Aspergillus oryzae: AO090120000322
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Entry
AO090120000322 CDS
T01018
Name
(RefSeq) unnamed protein product; ATP-dependent DNA ligase IV
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
aor
Aspergillus oryzae
Pathway
aor03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AO090120000322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aor03400
]
AO090120000322
Enzymes [BR:
aor01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AO090120000322
DNA repair and recombination proteins [BR:
aor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
AO090120000322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
DNA_ligase_A_C
RNA_ligase
LIG3_BRCT
DNA_ligase_IV
PTCB-BRCT
mRNA_cap_enzyme
Clr5
Motif
Other DBs
NCBI-GeneID:
5996306
NCBI-ProteinID:
XP_023092498
LinkDB
All DBs
Position
5:complement(3538992..3542354)
Genome browser
AA seq
1006 aa
AA seq
DB search
MDSDDDYNGPADTNPRLEDEESDLDEKYPNRPRNHSTTLPFHVLFQTLFYPLSEIKKKPA
GPARKKVGPHGLSSVNLTPLEKRRDIIDRFISRWRKEVGDDIYPAFRLILPDKDRDRAMY
GMKEKAIGKLLIRIMKIDKNSEDALNLLNWKLPGQTTTSSMAGDFAGRCFGVLSKRPMRT
EVGDMTIEEVNEKLDHLSAASKENQQLPILTEFYRRMNPEELMWLIRIILRQMKVGATER
TFFDVFHPDAENLYSISSSLRRVCWELHDPNIRLEAEDRGITLMQCFQPQLAQFQMHSLD
RMISRMRLTEDDPVFWIEEKLDGERMQLHMDSNDSVPGGRTFRFWSRKAKDYTYLYGNGI
QDENGALTRYLSDAFADGVESLILDGEMITWDTEQDAIAPFGTLKTAALSEQRNPYSSTT
RPLFRIFDILYLNGRDLTRYTLRDRRNALQKSIKPVYRRFEIHPYEEATGKTEIEEALRR
VVEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYYGSGHRGGGL
SSFLCGLRVDDAHSSQGMVASKCYSFCKVGGGFTAADYANIRHHTDGKWHEWKSRKPPTT
YIELAGGDAQYERPDMWIKPEDSVVLCVKAASVAVSDQFRIGLTLRFPRFKKLRMDKDWK
SALSVQEFLDLKANAERERKEKEFNVDNSRKKRAKRDNKKPLAIVGYSAEAEAQYTGPSG
NIFEGLNFYITTDSNTPVKKSKAELEQLVKANGGKFFQTSNAAPSTICIADRRTVKAASL
QKSGNVNIIRPSWILDCIRQSEIDAGLPDSLLPLEPRHVFFATQDKKEEIAASVDRFNDS
YARNTTNDELKEILKQMSKDHHFHASQNPKIVRKLNERIQEKVNAGWEMPSGWLFKGLTI
LFPQNDKVDDAEVDETSQTHQQYRLNLARNTVRFAGANVVDSKSSSVTHIVVAPGSSSSD
VSSIRKSHSAKPGKKVPHLVTAEWIEECWKQRTLLGEEGFQPSRGT
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggattctgacgacgattacaatggccctgccgataccaatcctcgcttagaagatgag
gagtctgacctagatgaaaaatatcccaaccgcccacgaaatcattccactactttaccg
tttcatgttttgttccagacgcttttctatccattgagtgagatcaaaaagaagccagct
ggacctgcgcgcaagaaggtcggccctcatggactgtctagcgttaatctaactccattg
gaaaaacggcgagatattatcgaccgcttcatctcaagatggaggaaggaggtcggggac
gacatataccccgcttttcgattgattcttcccgacaaagatcgggatagggcaatgtac
ggaatgaaggagaaggctatcgggaagcttctaatccgaattatgaaaatcgataagaat
tcggaggatgctctcaatctcttaaactggaaattgcccggacaaacgactacgtctagt
atggctggtgatttcgcaggccgatgcttcggtgtactctcaaagcggccaatgcgcacg
