagtcagcg
tcggccctctctcgattcgcccaggcaaacgcggatattgctcgtgtactccttgcacgt
catgaattcgaggaagctgctgaaaaggcagagacagcgctcatgctatcaggggaagaa
gatgccgagaagttcgatcctgaaacgaacagcaagcttcgcttgtcagcccacttgaca
gcgggcctggcgcattattatctacggaacatggacagtgcgattgatatgttccgtgac
gctctccaggaagcggacaacgcgcctgaagtggtatgtcttctcgcacaagtgctatgg
gctaaaggtggcgaggaggaacgggccgtggctcgccaacagctatttgactgtgttgag
aacaaccccgaacatgtcggggctgtcaccttactgggtgccattgcgatccttgattcc
gaccaggacgccattgaggccgtccaatctgacttgcagagcatgatcacgagagacgat
attgagattcacgaacagactaagttggtcaagcttttaacagccatgtctaccttagga
ttcaccgataagtctggggttcccgaggagacaagacgtgttggggaagctgcggcagcc
gtgatgagatcaccttatcagcctcaaggttggatggaattagcagcagcctccgatgaa
ccctatcccgcggagatgggcgtcaagagagctttgcgtagcgttccaccccagggcaac
cttgacgcagttgacctgtctaccgcatatgcacaaaccggaaaggcgagtgatgcgctc
cggtcgattatgattgcaccatggaaacagcatgggtgggaagaactaaatcacacggtg
tctgcaacaaactaa
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integrated database retrieval system
