KEGG   Andrographis paniculata: 127264779
Entry
127264779         CDS       T08689                                 
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
apan  Andrographis paniculata
Pathway
apan03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:apan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    127264779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apan03400]
    127264779
Enzymes [BR:apan01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     127264779
DNA repair and recombination proteins [BR:apan03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     127264779
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 BRCT DNA_ligase_A_C PTCB-BRCT DNA_ligase_IV RNA_ligase
Other DBs
NCBI-GeneID: 127264779
NCBI-ProteinID: XP_051150256
LinkDB
Position
Unknown
AA seq 1227 aa
MASATKFSVMVSLFNWMQKSKSSSVKRSKFRKFLDTFCRPNNADDYFAAIRLVLPALDRE
RGSYGLREHVLATCLIDAVGMSRDSPDAQRLLNWRKGGPKSGAFAGNFSLIAAEVLQRRQ
GLTSGGMTIKELNDLLDRLASSENRSEKTSILSDLMRKTNAQEMKWIIMIILKDLKLGIS
EKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKAVRPQLALRVSNAAT
AWKKLHGKEVVVECKFDGDRIQIHKNGTQINFFSRNFLDHQEYEPGMSHIIRENVLVDRC
ILDGEMLVWDASANRFAEFGSNQEIAKAAKEGLASDRQLFYVAFDILYVGDTSVIHQSLK
ERHLLLKKVVKSVPGRLDILVPNGGLNLRRAEGEPCSLIVQDANGVERFFKETVENRDEG
IILKDLNSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAE
RSAPNTHPNRFVSFCRVGTGLSDEELDAVVTKLKPYLRKYDYRKKGPPSFYQVTNNAKER
PDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWHECLDIQSFIEL
VHSSNGTMQKANDNALVQEDKPKRAKSSRGSKKNIAIVPSHFIQTDISKVKGETSIFSNL
KFYFVNVPPFQSFDSLHKMVAENGGTFSMNINNSVTHCIAAENKGIKFQAAKHQGDVIHC
SWFFDCCAQKTLLPLQPKYFLFLSDASKKKLEEEIDEFSDSYYLDLNVTDLKQIFNNMVK
VADSQSVEHYKKKYSLREEWVRFLGCCIYFHIPRQFMKNMNHGALLELSMRRMKVEVCIG
GGTVAQSLSHATHLVVICDSKISVDFDILLNSFSEVEKQLLARRRLHIVKSQWLEDCFEK
DEKLPEDSYSLKPRDFQVSLPEDSDQADVSTDEHHISNIGSGEASSHLKDRSKARIPSDK
LRVVSLPSNVEKRKRGRPSGTKTIRGKAAVSQSRRTRPRIGNKPAKICKNESDEDEFVDD
KEEVGVSNIDHTVTQRTQVRGKGRSGFNQPRKTRAQTKCKPVEIGRNESEMVAASEGHAK
EENIQGSRANAETSKTANLISFEFQKKEGEKNSTTEMGDAVEPVAATELSKHAQKFDEVE
SSKGSCSQKNDRDNADPVQAMLFNMFPILASQKVESENPSVYEDFKCRDSEPIRREEKLP
LDEEPAPVVKKKKVSYKDVADELLKDW
NT seq 3684 nt   +upstreamnt  +downstreamnt
atggcctccgccacgaagttcagtgttatggtcagcttattcaactggatgcagaagagc
aagtcctcctccgtcaagcgttccaaattccgcaagtttctcgacaccttctgccgcccc
aacaacgccgatgactacttcgccgccatccgcttggtcctgccggccctagaccgcgag
cgcggatcctacggcctccgggagcatgtgctcgccacgtgcttaattgatgccgtcgga
atgtcccgtgactctcccgatgctcagcgcctcctcaactggcgcaaaggcggccccaag
tccggtgctttcgccgggaacttctccctcatcgccgcagaggttctacagcggaggcag
gggttgacttctggcggaatgactataaaagaattaaatgatttgcttgaccgcctggcc
tcctctgagaataggtctgaaaagacgtccattctttcggatctgatgcggaaaactaat
gctcaggaaatgaagtggattattatgattattctgaaagatctaaagttaggaataagt
gaaaaaagcatatttcatgaatttcatcctgatgctgaggacttattcaatgtgacttgt
gatctaaaattagtctgtgaaaagttgcgggatcggagtcagcgacacaagaggcaggac
attgaagtgggcaaagcagttcgtccccaacttgctttgagggtcagcaatgcagccact
gcatggaaaaagcttcatggaaaggaagttgttgttgaatgcaaatttgatggtgaccgc
atccaaatccataagaatggaacacagataaatttcttctctaggaattttcttgaccat