gaagtgggtgatatgaccatcgaggaagtgaatgagaaactcgatcatttatccgcggcg
tctaaggaaaatcaacagttgccgatcttgacggaattctaccgacgaatgaacccagaa
gagctcatgtggcttatccgtatcatcctacgacagatgaaggttggagcgacggagcgc
accttctttgatgtgttccatccagacgcggagaatctgtacagcatttcgagtagtctt
cggcgcgtctgttgggaactgcacgatcctaatatccggcttgaggctgaagatagaggg
atcacgttgatgcaatgtttccaaccgcagctggctcaatttcagatgcactcactggat
cggatgattagccggatgaggctgacggaagatgatccggttttctggattgaggaaaaa
cttgatggggagcgtatgcagcttcatatggattcgaacgactcggtaccagggggtaga
acgtttcgcttctggtcaagaaaagccaaggactacacatatctctatgggaatggcatc
caagatgagaatggtgctttgacaagatacctcagcgatgcgtttgcagatggagtggag
agcttgattctggatggcgaaatgattacttgggatactgaacaggatgccattgccccc
tttggcacgcttaagacggccgcactatccgaacagagaaacccgtactcgagcactacc
cggcccttgttccgtatctttgacatactgtatttgaacggacgcgatctgacaaggtac
actcttcgtgaccgccgaaacgcattgcagaaaagtatcaaacctgtttatcgcaggttt
gaaatccacccttacgaagaagctacgggcaaaactgagatcgaggaagccctgcgaaga
gtcgtggaagaggcttccgagggcttggtacttaagaatcccaggtcaccctatcgcctg
aatgaaagacacgatgattggatgaaggttaagccggaatatatgactgagttcggagag
tcgttggatgtcgtcgtgattggagggtattatggatctggtcatcggggtggtggcctt
tcaagcttcttatgtgggttaagggtcgatgatgctcattcctcacaaggaatggtggca
tctaagtgttattcgttctgcaaggtaggaggaggctttactgcagctgattatgcaaac
atccggcaccacacggacggtaaatggcacgagtggaaatccaggaaacctcccacgaca
tacatagaactggcaggcggagatgcgcagtacgagcgcccagacatgtggataaaacca
gaagactcggtggttctctgcgttaaggcagcttcagtagctgtcagtgatcagtttcgt
atcggactgacgctacgctttccgcgcttcaaaaagctgcgtatggacaaagattggaaa
agcgctctctcagtacaagagttcctcgacttaaaagccaatgcggaacgagagcgtaaa
gagaaagaattcaatgtggataattcacgcaagaaacgggcgaagagggataacaagaag
cctttagctattgtcgggtacagtgcggaagcagaagctcagtacaccgggccatctggc
aatatcttcgaagggctaaatttctacattacaaccgactcaaacacaccggtcaaaaag
tcaaaggcggagttagaacagctcgtgaaggctaatgggggcaagttctttcagacgagt
aatgctgctccgagcacaatttgtatcgccgacagaaggactgtgaaagctgcgtccctt
caaaaaagcggcaatgtcaatattatccggccttcttggatccttgattgtattaggcag
agtgaaatagacgcgggtttgcctgattctcttcttcctctcgaacccagacatgtcttc
ttcgcgactcaggacaagaaggaggagattgcagcgagcgtcgatcggttcaatgatagt
tatgcccgcaacaccaccaatgacgaactgaaggagatcttaaagcagatgagcaaggat
catcactttcacgcttcgcagaatcccaaaatcgtccgaaaactcaacgagcgtatccag
gagaaagtcaatgccggatgggagatgccttccggctggctgttcaagggtctgaccatc
ctctttcctcagaatgacaaagtggatgatgcagaagtagacgagacgtcacaaacgcat
cagcaataccgtcttaatctagcacgcaacactgtacggtttgcgggagcgaatgttgtg
gattcgaaatcttcgtcggtaactcacatcgtcgtagctccgggcagctcatcttcagac
gtctcttcgatccgcaaatcgcactcagcgaaaccgggaaagaaggtgccacacctcgtc
actgccgaatggatagaggagtgctggaaacagcggacgctgttgggcgaagaggggttc
cagccgtccagaggtacctaa
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