Andrographis paniculata: 127264779
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Entry
127264779 CDS
T08689
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
apan
Andrographis paniculata
Pathway
apan03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
127264779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apan03400
]
127264779
Enzymes [BR:
apan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
127264779
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
127264779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
DNA_ligase_A_C
PTCB-BRCT
DNA_ligase_IV
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
127264779
NCBI-ProteinID:
XP_051150256
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MASATKFSVMVSLFNWMQKSKSSSVKRSKFRKFLDTFCRPNNADDYFAAIRLVLPALDRE
RGSYGLREHVLATCLIDAVGMSRDSPDAQRLLNWRKGGPKSGAFAGNFSLIAAEVLQRRQ
GLTSGGMTIKELNDLLDRLASSENRSEKTSILSDLMRKTNAQEMKWIIMIILKDLKLGIS
EKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKAVRPQLALRVSNAAT
AWKKLHGKEVVVECKFDGDRIQIHKNGTQINFFSRNFLDHQEYEPGMSHIIRENVLVDRC
ILDGEMLVWDASANRFAEFGSNQEIAKAAKEGLASDRQLFYVAFDILYVGDTSVIHQSLK
ERHLLLKKVVKSVPGRLDILVPNGGLNLRRAEGEPCSLIVQDANGVERFFKETVENRDEG
IILKDLNSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAE
RSAPNTHPNRFVSFCRVGTGLSDEELDAVVTKLKPYLRKYDYRKKGPPSFYQVTNNAKER
PDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWHECLDIQSFIEL
VHSSNGTMQKANDNALVQEDKPKRAKSSRGSKKNIAIVPSHFIQTDISKVKGETSIFSNL
KFYFVNVPPFQSFDSLHKMVAENGGTFSMNINNSVTHCIAAENKGIKFQAAKHQGDVIHC
SWFFDCCAQKTLLPLQPKYFLFLSDASKKKLEEEIDEFSDSYYLDLNVTDLKQIFNNMVK
VADSQSVEHYKKKYSLREEWVRFLGCCIYFHIPRQFMKNMNHGALLELSMRRMKVEVCIG
GGTVAQSLSHATHLVVICDSKISVDFDILLNSFSEVEKQLLARRRLHIVKSQWLEDCFEK
DEKLPEDSYSLKPRDFQVSLPEDSDQADVSTDEHHISNIGSGEASSHLKDRSKARIPSDK
LRVVSLPSNVEKRKRGRPSGTKTIRGKAAVSQSRRTRPRIGNKPAKICKNESDEDEFVDD
KEEVGVSNIDHTVTQRTQVRGKGRSGFNQPRKTRAQTKCKPVEIGRNESEMVAASEGHAK
EENIQGSRANAETSKTANLISFEFQKKEGEKNSTTEMGDAVEPVAATELSKHAQKFDEVE
SSKGSCSQKNDRDNADPVQAMLFNMFPILASQKVESENPSVYEDFKCRDSEPIRREEKLP
LDEEPAPVVKKKKVSYKDVADELLKDW
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccacgaagttcagtgttatggtcagcttattcaactggatgcagaagagc
aagtcctcctccgtcaagcgttccaaattccgcaagtttctcgacaccttctgccgcccc
aacaacgccgatgactacttcgccgccatccgcttggtcctgccggccctagaccgcgag
cgcggatcctacggcctccgggagcatgtgctcgccacgtgcttaattgatgccgtcgga
atgtcccgtgactctcccgatgctcagcgcctcctcaactggcgcaaaggcggccccaag
tccggtgctttcgccgggaacttctccctcatcgccgcagaggttctacagcggaggcag
gggttgacttctggcggaatgactataaaagaattaaatgatttgcttgaccgcctggcc
tcctctgagaataggtctgaaaagacgtccattctttcggatctgatgcggaaaactaat
gctcaggaaatgaagtggattattatgattattctgaaagatctaaagttaggaataagt
gaaaaaagcatatttcatgaatttcatcctgatgctgaggacttattcaatgtgacttgt
gatctaaaattagtctgtgaaaagttgcgggatcggagtcagcgacacaagaggcaggac
attgaagtgggcaaagcagttcgtccccaacttgctttgagggtcagcaatgcagccact
gcatggaaaaagcttcatggaaaggaagttgttgttgaatgcaaatttgatggtgaccgc
atccaaatccataagaatggaacacagataaatttcttctctaggaattttcttgaccat
caagaatatgagcctggcatgtcacatattataagagagaatgtcctagttgacaggtgt
