Aspergillus oryzae: AO090012001002
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Entry
AO090012001002 CDS
T01018
Name
(RefSeq) unnamed protein product; mRNA cleavage and polyadenylation factor I/II complex, subunit Pcf11
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
aor
Aspergillus oryzae
Pathway
aor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AO090012001002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aor03021
]
AO090012001002
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090012001002
Transcription machinery [BR:
aor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AO090012001002
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
AO090012001002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CFIA_Pcf11
VHS
Sema4F_C
Zn_ribbon_recom
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
5988406
NCBI-ProteinID:
XP_001727932
UniProt:
Q2UBH2
LinkDB
All DBs
Position
4:2592716..2595033
Genome browser
AA seq
657 aa
AA seq
DB search
MSSGLASDEVAEDYKNSLEDLTTNDRFQISNLTVIAKENTEHAMAISRVLENHIRTTPPA
QKLPALYVVDSIVKNVGTPYTLFLGRNMYQTFMNAYTLVDSPTRRKLDEMLKTWKEPVPG
SLDTRPVFPPEVTRSIESALIKARTAALQQQQARSQQEILPRGRVGTPPGWGSNSAAAQS
STRYPPSTNSTPPMLYNRNGSSHGFPSADPRSTPTPQLQQQQQHQQQQDVDLSALNRDIE
ALIATARSDFANNPLVPSVQQRLKALLDLQGILQRQELTQEQLKLVRDQVSALSPKPPIS
VSSSLPPAIPAVSTPSMAMPPVQAISQPLQQLLNPGTLAELIKTTAARQQPTPPPPPQAP
SILSQAPSSVTSQPTVTLTPENPLIAALRARGLLPPASAPPTTSATPSSSLVSVFPFIVP
GQVRFTPPVPTSQVADTSNVQISVQMNTASIKIPRNAFIATLYESKPNRCGTCGRRFSAT
EDGKGKKARHLDWHFRTNQRMAEAARRAQNRSWYVDERDWIKSREVGDDEGLVDTETSGE
AVNGGDGGSAKKAPPKQWIRAPNDATLRNTPCPICQEKFESTWSEDVQDWIWQDAVKVGN
RVYHASCYAEVAKDGSTPARRGTPSGRTETPDSVLGKRKAEGTDSPGQNARVKLELM
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaggactggcctccgacgaagtcgctgaggattacaagaactcattggaagat
ctaacaacgaacgacaggttccagatcagcaacctaacggtcatagcgaaggagaacacc
gagcatgccatggccatctcccgagtcttggagaaccacattcgaacaacgccgccggcc
cagaagttgcccgccttgtatgtagtcgattcaattgtcaaaaatgtggggacaccctac
acgctttttctgggtcgcaatatgtaccagacattcatgaatgcctataccttggtcgac
tcgccaactcgcagaaaactggacgagatgctcaaaacctggaaggagccggtccccggt
tctctggacacgaggccagtctttcctccggaagttactcgcagcatcgaaagtgcgctc
atcaaggcgaggacagccgccctgcagcagcagcaggcgaggagccaacaggaaatcctt
cctcgcgggcgggttgggacacccccaggctggggaagtaacagcgctgcagctcagagt
tctactcgttacccaccatccacaaattcaacgccacctatgctatataacaggaatgga
tccagccatgggtttccttcggcagacccgcgatcaactccaacgcctcaacttcagcaa
cagcaacagcatcagcaacagcaggatgtggatctctcagctttgaatcgggatatagag
gctttaatcgcaactgctcgaagcgatttcgcgaataatccccttgttccttccgtacag
caacggctcaaggctcttctagacctccagggtatcttgcagcgtcaggaacttacccag
gagcaattaaagcttgtacgcgatcaggtttctgcgctttccccaaagcccccaatttca
gtttcctcgagtcttccccctgctattccagcggtgtcaacgccatcgatggcaatgcct
cccgtgcaagccatttctcagccccttcagcagcttctaaaccctgggacacttgctgag
cttatcaaaactactgctgcgcgccagcagcctacgcctccgcctccgcctcaggctccg
agtatcttatcacaagcacctagcagtgtgacatcgcagccaactgttactttgacccca
gagaacccactcattgcagcgctcagagcacggggtcttttaccccctgcttctgcacct
ccgacgacgtccgctacgccttcctcaagcctcgtttcggtctttcctttcattgtacct
ggccaagtgcgatttacacctcctgtgccaacgtctcaagtggccgatacttcgaatgta
caaatcagtgttcaaatgaacacggcgtctatcaaaataccacgaaatgccttcatagct
acactttatgagtcaaagcccaatcgttgtgggacttgtgggcgtcgattttctgcaaca
gaggatgggaaaggaaagaaagcgcgccatctagactggcatttccgaactaaccagcgg
atggcggaggcagccaggcgggcccaaaaccgcagttggtatgttgacgaacgggattgg
atcaaatcccgagaggtcggcgatgatgaaggccttgtagacacagaaacatccggtgag
gctgtaaatggaggcgatggtggttctgcgaagaaagcaccgcccaagcaatggatacgt
gccccgaacgatgccacccttcgtaatactccctgtcctatttgccaggagaagttcgag
tcgacatggtctgaggatgtccaggactggatatggcaagatgccgtcaaggtcgggaat
cgcgtgtaccatgctagctgttatgcagaggtggctaaagacggttccacgccagcacgc
cgaggtactccatcagggcgtactgaaactccagactccgtattgggcaaacgcaaggct
gagggaactgattctcctggccaaaatgcccgggtcaagttggagctaatgtaa
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