Amycolatopsis orientalis: SD37_35575
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Entry
SD37_35575 CDS
T06703
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aori
Amycolatopsis orientalis
Pathway
aori03420
Nucleotide excision repair
aori03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aori00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SD37_35575
03430 Mismatch repair
SD37_35575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aori03400
]
SD37_35575
Enzymes [BR:
aori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD37_35575
DNA repair and recombination proteins [BR:
aori03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD37_35575
MMR (mismatch excision repair)
Other MMR factors
SD37_35575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
ANN22263
UniProt:
A0A193CD33
LinkDB
All DBs
Position
complement(8214197..8217475)
Genome browser
AA seq
1092 aa
AA seq
DB search
MISELQRRQVEPGEIARALGLHSPTDEQAEVIAAPVEPSLVVAGAGAGKTETMAARVVWL
VANSVVPPERVLGLTFTRKAARQLGERVRTRLRRLVGSGLLDKIDPTGDLRMTVTAGEPT
VLTYHAYAGRLLSEHGLRLPVQPGVRLLSETSSWQFSHRVVSTWDNDLDTDRVPSTVTAQ
LLALAGELGEHLVETERLAQYTSWLCDVIENAPRAKGQRAALPQKLAEVMTAQRFRLALL
PLVEAYHARKRAEGALDFADQMSLAAQLASSYPAVVAGERERYGAVLLDEYQDTGHAQRI
LLRSLFGGVEHPPMPVTAVGDPAQAIYGWRGASAANLPRFTTDFPRDNGERLVPALDFGL
LTSFRNPPEVLELANAISEPLRERGLGVARLRALEGAGTADIAAALQPDVRAEREWVADA
VAKRWFETLEETGKPPTAAVLVRRRADMAPIAAEMRARGLPVEVVGLGGLLDEPEVADLV
STLRVLADPLAGSAAARLLTGARWRIAAADLAALWRRAGELSSPEQSSGKSDVDEPVLVT
ERVEQAGLIDAIDDPGTPERYSTEGFRRIQRIGRELSALRRRLDQSLPELVADVERTMLL
DVESLARPGPAGRAHLDAFADVVTDFAETSPTATLLSFVDYLNTAAHAEDGLTPGEVEVV
PDRVQVLTVHSAKGLEWRIVAVPHLVKEVFPGRRRSSSWLRTSTSLPAALRGDSEDLPEL
RISEGSDRKEVQEALELHEEGFVAREADEERRLCYVALTRSEHTLIVSGHWWNESSARPK
GPSEFLLEIGEVMRENSVGRIECWAEEPEGDEENPLVADSRRSRWPVDPLWPRREGVADG
VDLVLGAMEAAKDTEATEDTEDTEEEDDPDGWISDTKVLLEERARAQNRVQQVVLPPHLS
VSQLVELSADPAGLARRLRRPLPVRPNTYARRGTAFHGWLEQRFGGEQLLEIDDLPGAAD
VDEAPDTELEALRTAFEKSEWANRVPHAVEVPFSADVVGVTVRGRMDAVFADPDGGWTVV
DWKTGAVPEEGRLASLAVQLAAYRLAWAALKKIPVEKVRAAFHYVKHDKTVRPADLLDAE
GLRNLLRRVPTI
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
ttgatctccgaactccagcgccgtcaggtcgaaccgggcgagatcgcccgcgcgctcggc
ctgcacagcccgaccgacgaacaggccgaggtcatcgccgcacccgtcgagccttcgctg
gtggtcgcgggggcgggcgcgggcaagaccgagacgatggccgcgcgcgtggtgtggctg
gtggccaacagtgtcgtgccgccggaacgcgtcctcggcctgaccttcacccgcaaggcc
gcccgccagctcggggagcgcgtccgcacccggctgcgccgcctggtcggatcggggctg
ctcgacaagatcgacccgaccggcgacctgcgcatgacggtgaccgccggggagccgacg
gtgctcacctaccacgcgtacgccgggcgcctgctgtccgaacatgggctgaggttgccg
gtgcagcccggggtgcggttgctgtcggagacgtcttcgtggcagttctcgcaccgggtc
gtgtccacttgggacaatgatctcgacaccgatcgcgtgccctccacggtgaccgcgcag
ttgctggcgctggccggggaactcggcgagcacctggtggagaccgaacggctggcgcag
tacacgtcgtggctgtgcgacgtcatcgagaacgcgccgcgggccaaggggcagcgcgcc