atcctagatggtgaaatgttagtttgggatgcatctgcaaaccgatttgctgagtttggt
tcaaatcaagaaatagccaaggctgcaaaggaggggcttgccagtgatcgacagttgttc
tatgttgcatttgacattctatatgttggagatacaagtgttattcaccaaagtttgaag
gagagacatctactacttaagaaagttgtcaaatcagtacctggccgtttggatattttg
gttccaaatggtggtcttaacttgcgccgtgctgaaggggagccatgttcactaattgtt
caagatgctaatggtgttgagagattttttaaagaaacagttgagaacagagatgaagga
atcattttgaaagatctcaactcaaaatgggagcctagcgatcgaagtggaaagtggctg
aagttaaaaccagattatattcgagcagggtctgatttagatgttctcataataggaggc
tactatggttctgggcgccgtggaggtgaggtggcacaatttctcgttggccttgcagag
cgatcagcaccaaacacccatcccaatcgatttgtttcattctgcagagttggtacagga
ctctctgatgaggagcttgatgctgttgtcactaaattgaagccctacctgaggaaatat
gactatcgaaagaagggacctccaagtttttatcaagttacaaataatgcaaaggaaaga
cccgatgtttgggttgaaagccctgaaaaatcatttattgtttcaataactagtgatatt
cgaacaataagatccgaggtatttgctgctccatatagcttgagatttccacggattgat
cgagtgagatatgacaaaccttggcatgaatgccttgatattcaatcttttattgagttg
gtgcattcaagtaatggcaccatgcaaaaggcaaatgataatgcacttgtgcaagaagat
aaaccaaaacgtgccaaatcttctagaggatcaaagaagaatattgctattgttccttcc
cactttattcagaccgatatttctaaagttaagggcgaaacatcaatattttctaacctc
aaattctactttgtaaatgtaccaccattccagtcttttgattcactgcataaaatggtg
gctgagaatggtggaactttctcaatgaacataaacaattcggttacacactgtattgca
gctgagaataaagggatcaaatttcaggctgcaaagcaccaaggagatgtgattcattgc
tcgtggttctttgactgttgtgcacagaagacgcttcttccattgcaaccaaagtatttc
ctttttctctctgacgcatccaaaaaaaagctagaagaagaaatagacgagttctctgac
tcctattatttggatcttaatgtgacagatctcaaacagatcttcaacaacatggtcaag
gttgcagattctcaatcagtggagcactacaagaaaaaatatagtttgagggaggagtgg
gttcgctttcttggttgttgcatttacttccacattccaaggcaattcatgaaaaatatg
aaccacggggcacttttggagctttcaatgaggaggatgaaggttgaagtttgcattggt
ggtggcactgtcgcacagtctctttctcatgctactcatctggtagtaatatgtgattca
aaaatctctgtggacttcgacatattattaaatagtttctcggaggttgagaagcaactt
ttagccaggagaaggttacacattgtcaagtcccagtggttggaggattgctttgagaaa
gacgagaagctgccagaggacagttacagtttgaagcctcgtgatttccaagtctcttta
cccgaggacagtgatcaagcagatgtcagtacagatgaacatcatatctcaaacattggc
tcaggggaagcatcctcccatttgaaagacagaagcaaagccaggattccttcggacaag
ctaagggttgttagcttgcctagtaatgttgaaaagaggaaaaggggaagacccagtggg
acaaaaacaataagaggaaaagcagctgtcagtcagtctcgacgaaccaggccacggatc
ggaaacaagccagctaagatatgcaaaaatgagtctgatgaggatgagtttgtagatgat
aaggaagaagttggagtgagcaacatagatcatactgtaactcagaggacacaagttaga
ggaaaaggaagatcaggttttaatcaaccgagaaaaacaagggctcaaaccaaatgcaag
cccgtagagataggcaggaatgaatcggagatggttgcagcttctgaagggcatgctaaa
gaggagaacattcaaggtagcagagctaatgccgagacttctaagactgcaaatttgatc
agttttgaatttcaaaagaaagagggggaaaagaattccacaacagaaatgggtgatgca
gtggagcctgtggcagctacagaacttagcaaacatgcacaaaaatttgatgaagttgaa
tcgagcaaagggagctgtagtcagaagaatgatcgggacaatgctgatccagttcaagct
atgctattcaatatgttcccaattcttgcttcacagaaagttgaaagtgagaacccttcc
gtctacgaagacttcaaatgcagagattctgaacctattcgtagagaggaaaaattacct
ttagatgaagaacccgcacctgttgttaaaaagaaaaaagttagttacaaggatgttgcc
gacgagcttcttaaggattggtga
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integrated database retrieval system