Amycolatopsis orientalis: SD37_22525 Help Entry SD37_22525        CDS       T06703                                  Name (GenBank) DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism aori  Amycolatopsis orientalis Pathway aori03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:aori00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     SD37_22525  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:aori03400]     SD37_22525 Enzymes [BR:aori01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      SD37_22525 DNA repair and recombination proteins [BR:aori03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      SD37_22525 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_N DNA_ligase_A_C DNA_ligase_A_M Motif Other DBs NCBI-ProteinID:  ANN21952 UniProt:  A0A193CBU7 LinkDB All DBs Position 5146568..5148007 Genome browser AA seq 479 aa AA seqDB search MAEKLGEYRRKRKPERTPEPIPDGDGETGSNDLFVIQEHHASSLHWDVRLERDGVLVSWA VPKGLPMSPETERLAVHTEDHPMEYLTFEGEIPVGEYGGGSMTIWDTGRYETLHFNDHKV EIVFHGERARGKYLFLNVKKDGNDRGWLLKRLDPAEPGRAELPPFLAPMLTKPGRLPSTG EDAEWAYEFDWSGRRTLIRVSGGRITAYDDSGDDVTGLYPEFRGLGEQLGATEAFLDGEI VVFDGGKPSVDGLGHRARATKSSAKRLTARYPAFYLVNDLLHLDGRSCVEASYVERRELL DGLGLAGPHWQVPRHYLGDGGAVARAAREHGLAGIVAKRADSAYHPGKRTGEWLSITGAR VQQVVLGGWRPGGGSRAGTFSSLLLGVPHEDGLRYIGNVGVGFAGDELEELSRRLFRLER KTSPFHSVPDKQAKDAHWSRPTIVGEVVFGGWTDAGCLRNPRWRGLLPDVTADEVVLDG NT seq 1440 nt NT seq  +upstreamnt  +downstreamnt atggcggagaaactcggcgaataccgccgtaagcgcaaaccggagcggacccccgaaccc attccggacggagacggcgaaaccgggtcgaacgacctcttcgtcatccaggaacaccac gcgagcagcctgcactgggacgtccgcctcgaacgcgacggtgtcctggtctcctgggcg gtgccgaaaggcctgccgatgtcgcccgaaaccgaacggctggccgtgcacaccgaggac catccgatggaatatctcaccttcgagggcgagatccccgtcggcgaatacggcggcggc agcatgacgatctgggacaccggccggtacgagacgctgcacttcaacgaccacaaggtc gagatcgtcttccacggcgaacgggcacgcgggaaatacctcttcctcaatgtgaagaag gacgggaacgatcgcggctggctgctcaaacggctggaccccgccgaacccggccgggcg gaacttccccctttcctcgccccgatgctgacgaaacccggccgtctcccctcgaccggc gaagacgcggaatgggcttacgaattcgactggtccgggcgccgcaccctcatccgggtg tccggcggccgcatcaccgcctacgacgattccggtgacgacgtgaccgggctgtacccc gagttccgcggcctcggcgagcaactcggtgccaccgaagcctttctcgacggggaaatc gtcgtcttcgacggcgggaagccgagtgtggacgggctcgggcatcgcgcgcgggccacg aagagttccgcgaaacggctcaccgcccgatatccggcgttctacctggtgaacgatctc ctgcacctggacggccgttcctgcgtcgaagcgtcctatgtcgagcggcgggaactcctc gacggactcggcctcgccggacctcattggcaggtcccccggcactacctcggggacggc ggcgcggtcgcgcgggcggcccgcgaacacggactcgccgggatcgtcgcgaaacgcgcc gactccgcctatcacccggggaagcgcaccggggaatggctttccatcaccggagcccgg gtccagcaagtggtgctgggcggctggcggccgggaggcggcagccgagcaggcacgttc agctcgctcctgctcggcgtcccgcacgaagacggcttgcggtacatcggaaacgtcggc gtcggattcgcgggcgacgagctggaggaactctcccggcggctgttccgcttggagcgc aagacatccccgttccactccgtcccggacaaacaggcgaaggacgcgcactggtcacgg ccgaccatcgtcggcgaggtcgtcttcggcggctggaccgacgcgggttgcctgcggaac ccgcgctggcgcggcctgctgccggacgtcaccgccgacgaggtcgtactcgacggctga

DBGET integrated database retrieval system