Andrographis paniculata: 127241966
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Entry
127241966 CDS
T08689
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
apan
Andrographis paniculata
Pathway
apan03022
Basal transcription factors
apan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127241966
09124 Replication and repair
03420 Nucleotide excision repair
127241966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127241966
03400 DNA repair and recombination proteins [BR:
apan03400
]
127241966
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127241966
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127241966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
LinB-like_C
Motif
Other DBs
NCBI-GeneID:
127241966
NCBI-ProteinID:
XP_051117222
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MPQVRIVAKNFMDMVASLPAVKLDKLYDNSFICEAILRSLPPLAKKYVLQLLYIDGPVTA
KWLEEWVLSDGVSKHKVAIDRLIQLRILTETVERKKEATYLFNPTFQQNLQRHIVHGGVL
PREPMPSNVTARLPSLDDLDAYAAQQWEMFLLHLINSAEAERSTNISSSMMKIFQRGLLN
QKDDRDSLKLTESGFQFLLMDTNAQLWYIVREYITNCEDHGVDTADLISFLLELSFHVTG
QAYSLNTLSDIQKNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSISLADTSSRKQGFV
VVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYKAFQNGITSEQIVSF
LQQNAHPRVAEKMPCVPENVTDQIRLWEADLNRIEMTPAHLYDEFPSRDVFEAACDFARE
YGGLLWENSKKMRIVVKAEILAQMKEFLRKQRQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggtgaggattgtggcgaaaaactttatggacatggtggcatcattgccagca
gtgaagctcgacaagctctacgataattctttcatctgcgaggctatactcagatctttg
cctccattggcaaagaaatatgtgctacagctattatacattgatggtccagtgacagca
aagtggttggaagaatgggttctttcagatggtgtctcaaagcacaaagtagcaatagat
agattgattcagctgagaatcctgactgaaactgttgaacggaagaaggaagctacatat
ctatttaatccaacctttcagcaaaatctccagagacacatagtgcacggtggagtttta
ccaagagaaccaatgccttctaatgtcacagcaaggcttcctagcttggatgatttggat
gcctatgctgctcaacaatgggagatgtttcttctgcacctcattaattctgccgaagcg
gaaaggtcaacaaacataagctcttccatgatgaaaatatttcagcgtggtctcttgaat
caaaaagacgacagggactctctaaaattgacagagagtggcttccagtttctgctgatg
gacacaaatgcacaactttggtacatagtcagagaatatataaccaactgtgaggatcat
ggtgtggatactgctgatctgatatcgtttctactggaactcagttttcatgttaccggc
caggcatatagcttaaacaccttgtccgatatacagaagaacataataaaggacctggct
gatttggggttggtcaaactccaacagggcaggaaagagagttggtttattccaactaaa
ttagctaccaatctctccattagcttggcagatacgtcatcaagaaaacagggatttgtt
gttgtggaaacaaactttcggatgtatgcatattccacatctaaattgcattgtgagatt
ttacgtctcttctcaaggattgagtaccagcttcctaacctcatcgttggagcaattacg
aaagaaagcttgtacaaagcatttcaaaacggcattacatccgagcagatagtatctttt
cttcagcagaatgctcatcctcgagttgccgaaaaaatgccatgtgtcccagaaaacgtt
acggatcagattaggttgtgggaagctgatctgaacagaatcgagatgacgcctgcacat
ctgtacgatgaatttccatcgagggacgtgtttgaggctgcttgtgactttgcgcgtgaa
tacggaggtctgttatgggaaaactcgaagaaaatgcgcattgtcgtgaaagcagaaatt
ttggcgcagatgaaagaattcctccggaagcagagacaataa
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integrated database retrieval system