gcgctcccgcagaagctggccgaagtcatgacggcgcaacggttccggctcgcgctcctg
ccgctggtcgaggcgtaccacgcgcggaagcgggccgagggcgcactcgacttcgccgat
cagatgtcgctggccgcgcagctcgccagcagctatccggcggtggtcgcgggggagcga
gaacggtacggcgcggtgctgctcgacgagtaccaggacaccgggcacgcccagcggatc
ctgctgcggtcgttgttcggcggcgtcgagcatccgccgatgccggtgacggcggtgggt
gacccggcgcaggccatctacggctggcgcggggcgagcgcggccaacctgccgcggttc
accaccgacttcccgagggacaacggggagcggctcgtcccggcactggatttcggtctg
ctgaccagtttccgcaacccgccggaggtgctggaactcgccaacgcgatctcggaaccg
ttgcgggagcggggtctcggcgtcgcgcggctgcgggcgctggaaggcgccgggacggcg
gacatcgccgccgcgcttcagccggacgtccgcgccgaacgcgaatgggtcgccgacgcg
gtggcgaagcgctggttcgaaaccctggaggagaccgggaaaccgcccacggcggcggtg
ctggtccggcgccgcgcggatatggcgccgatcgcggcggagatgcgggcgcgcgggctg
ccggtggaggtcgtcggcctcggcggactgctcgacgagcccgaggtcgcggacctggtc
agcacgttgcgggtgctcgcagatccgctcgcgggcagtgcggccgcccggttgctgacc
ggggcgcgctggcggatcgcggcggccgacctcgcggcgttgtggcggcgcgcgggtgag
ctctcctcgccggagcagtcgtccgggaagtccgatgtggacgaaccggtgctggtgacc
gagcgcgtcgagcaggcggggctgatcgacgccatcgacgaccccggtacgccggaacgg
tattcgacggaggggttccggcgtatccagcggatcggcagggagttgtcggcgttgcgc
cgacgcctcgaccagtcgctgcccgaactggtcgccgacgtggaacgcacgatgctgctc
gacgtcgagtcgctggcccgtcccggccctgccgggcgcgcgcacctggacgctttcgcc
gacgtcgtcacggatttcgccgaaacctcgccgacggcgacgctgttgtcctttgtggac
tatttgaacaccgccgcgcacgcggaggacgggctcaccccgggcgaggtggaggtggtc
ccggaccgggtccaggtgctgacggtgcactcggccaaggggctggaatggcgcatcgtc
gcggtcccgcatctggtgaaggaggtctttcccggcaggcggcgttcgtcgtcgtggctg
cggacgtcgacctcgcttccggccgcgctgcgcggtgactcggaggatctgccggagctg
cggatctccgaggggtctgaccgcaaggaagtccaggaagcgctggagctgcacgaagaa
gggttcgtggcgcgggaggcggatgaggagcggcggctctgttatgtcgcgctgactcgc
tccgagcacacgctgatcgtttccgggcactggtggaacgagagcagcgcgcggccgaag
ggcccttcggagttcctgctcgaaatcggcgaggtgatgcgggagaactccgtcggccgg
atcgagtgctgggccgaggagccggagggcgacgaagagaatccgctggtcgccgactca
cgccggtcgcggtggccggtcgatccgctgtggccgcggcgtgagggcgtcgcggacggt
gtcgatctggtgctcggtgccatggaggccgcgaaggacaccgaggccacagaagacaca
gaggacaccgaggaagaagacgatccggacggctggatctccgacaccaaggtgctgctg
gaggagcgcgcgcgggcgcagaaccgcgtccagcaggtcgtcctgccgccgcacctttcg
gtgagtcagctggtcgaactgtcggccgatccggccgggctggccagacggctgcggcgc
ccgcttccggtgcgtcccaacacttacgcgcgccgggggacggcgttccacgggtggctg
gagcagcggttcggcggcgagcagctgctggagatcgacgacctgcccggcgcggcggac
gtcgacgaggcgcccgacaccgagctggaggcgctgcggacggcgttcgagaagagcgag
tgggcgaacagggtgccgcacgcggtcgaggtgccgttctcggccgacgtcgtcggcgtg
accgtgcgcgggcggatggacgcggtcttcgccgatcccgacggcggctggaccgtcgtc
gactggaagaccggtgccgtgccggaagagggacggctcgcttcgctggccgtgcagctg
gcggcgtaccggctggcgtgggcggcgctgaagaagatccccgtggagaaggtgcgggcg
gcgttccactatgtgaaacacgacaaaaccgtccgcccggccgacctgctggacgccgaa
ggcctgcgaaacctcctgcgacgcgtccccacgatctag
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