caagaatatgagcctggcatgtcacatattataagagagaatgtcctagttgacaggtgt
atcctagatggtgaaatgttagtttgggatgcatctgcaaaccgatttgctgagtttggt
tcaaatcaagaaatagccaaggctgcaaaggaggggcttgccagtgatcgacagttgttc
tatgttgcatttgacattctatatgttggagatacaagtgttattcaccaaagtttgaag
gagagacatctactacttaagaaagttgtcaaatcagtacctggccgtttggatattttg
gttccaaatggtggtcttaacttgcgccgtgctgaaggggagccatgttcactaattgtt
caagatgctaatggtgttgagagattttttaaagaaacagttgagaacagagatgaagga
atcattttgaaagatctcaactcaaaatgggagcctagcgatcgaagtggaaagtggctg
aagttaaaaccagattatattcgagcagggtctgatttagatgttctcataataggaggc
tactatggttctgggcgccgtggaggtgaggtggcacaatttctcgttggccttgcagag
cgatcagcaccaaacacccatcccaatcgatttgtttcattctgcagagttggtacagga
ctctctgatgaggagcttgatgctgttgtcactaaattgaagccctacctgaggaaatat
gactatcgaaagaagggacctccaagtttttatcaagttacaaataatgcaaaggaaaga
cccgatgtttgggttgaaagccctgaaaaatcatttattgtttcaataactagtgatatt
cgaacaataagatccgaggtatttgctgctccatatagcttgagatttccacggattgat
cgagtgagatatgacaaaccttggcatgaatgccttgatattcaatcttttattgagttg
gtgcattcaagtaatggcaccatgcaaaaggcaaatgataatgcacttgtgcaagaagat
aaaccaaaacgtgccaaatcttctagaggatcaaagaagaatattgctattgttccttcc
cactttattcagaccgatatttctaaagttaagggcgaaacatcaatattttctaacctc
aaattctactttgtaaatgtaccaccattccagtcttttgattcactgcataaaatggtg
gctgagaatggtggaactttctcaatgaacataaacaattcggttacacactgtattgca
gctgagaataaagggatcaaatttcaggctgcaaagcaccaaggagatgtgattcattgc
tcgtggttctttgactgttgtgcacagaagacgcttcttccattgcaaccaaagtatttc
ctttttctctctgacgcatccaaaaaaaagctagaagaagaaatagacgagttctctgac
tcctattatttggatcttaatgtgacagatctcaaacagatcttcaacaacatggtcaag
gttgcagattctcaatcagtggagcactacaagaaaaaatatagtttgagggaggagtgg
gttcgctttcttggttgttgcatttacttccacattccaaggcaattcatgaaaaatatg
aaccacggggcacttttggagctttcaatgaggaggatgaaggttgaagtttgcattggt
ggtggcactgtcgcacagtctctttctcatgctactcatctggtagtaatatgtgattca
aaaatctctgtggacttcgacatattattaaatagtttctcggaggttgagaagcaactt
ttagccaggagaaggttacacattgtcaagtcccagtggttggaggattgctttgagaaa
gacgagaagctgccagaggacagttacagtttgaagcctcgtgatttccaagtctcttta
cccgaggacagtgatcaagcagatgtcagtacagatgaacatcatatctcaaacattggc
tcaggggaagcatcctcccatttgaaagacagaagcaaagccaggattccttcggacaag
ctaagggttgttagcttgcctagtaatgttgaaaagaggaaaaggggaagacccagtggg
acaaaaacaataagaggaaaagcagctgtcagtcagtctcgacgaaccaggccacggatc
ggaaacaagccagctaagatatgcaaaaatgagtctgatgaggatgagtttgtagatgat
aaggaagaagttggagtgagcaacatagatcatactgtaactcagaggacacaagttaga
ggaaaaggaagatcaggttttaatcaaccgagaaaaacaagggctcaaaccaaatgcaag
cccgtagagataggcaggaatgaatcggagatggttgcagcttctgaagggcatgctaaa
gaggagaacattcaaggtagcagagctaatgccgagacttctaagactgcaaatttgatc
agttttgaatttcaaaagaaagagggggaaaagaattccacaacagaaatgggtgatgca
gtggagcctgtggcagctacagaacttagcaaacatgcacaaaaatttgatgaagttgaa
tcgagcaaagggagctgtagtcagaagaatgatcgggacaatgctgatccagttcaagct
atgctattcaatatgttcccaattcttgcttcacagaaagttgaaagtgagaacccttcc
gtctacgaagacttcaaatgcagagattctgaacctattcgtagagaggaaaaattacct
ttagatgaagaacccgcacctgttgttaaaaagaaaaaagttagttacaaggatgttgcc
gacgagcttcttaaggattggtga

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