Aeribacillus pallidus: AP3564_15965
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Entry
AP3564_15965 CDS
T04993
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
apak
Aeribacillus pallidus
Pathway
apak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AP3564_15965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apak03019
]
AP3564_15965
03016 Transfer RNA biogenesis [BR:
apak03016
]
AP3564_15965
Enzymes [BR:
apak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AP3564_15965
Messenger RNA biogenesis [BR:
apak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AP3564_15965
Transfer RNA biogenesis [BR:
apak03016
]
Prokaryotic type
tRNA degradation factors
AP3564_15965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
S1_2
Motif
Other DBs
NCBI-ProteinID:
ASS91513
UniProt:
A0A165YZV4
LinkDB
All DBs
Position
complement(3329613..3331724)
Genome browser
AA seq
703 aa
AA seq
DB search
MDQEKHVFSIDWSGRKLTVEIGQLAKQANGAVLVRYGDTVVLCTATASKEAKGVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFPEGFRNEVQVVSMVMSV
DQDCSSEMAAMFGSSLALSISDIPFEGPIAGVTVGRLDDQFIINPTVEQLEKSDIHLIVA
GTKDAINMVEAGANEVPEETILEAIMFGHEEIKRLIAFQEEIVEKIGKEKMEVELYKIDE
ELEKRVREMALADLLQAIQVPEKHAREDAINEVKEKTVAIFEEEEADEETIKQVKEILHK
LVKEEVRRLITEEKVRPDGRKIDEIRPLSSSVGILPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGVEESKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVIPSER
DFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKSPVAGIAMGLVKSGDNYTVLT
DIQGMEDALGDMDFKVAGTEKGVTALQMDIKIKGLSREILEEALKQARKGRLEILKSMLA
TISEPRKQLSPYAPKILTMVINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIYISS
VDEGMNKKAKKIIEDIVREIEVGQMYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERV
GKVEDVVSVGDEILVKVMEIDKQGRVNLSRKAVLRDQKEQQKS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagagaaacatgttttttccatagattggtccggacggaagctgactgttgaa
atcggccagctggcgaagcaagcgaacggcgccgttttagtccgctatggagatacggtc
gttttatgtacggcaaccgcttcgaaggaagcaaaaggagtggatttctttcccctaacg
gtcaattatgaagaaaggctttatgctgtcggtaaaatcccgggagggtttattaaacga
gagggtagaccgagtgaaaaagctattttagcgagccgtttaatcgatagaccgattcgc
ccgctgtttccagaagggtttcgcaatgaggttcaagtagtcagcatggtgatgagcgtc
gaccaagattgttcttccgaaatggcggctatgtttggatcttcgctcgcgctgtcaata
tcggacattccgtttgaaggtccgattgccggagtcacggtcggccgccttgatgaccag
tttatcattaatccaactgtcgaacagcttgagaaaagcgatatccatttaatcgtagcc
ggcacgaaagatgccatcaacatggtggaagcaggagccaatgaagtgcctgaagaaacg
attttagaagcaatcatgtttggccatgaagaaatcaaacgtttgattgcattccaagaa
gagattgtagaaaaaatcggaaaagaaaaaatggaagtggaattatataaaatcgatgaa
gagcttgaaaaaagagttcgtgaaatggctcttgccgacttattgcaagccatccaagtg
cctgaaaaacacgcccgcgaagatgctattaatgaagtgaaagagaagactgtcgcaata
tttgaggaagaagaagcagatgaagaaacgattaagcaagtaaaagaaattttgcacaag
ctcgtgaaagaggaagtgcgccgtctcattacagaagaaaaagtgagacctgacggacga
aaaattgacgaaatccgtccattatcgtcttccgtcggaattttgccgcgcacgcacggt
tcaggtcttttcacccgcggccaaacacaagccctgtctatttgtacgctcggagcttta
ggagacgtacaaatacttgacggactcggcgtggaagaatcaaagcggttcatgcatcac
tacaacttcccgccatttagtgtcggggaaaccggtccgatgaggggtcctggcagacgg
gaaattggtcatggagcattgggagaaagagcgcttgagccagtcataccttccgagcgc
gattttccgtacacaattcgtctcgtttcagaagtgcttgaatcaaatggttcaacttca
caagcgagcatttgtgcaagcaccttagcgatgatggatgccggcgtgccgattaagtcc
cctgttgctggaattgcaatgggacttgtaaaatctggtgacaactatacggttttaaca
gatattcaaggcatggaagatgcgcttggagatatggactttaaagtcgctggtacagaa
aaaggcgtcactgcgctgcaaatggacattaaaattaaaggcttgtcccgtgaaatttta
gaagaagcgttaaaacaagctcgcaaaggccgccttgaaattttgaaatcgatgctggcg
acaatctctgaaccgagaaaacaattatcgccatatgctccaaaaattttaaccatggtc
atcaatccggataaaattcgtgacgtgattggacctagcggaaaacaaattaacaaaatc
attgaagaaacaggagtaaaaatcgatattgaacaagatggcacaatctacatttcttcc
gtagacgaaggaatgaataaaaaagcgaagaaaattattgaagatattgtaagagaaatt
gaagtcggacaaatgtatttaggaaaagttaaacggatcgagaaattcggcgcattcgtg
gaactgtttaacggaaaagatggtcttgtccacatttctgagcttgcagaagagcgggta
ggaaaagtggaggatgttgtgtcagtcggtgatgaaattttagtcaaagtgatggaaatc
gataaacaaggtcgtgtcaatttatcaagaaaggccgttttaagggaccaaaaagagcag
caaaagtcttga
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